RNA–Protein interactions for RNA: ENST00000560127.1

RABGGTA-213, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 4

Gene RABGGTA, Length 573 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-213ENST00000560127 FHL1Q13642 323 aa10.45□□□□□ -0.74
RABGGTA-213ENST00000560127 LY6EQ16553 131 aa10.45□□□□□ -0.74
RABGGTA-213ENST00000560127 CRIP3Q6Q6R5 217 aa10.45□□□□□ -0.74
RABGGTA-213ENST00000560127 DUX4L9Q6RFH8 374 aaPredicted RBP10.45□□□□□ -0.74
RABGGTA-213ENST00000560127 NDUFA11Q86Y39 141 aa10.45□□□□□ -0.74
RABGGTA-213ENST00000560127 Q8N7P7 452 aa10.45□□□□□ -0.74
RABGGTA-213ENST00000560127 BEND2Q8NDZ0 799 aa10.45□□□□□ -0.74
RABGGTA-213ENST00000560127 WFDC9Q8NEX5 89 aa10.45□□□□□ -0.74
RABGGTA-213ENST00000560127 SLC26A7Q8TE54 656 aa10.45□□□□□ -0.74
RABGGTA-213ENST00000560127 TNFRSF14Q92956 283 aa10.45□□□□□ -0.74
RABGGTA-213ENST00000560127 TPD52L3Q96J77 140 aa10.45□□□□□ -0.74
RABGGTA-213ENST00000560127 HCAR1Q9BXC0 346 aa10.45□□□□□ -0.74
RABGGTA-213ENST00000560127 RANBP3Q9H6Z4 567 aaPredicted RBP10.45□□□□□ -0.74
RABGGTA-213ENST00000560127 FN3KRPQ9HA64 309 aa10.45□□□□□ -0.74
RABGGTA-213ENST00000560127 TRIM36Q9NQ86 728 aa10.45□□□□□ -0.74
RABGGTA-213ENST00000560127 ADA2Q9NZK5 511 aa10.45□□□□□ -0.74
RABGGTA-213ENST00000560127 KAAG1Q9UBP8 84 aa10.45□□□□□ -0.74
RABGGTA-213ENST00000560127 DUX4Q9UBX2 424 aa10.45□□□□□ -0.74
RABGGTA-213ENST00000560127 ATPIF1Q9UII2 106 aa10.45□□□□□ -0.74
RABGGTA-213ENST00000560127 RIMS3Q9UJD0 308 aa10.45□□□□□ -0.74
RABGGTA-213ENST00000560127 BAG5Q9UL15 447 aa10.45□□□□□ -0.74
RABGGTA-213ENST00000560127 MED31Q9Y3C7 131 aa10.45□□□□□ -0.74
RABGGTA-213ENST00000560127 ARPC2O15144 300 aa10.44□□□□□ -0.74
RABGGTA-213ENST00000560127 OR5F1O95221 314 aa10.44□□□□□ -0.74
RABGGTA-213ENST00000560127 PTBP3O95758 552 aaKnown RBP10.44□□□□□ -0.74
RABGGTA-213ENST00000560127 CTLA4P16410 223 aa10.44□□□□□ -0.74
RABGGTA-213ENST00000560127 ATP6V1B2P21281 511 aa10.44□□□□□ -0.74
RABGGTA-213ENST00000560127 KRTAP10-11P60412 298 aa10.44□□□□□ -0.74
RABGGTA-213ENST00000560127 ELF3P78545 371 aaPredicted RBP10.44□□□□□ -0.74
RABGGTA-213ENST00000560127 CD69Q07108 199 aa10.44□□□□□ -0.74
RABGGTA-213ENST00000560127 GK2Q14410 553 aaPredicted RBP10.44□□□□□ -0.74
RABGGTA-213ENST00000560127 RSPO1Q2MKA7 263 aaPredicted RBP10.44□□□□□ -0.74
RABGGTA-213ENST00000560127 PGBD2Q6P3X8 592 aa10.44□□□□□ -0.74
RABGGTA-213ENST00000560127 COLCA1Q6ZS62 124 aa10.44□□□□□ -0.74
RABGGTA-213ENST00000560127 DEFB107AQ8IZN7 70 aa10.44□□□□□ -0.74
RABGGTA-213ENST00000560127 WIPF2Q8TF74 440 aaPredicted RBP10.44□□□□□ -0.74
RABGGTA-213ENST00000560127 C17orf50Q8WW18 174 aa10.44□□□□□ -0.74
RABGGTA-213ENST00000560127 RASSF5Q8WWW0 418 aa10.44□□□□□ -0.74
RABGGTA-213ENST00000560127 CLPTM1LQ96KA5 538 aa10.44□□□□□ -0.74
RABGGTA-213ENST00000560127 C7orf34Q96L11 122 aa10.44□□□□□ -0.74
RABGGTA-213ENST00000560127 CDRT15Q96T59 188 aa10.44□□□□□ -0.74
RABGGTA-213ENST00000560127 SSX3Q99909 188 aa10.44□□□□□ -0.74
RABGGTA-213ENST00000560127 CITED2Q99967 270 aaPredicted RBP10.44□□□□□ -0.74
RABGGTA-213ENST00000560127 B9D2Q9BPU9 175 aa10.44□□□□□ -0.74
RABGGTA-213ENST00000560127 OCSTAMPQ9BR26 566 aa10.44□□□□□ -0.74
RABGGTA-213ENST00000560127 IGHV3OR15-7A0A075B7D8 119 aa10.43□□□□□ -0.74
RABGGTA-213ENST00000560127 TRAV27A0A087WT01 109 aa10.43□□□□□ -0.74
RABGGTA-213ENST00000560127 TEX13CA0A0J9YWL9 993 aa10.43□□□□□ -0.74
RABGGTA-213ENST00000560127 NDUFAB1O14561 156 aa10.43□□□□□ -0.74
RABGGTA-213ENST00000560127 ZNF682O95780 498 aa10.43□□□□□ -0.74
RABGGTA-213ENST00000560127 CD33P20138 364 aa10.43□□□□□ -0.74
RABGGTA-213ENST00000560127 YAP1P46937 504 aaKnown RBP10.43□□□□□ -0.74
RABGGTA-213ENST00000560127 LSM6P62312 80 aaKnown RBP10.43□□□□□ -0.74
RABGGTA-213ENST00000560127 OR8G1Q15617 311 aa10.43□□□□□ -0.74
RABGGTA-213ENST00000560127 ZNF826PQ6ZT77 177 aa10.43□□□□□ -0.74
RABGGTA-213ENST00000560127 GCSAMQ8N6F7 178 aa10.43□□□□□ -0.74
RABGGTA-213ENST00000560127 OR51A7Q8NH64 312 aa10.43□□□□□ -0.74
RABGGTA-213ENST00000560127 BCAS4Q8TDM0 211 aa10.43□□□□□ -0.74
RABGGTA-213ENST00000560127 RORBQ92753 470 aa10.43□□□□□ -0.74
RABGGTA-213ENST00000560127 BPIFA2Q96DR5 249 aa10.43□□□□□ -0.74
RABGGTA-213ENST00000560127 NSL1Q96IY1 281 aa10.43□□□□□ -0.74
RABGGTA-213ENST00000560127 PRRC1Q96M27 445 aa10.43□□□□□ -0.74
RABGGTA-213ENST00000560127 COQ7Q99807 217 aa10.43□□□□□ -0.74
RABGGTA-213ENST00000560127 SERTAD4Q9NUC0 356 aa10.43□□□□□ -0.74
RABGGTA-213ENST00000560127 DCAF13Q9NV06 445 aaKnown RBP10.43□□□□□ -0.74
RABGGTA-213ENST00000560127 C1orf123Q9NWV4 160 aa10.43□□□□□ -0.74
RABGGTA-213ENST00000560127 RHCGQ9UBD6 479 aa10.43□□□□□ -0.74
RABGGTA-213ENST00000560127 B2RBV5 119 aa10.42□□□□□ -0.74
RABGGTA-213ENST00000560127 CHST1O43916 411 aa10.42□□□□□ -0.74
RABGGTA-213ENST00000560127 IFI30P13284 250 aa10.42□□□□□ -0.74
RABGGTA-213ENST00000560127 CA6P23280 308 aa10.42□□□□□ -0.74
RABGGTA-213ENST00000560127 UBE2E1P51965 193 aa10.42□□□□□ -0.74
RABGGTA-213ENST00000560127 HIST1H3AP68431 136 aa10.42□□□□□ -0.74
RABGGTA-213ENST00000560127 HABP2Q14520 560 aaPredicted RBP10.42□□□□□ -0.74
RABGGTA-213ENST00000560127 KRTAP27-1Q3LI81 207 aa10.42□□□□□ -0.74
RABGGTA-213ENST00000560127 IFI44LQ53G44 452 aa10.42□□□□□ -0.74
RABGGTA-213ENST00000560127 MESTQ5EB52 335 aa10.42□□□□□ -0.74
RABGGTA-213ENST00000560127 SAMD4BQ5PRF9 694 aaKnown RBP10.42□□□□□ -0.74
RABGGTA-213ENST00000560127 HIST2H3PS2Q5TEC6 136 aa10.42□□□□□ -0.74
RABGGTA-213ENST00000560127 TEX36Q5VZQ5 186 aa10.42□□□□□ -0.74
RABGGTA-213ENST00000560127 GLYATQ6IB77 296 aa10.42□□□□□ -0.74
RABGGTA-213ENST00000560127 HIST2H3AQ71DI3 136 aa10.42□□□□□ -0.74
RABGGTA-213ENST00000560127 CMTM4Q8IZR5 234 aa10.42□□□□□ -0.74
RABGGTA-213ENST00000560127 OFCC1Q8IZS5 231 aa10.42□□□□□ -0.74
RABGGTA-213ENST00000560127 PLPP7Q8NBV4 271 aa10.42□□□□□ -0.74
RABGGTA-213ENST00000560127 PAPD5Q8NDF8 572 aaKnown RBP10.42□□□□□ -0.74
RABGGTA-213ENST00000560127 FAM162AQ96A26 154 aa10.42□□□□□ -0.74
RABGGTA-213ENST00000560127 SLC7A6OSQ96CW6 309 aaPredicted RBP10.42□□□□□ -0.74
RABGGTA-213ENST00000560127 AJUBAQ96IF1 538 aa10.42□□□□□ -0.74
RABGGTA-213ENST00000560127 Q96M85 177 aa10.42□□□□□ -0.74
RABGGTA-213ENST00000560127 DMRTB1Q96MA1 342 aa10.42□□□□□ -0.74
RABGGTA-213ENST00000560127 FUZQ9BT04 418 aa10.42□□□□□ -0.74
RABGGTA-213ENST00000560127 POLR2J2Q9GZM3 115 aaKnown RBP10.42□□□□□ -0.74
RABGGTA-213ENST00000560127 POLR2J3Q9H1A7 115 aaKnown RBP10.42□□□□□ -0.74
RABGGTA-213ENST00000560127 GORASP2Q9H8Y8 452 aa10.42□□□□□ -0.74
RABGGTA-213ENST00000560127 TAS2R1Q9NYW7 299 aa10.42□□□□□ -0.74
RABGGTA-213ENST00000560127 COA3Q9Y2R0 106 aaPredicted RBP10.42□□□□□ -0.74
RABGGTA-213ENST00000560127 ADAM18Q9Y3Q7 739 aa10.42□□□□□ -0.74
RABGGTA-213ENST00000560127 TCRBV5S2A0A599 114 aa10.41□□□□□ -0.74
RABGGTA-213ENST00000560127 PRSS37A4D1T9 235 aa10.41□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms