RNA–Protein interactions for RNA: ENST00000560243.5

RABGGTA-216, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5

Gene RABGGTA, Length 704 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-216ENST00000560243 KDM4DQ6B0I6 523 aa9.78□□□□□ -0.84
RABGGTA-216ENST00000560243 LRRN1Q6UXK5 716 aa9.78□□□□□ -0.84
RABGGTA-216ENST00000560243 SLC16A9Q7RTY1 509 aa9.78□□□□□ -0.84
RABGGTA-216ENST00000560243 ZDHHC13Q8IUH4 622 aa9.78□□□□□ -0.84
RABGGTA-216ENST00000560243 C19orf18Q8NEA5 215 aa9.78□□□□□ -0.84
RABGGTA-216ENST00000560243 PYDC1Q8WXC3 89 aa9.78□□□□□ -0.84
RABGGTA-216ENST00000560243 SPSB4Q96A44 273 aa9.78□□□□□ -0.84
RABGGTA-216ENST00000560243 TEAD3Q99594 435 aa9.78□□□□□ -0.84
RABGGTA-216ENST00000560243 CIB1Q99828 191 aa9.78□□□□□ -0.84
RABGGTA-216ENST00000560243 ADAT1Q9BUB4 502 aaKnown RBP9.78□□□□□ -0.84
RABGGTA-216ENST00000560243 GABARAPL1Q9H0R8 117 aa9.78□□□□□ -0.84
RABGGTA-216ENST00000560243 UFSP2Q9NUQ7 469 aa9.78□□□□□ -0.84
RABGGTA-216ENST00000560243 DOCK11Q5JSL3 2073 aa9.78□□□□□ -0.84
RABGGTA-216ENST00000560243 LOC105371242A0A075B767 164 aa9.77□□□□□ -0.85
RABGGTA-216ENST00000560243 SAC3D1A6NKF1 404 aa9.77□□□□□ -0.85
RABGGTA-216ENST00000560243 ZAR1LA6NP61 321 aa9.77□□□□□ -0.85
RABGGTA-216ENST00000560243 CEACAM18A8MTB9 384 aa9.77□□□□□ -0.85
RABGGTA-216ENST00000560243 PSMD9O00233 223 aa9.77□□□□□ -0.85
RABGGTA-216ENST00000560243 FAM20BO75063 409 aa9.77□□□□□ -0.85
RABGGTA-216ENST00000560243 PNPP00491 289 aa9.77□□□□□ -0.85
RABGGTA-216ENST00000560243 LYNP07948 512 aa9.77□□□□□ -0.85
RABGGTA-216ENST00000560243 ANPEPP15144 967 aa9.77□□□□□ -0.85
RABGGTA-216ENST00000560243 ALOX5APP20292 161 aa9.77□□□□□ -0.85
RABGGTA-216ENST00000560243 MDH2P40926 338 aaKnown RBP9.77□□□□□ -0.85
RABGGTA-216ENST00000560243 CD200P41217 278 aa9.77□□□□□ -0.85
RABGGTA-216ENST00000560243 GATA4P43694 442 aa9.77□□□□□ -0.85
RABGGTA-216ENST00000560243 ESRRGP62508 458 aa9.77□□□□□ -0.85
RABGGTA-216ENST00000560243 EFNB1P98172 346 aa9.77□□□□□ -0.85
RABGGTA-216ENST00000560243 FAM3AP98173 230 aa9.77□□□□□ -0.85
RABGGTA-216ENST00000560243 KPNB1Q14974 876 aaKnown RBP9.77□□□□□ -0.85
RABGGTA-216ENST00000560243 TIGD6Q17RP2 521 aa9.77□□□□□ -0.85
RABGGTA-216ENST00000560243 GFOD2Q3B7J2 385 aa9.77□□□□□ -0.85
RABGGTA-216ENST00000560243 TMEM155Q4W5P6 130 aa9.77□□□□□ -0.85
RABGGTA-216ENST00000560243 SLC35D3Q5M8T2 416 aa9.77□□□□□ -0.85
RABGGTA-216ENST00000560243 SLX4IPQ5VYV7 408 aa9.77□□□□□ -0.85
RABGGTA-216ENST00000560243 C12orf73Q69YU5 71 aa9.77□□□□□ -0.85
RABGGTA-216ENST00000560243 KLHL36Q8N4N3 616 aa9.77□□□□□ -0.85
RABGGTA-216ENST00000560243 RFLNBQ8N5W9 214 aa9.77□□□□□ -0.85
RABGGTA-216ENST00000560243 TCEANCQ8N8B7 351 aa9.77□□□□□ -0.85
RABGGTA-216ENST00000560243 ZNF454Q8N9F8 522 aa9.77□□□□□ -0.85
RABGGTA-216ENST00000560243 REEP6Q96HR9 211 aa9.77□□□□□ -0.85
RABGGTA-216ENST00000560243 TEX12Q9BXU0 123 aa9.77□□□□□ -0.85
RABGGTA-216ENST00000560243 TMPRSS13Q9BYE2 586 aa9.77□□□□□ -0.85
RABGGTA-216ENST00000560243 TTTY10Q9BZA0 68 aa9.77□□□□□ -0.85
RABGGTA-216ENST00000560243 TOR3AQ9H497 397 aa9.77□□□□□ -0.85
RABGGTA-216ENST00000560243 METTL17Q9H7H0 456 aaPredicted RBP9.77□□□□□ -0.85
RABGGTA-216ENST00000560243 PATZ1Q9HBE1 687 aaKnown RBP9.77□□□□□ -0.85
RABGGTA-216ENST00000560243 TMEM165Q9HC07 324 aa9.77□□□□□ -0.85
RABGGTA-216ENST00000560243 MMP26Q9NRE1 261 aa9.77□□□□□ -0.85
RABGGTA-216ENST00000560243 OAZ3Q9UMX2 235 aa9.77□□□□□ -0.85
RABGGTA-216ENST00000560243 PCDHB10Q9UN67 800 aa9.77□□□□□ -0.85
RABGGTA-216ENST00000560243 hCG_38984A0A1B0GV85 526 aa9.76□□□□□ -0.85
RABGGTA-216ENST00000560243 RNF212BA8MTL3 300 aa9.76□□□□□ -0.85
RABGGTA-216ENST00000560243 F5H0A9 414 aaPredicted RBP9.76□□□□□ -0.85
RABGGTA-216ENST00000560243 H3BNX3 289 aa9.76□□□□□ -0.85
RABGGTA-216ENST00000560243 TRAPPC2LH3BP13 241 aa9.76□□□□□ -0.85
RABGGTA-216ENST00000560243 XRCC2O43543 280 aa9.76□□□□□ -0.85
RABGGTA-216ENST00000560243 FCGR1AP12314 374 aa9.76□□□□□ -0.85
RABGGTA-216ENST00000560243 ADRA2CP18825 462 aa9.76□□□□□ -0.85
RABGGTA-216ENST00000560243 PCMT1P22061 227 aa9.76□□□□□ -0.85
RABGGTA-216ENST00000560243 THBS2P35442 1172 aa9.76□□□□□ -0.85
RABGGTA-216ENST00000560243 GSK3AP49840 483 aa9.76□□□□□ -0.85
RABGGTA-216ENST00000560243 KRTAP24-1Q3LI83 254 aa9.76□□□□□ -0.85
RABGGTA-216ENST00000560243 AADACL4Q5VUY2 407 aa9.76□□□□□ -0.85
RABGGTA-216ENST00000560243 DCAF12L2Q5VW00 463 aa9.76□□□□□ -0.85
RABGGTA-216ENST00000560243 ZNF826PQ6ZT77 177 aa9.76□□□□□ -0.85
RABGGTA-216ENST00000560243 CCDC121Q6ZUS5 278 aa9.76□□□□□ -0.85
RABGGTA-216ENST00000560243 RHOUQ7L0Q8 258 aa9.76□□□□□ -0.85
RABGGTA-216ENST00000560243 WDR86Q86TI4 376 aa9.76□□□□□ -0.85
RABGGTA-216ENST00000560243 HIST2H2ABQ8IUE6 130 aaPredicted RBP9.76□□□□□ -0.85
RABGGTA-216ENST00000560243 PHC2Q8IXK0 858 aa9.76□□□□□ -0.85
RABGGTA-216ENST00000560243 SPICQ8N5J4 248 aa9.76□□□□□ -0.85
RABGGTA-216ENST00000560243 CELF2-AS1Q8N7Q2 184 aa9.76□□□□□ -0.85
RABGGTA-216ENST00000560243 CENPNQ96H22 339 aaPredicted RBP9.76□□□□□ -0.85
RABGGTA-216ENST00000560243 PGAM5Q96HS1 289 aa9.76□□□□□ -0.85
RABGGTA-216ENST00000560243 IL4I1Q96RQ9 567 aa9.76□□□□□ -0.85
RABGGTA-216ENST00000560243 PKP2Q99959 881 aa9.76□□□□□ -0.85
RABGGTA-216ENST00000560243 TMEM246Q9BRR3 403 aa9.76□□□□□ -0.85
RABGGTA-216ENST00000560243 MRPL15Q9P015 296 aaKnown RBP9.76□□□□□ -0.85
RABGGTA-216ENST00000560243 OPN4Q9UHM6 478 aa9.76□□□□□ -0.85
RABGGTA-216ENST00000560243 LAMP5Q9UJQ1 280 aa9.76□□□□□ -0.85
RABGGTA-216ENST00000560243 COPS3Q9UNS2 423 aa9.76□□□□□ -0.85
RABGGTA-216ENST00000560243 LRP12Q9Y561 859 aa9.76□□□□□ -0.85
RABGGTA-216ENST00000560243 A0A0G2JMP0 313 aa9.75□□□□□ -0.85
RABGGTA-216ENST00000560243 A0A0X1KG70 313 aa9.75□□□□□ -0.85
RABGGTA-216ENST00000560243 LRRC30A6NM36 301 aa9.75□□□□□ -0.85
RABGGTA-216ENST00000560243 IFNL4K9M1U5 179 aa9.75□□□□□ -0.85
RABGGTA-216ENST00000560243 MAGEB4O15481 346 aaPredicted RBP9.75□□□□□ -0.85
RABGGTA-216ENST00000560243 GMDSO60547 372 aa9.75□□□□□ -0.85
RABGGTA-216ENST00000560243 PTBP3O95758 552 aaKnown RBP9.75□□□□□ -0.85
RABGGTA-216ENST00000560243 APOC1P02654 83 aa9.75□□□□□ -0.85
RABGGTA-216ENST00000560243 GRPP07492 148 aa9.75□□□□□ -0.85
RABGGTA-216ENST00000560243 WNT2P09544 360 aa9.75□□□□□ -0.85
RABGGTA-216ENST00000560243 ACKR3P25106 362 aa9.75□□□□□ -0.85
RABGGTA-216ENST00000560243 PSMA6P60900 246 aaKnown RBP9.75□□□□□ -0.85
RABGGTA-216ENST00000560243 ACTR3P61158 418 aa9.75□□□□□ -0.85
RABGGTA-216ENST00000560243 ZNF181Q2M3W8 571 aa9.75□□□□□ -0.85
RABGGTA-216ENST00000560243 LYPD2Q6UXB3 125 aa9.75□□□□□ -0.85
RABGGTA-216ENST00000560243 MEPCEQ7L2J0 689 aaKnown RBP9.75□□□□□ -0.85
RABGGTA-216ENST00000560243 KRT77Q7Z794 578 aa9.75□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms