RNA–Protein interactions for RNA: ENST00000559873.5

USP3-216, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 5

Gene USP3, Length 584 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-216ENST00000559873 CELSR2Q9HCU4 2923 aa8.62□□□□□ -1.03
USP3-216ENST00000559873 hCG_38984A0A1B0GV85 526 aa8.62□□□□□ -1.03
USP3-216ENST00000559873 A0A1B0GVI7 797 aa8.62□□□□□ -1.03
USP3-216ENST00000559873 ANKRD30BLA7E2S9 258 aa8.62□□□□□ -1.03
USP3-216ENST00000559873 C17orf100A8MU93 164 aa8.62□□□□□ -1.03
USP3-216ENST00000559873 PTGES3LE9PB15 166 aa8.62□□□□□ -1.03
USP3-216ENST00000559873 OVOL3O00110 214 aa8.62□□□□□ -1.03
USP3-216ENST00000559873 CLPTM1O96005 669 aa8.62□□□□□ -1.03
USP3-216ENST00000559873 CD8AP01732 235 aa8.62□□□□□ -1.03
USP3-216ENST00000559873 CDK1P06493 297 aa8.62□□□□□ -1.03
USP3-216ENST00000559873 LIMS3P0CW19 117 aa8.62□□□□□ -1.03
USP3-216ENST00000559873 LIMS4P0CW20 117 aa8.62□□□□□ -1.03
USP3-216ENST00000559873 PAX1P15863 534 aa8.62□□□□□ -1.03
USP3-216ENST00000559873 CRHBPP24387 322 aa8.62□□□□□ -1.03
USP3-216ENST00000559873 GNALP38405 381 aa8.62□□□□□ -1.03
USP3-216ENST00000559873 ALDH3B1P43353 468 aa8.62□□□□□ -1.03
USP3-216ENST00000559873 ZNF81P51508 661 aa8.62□□□□□ -1.03
USP3-216ENST00000559873 ATP5J2P56134 94 aa8.62□□□□□ -1.03
USP3-216ENST00000559873 OR12D2P58182 307 aa8.62□□□□□ -1.03
USP3-216ENST00000559873 GABARAPL2P60520 117 aa8.62□□□□□ -1.03
USP3-216ENST00000559873 SLC35A2P78381 396 aa8.62□□□□□ -1.03
USP3-216ENST00000559873 ZNF92Q03936 586 aa8.62□□□□□ -1.03
USP3-216ENST00000559873 MFGE8Q08431 387 aaPredicted RBP8.62□□□□□ -1.03
USP3-216ENST00000559873 MZT1Q08AG7 82 aa8.62□□□□□ -1.03
USP3-216ENST00000559873 MSMPQ1L6U9 139 aa8.62□□□□□ -1.03
USP3-216ENST00000559873 RNLSQ5VYX0 342 aa8.62□□□□□ -1.03
USP3-216ENST00000559873 OR2T2Q6IF00 324 aa8.62□□□□□ -1.03
USP3-216ENST00000559873 LAIR2Q6ISS4 152 aa8.62□□□□□ -1.03
USP3-216ENST00000559873 NAA40Q86UY6 237 aa8.62□□□□□ -1.03
USP3-216ENST00000559873 LRP11Q86VZ4 500 aa8.62□□□□□ -1.03
USP3-216ENST00000559873 CATSPERDQ86XM0 798 aa8.62□□□□□ -1.03
USP3-216ENST00000559873 ELMOD2Q8IZ81 293 aa8.62□□□□□ -1.03
USP3-216ENST00000559873 OR8G5Q8NG78 346 aa8.62□□□□□ -1.03
USP3-216ENST00000559873 IGFBPL1Q8WX77 278 aa8.62□□□□□ -1.03
USP3-216ENST00000559873 RORBQ92753 470 aa8.62□□□□□ -1.03
USP3-216ENST00000559873 SGK3Q96BR1 496 aa8.62□□□□□ -1.03
USP3-216ENST00000559873 RHNO1Q9BSD3 238 aa8.62□□□□□ -1.03
USP3-216ENST00000559873 REPIN1Q9BWE0 567 aaKnown RBP8.62□□□□□ -1.03
USP3-216ENST00000559873 MND1Q9BWT6 205 aa8.62□□□□□ -1.03
USP3-216ENST00000559873 YTHDF1Q9BYJ9 559 aaKnown RBP8.62□□□□□ -1.03
USP3-216ENST00000559873 EGLN1Q9GZT9 426 aa8.62□□□□□ -1.03
USP3-216ENST00000559873 COMMD4Q9H0A8 199 aa8.62□□□□□ -1.03
USP3-216ENST00000559873 POFUT1Q9H488 388 aa8.62□□□□□ -1.03
USP3-216ENST00000559873 PLEKHA1Q9HB21 404 aa8.62□□□□□ -1.03
USP3-216ENST00000559873 ABCB9Q9NP78 766 aa8.62□□□□□ -1.03
USP3-216ENST00000559873 MYOZ1Q9NP98 299 aaPredicted RBP8.62□□□□□ -1.03
USP3-216ENST00000559873 G6PC2Q9NQR9 355 aa8.62□□□□□ -1.03
USP3-216ENST00000559873 GPR84Q9NQS5 396 aa8.62□□□□□ -1.03
USP3-216ENST00000559873 FKBP14Q9NWM8 211 aa8.62□□□□□ -1.03
USP3-216ENST00000559873 MRPL15Q9P015 296 aaKnown RBP8.62□□□□□ -1.03
USP3-216ENST00000559873 OR52A1Q9UKL2 312 aa8.62□□□□□ -1.03
USP3-216ENST00000559873 USF3Q68DE3 2245 aa8.61□□□□□ -1.03
USP3-216ENST00000559873 CREBBPQ92793 2442 aa8.61□□□□□ -1.03
USP3-216ENST00000559873 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP8.61□□□□□ -1.03
USP3-216ENST00000559873 LOC390937A0A1W2PQ73 354 aa8.61□□□□□ -1.03
USP3-216ENST00000559873 DHRS7CA6NNS2 312 aa8.61□□□□□ -1.03
USP3-216ENST00000559873 CD300LBA8K4G0 201 aa8.61□□□□□ -1.03
USP3-216ENST00000559873 MAGEB4O15481 346 aaPredicted RBP8.61□□□□□ -1.03
USP3-216ENST00000559873 TPD52L2O43399 206 aaKnown RBP8.61□□□□□ -1.03
USP3-216ENST00000559873 MRPS14O60783 128 aaKnown RBP8.61□□□□□ -1.03
USP3-216ENST00000559873 SRSF10O75494 262 aaKnown RBP8.61□□□□□ -1.03
USP3-216ENST00000559873 DHRS3O75911 302 aa8.61□□□□□ -1.03
USP3-216ENST00000559873 TTRP02766 147 aa8.61□□□□□ -1.03
USP3-216ENST00000559873 ADRA2AP08913 450 aa8.61□□□□□ -1.03
USP3-216ENST00000559873 CSF3P09919 207 aa8.61□□□□□ -1.03
USP3-216ENST00000559873 PSMB10P40306 273 aa8.61□□□□□ -1.03
USP3-216ENST00000559873 MAP2K3P46734 347 aa8.61□□□□□ -1.03
USP3-216ENST00000559873 PTH2RP49190 550 aa8.61□□□□□ -1.03
USP3-216ENST00000559873 TGM4P49221 684 aa8.61□□□□□ -1.03
USP3-216ENST00000559873 MMP15P51511 669 aa8.61□□□□□ -1.03
USP3-216ENST00000559873 CCR9P51686 369 aa8.61□□□□□ -1.03
USP3-216ENST00000559873 EFNA4P52798 201 aa8.61□□□□□ -1.03
USP3-216ENST00000559873 WNT4P56705 351 aa8.61□□□□□ -1.03
USP3-216ENST00000559873 FAM3AP98173 230 aa8.61□□□□□ -1.03
USP3-216ENST00000559873 TESK1Q15569 626 aa8.61□□□□□ -1.03
USP3-216ENST00000559873 OR8B8Q15620 311 aa8.61□□□□□ -1.03
USP3-216ENST00000559873 MST1LQ2TV78 715 aa8.61□□□□□ -1.03
USP3-216ENST00000559873 ALKBH6Q3KRA9 238 aa8.61□□□□□ -1.03
USP3-216ENST00000559873 CCDC58Q4VC31 144 aa8.61□□□□□ -1.03
USP3-216ENST00000559873 ZBTB37Q5TC79 503 aa8.61□□□□□ -1.03
USP3-216ENST00000559873 TMEM244Q5VVB8 128 aa8.61□□□□□ -1.03
USP3-216ENST00000559873 FDX2Q6P4F2 183 aa8.61□□□□□ -1.03
USP3-216ENST00000559873 DOK3Q7L591 496 aa8.61□□□□□ -1.03
USP3-216ENST00000559873 PRSS48Q7RTY5 328 aa8.61□□□□□ -1.03
USP3-216ENST00000559873 OR5AS1Q8N127 324 aa8.61□□□□□ -1.03
USP3-216ENST00000559873 BHLHE23Q8NDY6 225 aa8.61□□□□□ -1.03
USP3-216ENST00000559873 SEMA6DQ8NFY4 1073 aa8.61□□□□□ -1.03
USP3-216ENST00000559873 OR56B2PQ8NGI1 322 aa8.61□□□□□ -1.03
USP3-216ENST00000559873 OR13G1Q8NGZ3 307 aa8.61□□□□□ -1.03
USP3-216ENST00000559873 OR2G2Q8NGZ5 317 aa8.61□□□□□ -1.03
USP3-216ENST00000559873 PELI1Q96FA3 418 aa8.61□□□□□ -1.03
USP3-216ENST00000559873 PERPQ96FX8 193 aa8.61□□□□□ -1.03
USP3-216ENST00000559873 FOXC2Q99958 501 aa8.61□□□□□ -1.03
USP3-216ENST00000559873 CDCA4Q9BXL8 241 aa8.61□□□□□ -1.03
USP3-216ENST00000559873 CCDC90BQ9GZT6 254 aa8.61□□□□□ -1.03
USP3-216ENST00000559873 DUSP21Q9H596 190 aa8.61□□□□□ -1.03
USP3-216ENST00000559873 DECR2Q9NUI1 292 aa8.61□□□□□ -1.03
USP3-216ENST00000559873 TMEM100Q9NV29 134 aa8.61□□□□□ -1.03
USP3-216ENST00000559873 ZNF701Q9NV72 531 aaPredicted RBP8.61□□□□□ -1.03
USP3-216ENST00000559873 NKIRAS2Q9NYR9 191 aa8.61□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms