RNA–Protein interactions for RNA: ENST00000560051.1

HMGB3P26-201, Transcript of high mobility group box 3 pseudogene 26, humanhuman

BASIC

Gene HMGB3P26, Length 582 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P26-201ENST00000560051 ASF1AQ9Y294 204 aa3.93□□□□□ -1.78
HMGB3P26-201ENST00000560051 LMTK2Q8IWU2 1503 aa3.93□□□□□ -1.78
HMGB3P26-201ENST00000560051 NSD3Q9BZ95 1437 aa3.93□□□□□ -1.78
HMGB3P26-201ENST00000560051 KIF1BO60333 1816 aa3.93□□□□□ -1.78
HMGB3P26-201ENST00000560051 INO80Q9ULG1 1556 aaPredicted RBP3.93□□□□□ -1.78
HMGB3P26-201ENST00000560051 ASTN1O14525 1302 aa3.93□□□□□ -1.78
HMGB3P26-201ENST00000560051 NUP153P49790 1475 aaKnown RBP3.92□□□□□ -1.78
HMGB3P26-201ENST00000560051 TRAV39A0A0B4J263 110 aa3.92□□□□□ -1.78
HMGB3P26-201ENST00000560051 CENPVL1A0A0U1RR11 272 aa3.92□□□□□ -1.78
HMGB3P26-201ENST00000560051 CENPVL3A0A0U1RRI6 287 aa3.92□□□□□ -1.78
HMGB3P26-201ENST00000560051 C11orf97A0A1B0GVM6 126 aaPredicted RBP3.92□□□□□ -1.78
HMGB3P26-201ENST00000560051 TINCRA0A1B0GVN0 87 aa3.92□□□□□ -1.78
HMGB3P26-201ENST00000560051 TMEM218A2RU14 115 aa3.92□□□□□ -1.78
HMGB3P26-201ENST00000560051 MAP1LC3B2A6NCE7 125 aa3.92□□□□□ -1.78
HMGB3P26-201ENST00000560051 FAM166BA8MTA8 275 aa3.92□□□□□ -1.78
HMGB3P26-201ENST00000560051 A8MVM7 634 aa3.92□□□□□ -1.78
HMGB3P26-201ENST00000560051 CLDN25C9JDP6 229 aa3.92□□□□□ -1.78
HMGB3P26-201ENST00000560051 FABP7O15540 132 aa3.92□□□□□ -1.78
HMGB3P26-201ENST00000560051 XRCC3O43542 346 aa3.92□□□□□ -1.78
HMGB3P26-201ENST00000560051 FOXS1O43638 330 aa3.92□□□□□ -1.78
HMGB3P26-201ENST00000560051 EIF4E2O60573 245 aaKnown RBP3.92□□□□□ -1.78
HMGB3P26-201ENST00000560051 MPDU1O75352 247 aa3.92□□□□□ -1.78
HMGB3P26-201ENST00000560051 PIAS1O75925 651 aa3.92□□□□□ -1.78
HMGB3P26-201ENST00000560051 TOMM40O96008 361 aa3.92□□□□□ -1.78
HMGB3P26-201ENST00000560051 ARG1P05089 322 aa3.92□□□□□ -1.78
HMGB3P26-201ENST00000560051 NGFRP08138 427 aa3.92□□□□□ -1.78
HMGB3P26-201ENST00000560051 UBBP0CG47 229 aa3.92□□□□□ -1.78
HMGB3P26-201ENST00000560051 HOXB2P14652 356 aa3.92□□□□□ -1.78
HMGB3P26-201ENST00000560051 NELFEP18615 380 aaKnown RBP3.92□□□□□ -1.78
HMGB3P26-201ENST00000560051 FGF7P21781 194 aa3.92□□□□□ -1.78
HMGB3P26-201ENST00000560051 APOBEC1P41238 236 aaKnown RBP3.92□□□□□ -1.78
HMGB3P26-201ENST00000560051 LBX1P52954 281 aa3.92□□□□□ -1.78
HMGB3P26-201ENST00000560051 TCL1AP56279 114 aa3.92□□□□□ -1.78
HMGB3P26-201ENST00000560051 CLDN15P56746 228 aa3.92□□□□□ -1.78
HMGB3P26-201ENST00000560051 OR10A3P58181 314 aa3.92□□□□□ -1.78
HMGB3P26-201ENST00000560051 RPS15AP62244 130 aaKnown RBP3.92□□□□□ -1.78
HMGB3P26-201ENST00000560051 RUNX1Q01196 453 aa3.92□□□□□ -1.78
HMGB3P26-201ENST00000560051 TCP10Q12799 353 aa3.92□□□□□ -1.78
HMGB3P26-201ENST00000560051 ZNF235Q14590 738 aa3.92□□□□□ -1.78
HMGB3P26-201ENST00000560051 SLC10A1Q14973 349 aa3.92□□□□□ -1.78
HMGB3P26-201ENST00000560051 ATXN7L3Q14CW9 347 aaPredicted RBP3.92□□□□□ -1.78
HMGB3P26-201ENST00000560051 SPHARQ15513 63 aa3.92□□□□□ -1.78
HMGB3P26-201ENST00000560051 PARP15Q460N3 678 aa3.92□□□□□ -1.78
HMGB3P26-201ENST00000560051 RABL3Q5HYI8 236 aa3.92□□□□□ -1.78
HMGB3P26-201ENST00000560051 FAM102AQ5T9C2 384 aaPredicted RBP3.92□□□□□ -1.78
HMGB3P26-201ENST00000560051 AGBL4Q5VU57 503 aa3.92□□□□□ -1.78
HMGB3P26-201ENST00000560051 DMKNQ6E0U4 476 aaPredicted RBP3.92□□□□□ -1.78
HMGB3P26-201ENST00000560051 OPN5Q6U736 354 aa3.92□□□□□ -1.78
HMGB3P26-201ENST00000560051 SCIMPQ6UWF3 145 aa3.92□□□□□ -1.78
HMGB3P26-201ENST00000560051 DHRS11Q6UWP2 260 aa3.92□□□□□ -1.78
HMGB3P26-201ENST00000560051 CASP12Q6UXS9 341 aa3.92□□□□□ -1.78
HMGB3P26-201ENST00000560051 CEACAM20Q6UY09 585 aa3.92□□□□□ -1.78
HMGB3P26-201ENST00000560051 ZNF517Q6ZMY9 492 aaPredicted RBP3.92□□□□□ -1.78
HMGB3P26-201ENST00000560051 LANCL3Q6ZV70 420 aa3.92□□□□□ -1.78
HMGB3P26-201ENST00000560051 BCDIN3DQ7Z5W3 292 aaKnown RBP3.92□□□□□ -1.78
HMGB3P26-201ENST00000560051 TMPRSS12Q86WS5 348 aa3.92□□□□□ -1.78
HMGB3P26-201ENST00000560051 CHSY1Q86X52 802 aa3.92□□□□□ -1.78
HMGB3P26-201ENST00000560051 SLC35F2Q8IXU6 374 aa3.92□□□□□ -1.78
HMGB3P26-201ENST00000560051 H1FOOQ8IZA3 346 aaPredicted RBP3.92□□□□□ -1.78
HMGB3P26-201ENST00000560051 TCTE3Q8IZS6 198 aa3.92□□□□□ -1.78
HMGB3P26-201ENST00000560051 CLIP4Q8N3C7 705 aa3.92□□□□□ -1.78
HMGB3P26-201ENST00000560051 STPG3Q8N7X2 389 aa3.92□□□□□ -1.78
HMGB3P26-201ENST00000560051 BEST4Q8NFU0 473 aa3.92□□□□□ -1.78
HMGB3P26-201ENST00000560051 OR5M3Q8NGP4 307 aa3.92□□□□□ -1.78
HMGB3P26-201ENST00000560051 OR1J2Q8NGS2 313 aa3.92□□□□□ -1.78
HMGB3P26-201ENST00000560051 OR6F1Q8NGZ6 308 aa3.92□□□□□ -1.78
HMGB3P26-201ENST00000560051 GPR119Q8TDV5 335 aa3.92□□□□□ -1.78
HMGB3P26-201ENST00000560051 SAP25Q8TEE9 199 aa3.92□□□□□ -1.78
HMGB3P26-201ENST00000560051 LRRC15Q8TF66 581 aa3.92□□□□□ -1.78
HMGB3P26-201ENST00000560051 XAGE5Q8WWM1 108 aa3.92□□□□□ -1.78
HMGB3P26-201ENST00000560051 UBE2E3Q969T4 207 aa3.92□□□□□ -1.78
HMGB3P26-201ENST00000560051 MRPL53Q96EL3 112 aaKnown RBP3.92□□□□□ -1.78
HMGB3P26-201ENST00000560051 ZC3HAV1LQ96H79 300 aaKnown RBP3.92□□□□□ -1.78
HMGB3P26-201ENST00000560051 FRG2BQ96QU4 278 aa3.92□□□□□ -1.78
HMGB3P26-201ENST00000560051 CLCC1Q96S66 551 aa3.92□□□□□ -1.78
HMGB3P26-201ENST00000560051 CDX2Q99626 313 aaPredicted RBP3.92□□□□□ -1.78
HMGB3P26-201ENST00000560051 ABHD14AQ9BUJ0 271 aa3.92□□□□□ -1.78
HMGB3P26-201ENST00000560051 MLST8Q9BVC4 326 aa3.92□□□□□ -1.78
HMGB3P26-201ENST00000560051 DPCDQ9BVM2 203 aaPredicted RBP3.92□□□□□ -1.78
HMGB3P26-201ENST00000560051 RSPO3Q9BXY4 272 aaPredicted RBP3.92□□□□□ -1.78
HMGB3P26-201ENST00000560051 MAP1LC3BQ9GZQ8 125 aa3.92□□□□□ -1.78
HMGB3P26-201ENST00000560051 PRORYQ9H606 182 aa3.92□□□□□ -1.78
HMGB3P26-201ENST00000560051 RNF122Q9H9V4 155 aa3.92□□□□□ -1.78
HMGB3P26-201ENST00000560051 DLL4Q9NR61 685 aa3.92□□□□□ -1.78
HMGB3P26-201ENST00000560051 SLC17A5Q9NRA2 495 aa3.92□□□□□ -1.78
HMGB3P26-201ENST00000560051 TMEM38BQ9NVV0 291 aa3.92□□□□□ -1.78
HMGB3P26-201ENST00000560051 FAM206AQ9NX38 181 aa3.92□□□□□ -1.78
HMGB3P26-201ENST00000560051 PACSIN3Q9UKS6 424 aa3.92□□□□□ -1.78
HMGB3P26-201ENST00000560051 TRAPPC2LQ9UL33 140 aa3.92□□□□□ -1.78
HMGB3P26-201ENST00000560051 SNX12Q9UMY4 172 aa3.92□□□□□ -1.78
HMGB3P26-201ENST00000560051 TRAPPC4Q9Y296 219 aa3.92□□□□□ -1.78
HMGB3P26-201ENST00000560051 TMED7Q9Y3B3 224 aa3.92□□□□□ -1.78
HMGB3P26-201ENST00000560051 TROQ12816 1431 aaPredicted RBP3.92□□□□□ -1.78
HMGB3P26-201ENST00000560051 MYH10P35580 1976 aa3.92□□□□□ -1.78
HMGB3P26-201ENST00000560051 SETD1AO15047 1707 aaKnown RBP3.92□□□□□ -1.78
HMGB3P26-201ENST00000560051 NEDD4P46934 1319 aa3.92□□□□□ -1.78
HMGB3P26-201ENST00000560051 ZNF608Q9ULD9 1512 aaPredicted RBP3.91□□□□□ -1.78
HMGB3P26-201ENST00000560051 TRAV30A0A087WSZ9 112 aa3.91□□□□□ -1.78
HMGB3P26-201ENST00000560051 KIR2DS5A0A0G2JLQ3 304 aa3.91□□□□□ -1.78
HMGB3P26-201ENST00000560051 PRAMEF33A0A0G2JMD5 474 aa3.91□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms