RNA–Protein interactions for RNA: ENST00000559389.1

SNX1-206, Transcript of sorting nexin 1, humanhuman

TSL 5

Gene SNX1, Length 753 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-206ENST00000559389 FDX2Q6P4F2 183 aa18.5■□□□□ 0.55
SNX1-206ENST00000559389 CATSPERDQ86XM0 798 aa18.5■□□□□ 0.55
SNX1-206ENST00000559389 ELMOD2Q8IZ81 293 aa18.5■□□□□ 0.55
SNX1-206ENST00000559389 LRRC75A-AS1Q8N1F1 130 aa18.5■□□□□ 0.55
SNX1-206ENST00000559389 STX19Q8N4C7 294 aa18.5■□□□□ 0.55
SNX1-206ENST00000559389 TRMT61AQ96FX7 289 aaKnown RBP18.5■□□□□ 0.55
SNX1-206ENST00000559389 PERPQ96FX8 193 aa18.5■□□□□ 0.55
SNX1-206ENST00000559389 LYZL4Q96KX0 146 aa18.5■□□□□ 0.55
SNX1-206ENST00000559389 MS4A5Q9H3V2 200 aa18.5■□□□□ 0.55
SNX1-206ENST00000559389 ISG20L2Q9H9L3 353 aaKnown RBP18.5■□□□□ 0.55
SNX1-206ENST00000559389 UBAP1Q9NZ09 502 aa18.5■□□□□ 0.55
SNX1-206ENST00000559389 GTF2A1LQ9UNN4 478 aa18.5■□□□□ 0.55
SNX1-206ENST00000559389 CAB39Q9Y376 341 aaPredicted RBP18.5■□□□□ 0.55
SNX1-206ENST00000559389 TPRKBQ9Y3C4 175 aa18.5■□□□□ 0.55
SNX1-206ENST00000559389 PLSCR5A0PG75 271 aa18.49■□□□□ 0.55
SNX1-206ENST00000559389 CD300LBA8K4G0 201 aa18.49■□□□□ 0.55
SNX1-206ENST00000559389 C17orf100A8MU93 164 aa18.49■□□□□ 0.55
SNX1-206ENST00000559389 NDUFS7O75251 213 aa18.49■□□□□ 0.55
SNX1-206ENST00000559389 CDK1P06493 297 aa18.49■□□□□ 0.55
SNX1-206ENST00000559389 CRHBPP24387 322 aa18.49■□□□□ 0.55
SNX1-206ENST00000559389 LIPAP38571 399 aa18.49■□□□□ 0.55
SNX1-206ENST00000559389 ZNF81P51508 661 aa18.49■□□□□ 0.55
SNX1-206ENST00000559389 FAM3AP98173 230 aa18.49■□□□□ 0.55
SNX1-206ENST00000559389 WDR38Q5JTN6 314 aa18.49■□□□□ 0.55
SNX1-206ENST00000559389 OR5AS1Q8N127 324 aa18.49■□□□□ 0.55
SNX1-206ENST00000559389 ZNF786Q8N393 782 aa18.49■□□□□ 0.55
SNX1-206ENST00000559389 KLHL36Q8N4N3 616 aa18.49■□□□□ 0.55
SNX1-206ENST00000559389 BHLHE23Q8NDY6 225 aa18.49■□□□□ 0.55
SNX1-206ENST00000559389 OR56B2PQ8NGI1 322 aa18.49■□□□□ 0.55
SNX1-206ENST00000559389 PPP1R14AQ96A00 147 aa18.49■□□□□ 0.55
SNX1-206ENST00000559389 VRK1Q99986 396 aaPredicted RBP18.49■□□□□ 0.55
SNX1-206ENST00000559389 TPK1Q9H3S4 243 aa18.49■□□□□ 0.55
SNX1-206ENST00000559389 CLEC2DQ9UHP7 191 aa18.49■□□□□ 0.55
SNX1-206ENST00000559389 SLC22A13Q9Y226 551 aa18.49■□□□□ 0.55
SNX1-206ENST00000559389 GGT3PA6NGU5 568 aa18.48■□□□□ 0.55
SNX1-206ENST00000559389 LILRA1O75019 489 aa18.48■□□□□ 0.55
SNX1-206ENST00000559389 IGHV4-39P01824 125 aa18.48■□□□□ 0.55
SNX1-206ENST00000559389 ADH4P08319 380 aa18.48■□□□□ 0.55
SNX1-206ENST00000559389 C21orf33P30042 268 aaPredicted RBP18.48■□□□□ 0.55
SNX1-206ENST00000559389 KIR3DL2P43630 455 aa18.48■□□□□ 0.55
SNX1-206ENST00000559389 ATP5J2P56134 94 aa18.48■□□□□ 0.55
SNX1-206ENST00000559389 MRPL28Q13084 256 aaKnown RBP18.48■□□□□ 0.55
SNX1-206ENST00000559389 OR8B8Q15620 311 aa18.48■□□□□ 0.55
SNX1-206ENST00000559389 RBM48Q5RL73 367 aaKnown RBP18.48■□□□□ 0.55
SNX1-206ENST00000559389 OR2G6Q5TZ20 316 aa18.48■□□□□ 0.55
SNX1-206ENST00000559389 Q6ZR03 302 aa18.48■□□□□ 0.55
SNX1-206ENST00000559389 ZCCHC24Q8N2G6 241 aaKnown RBP18.48■□□□□ 0.55
SNX1-206ENST00000559389 PRSS35Q8N3Z0 413 aa18.48■□□□□ 0.55
SNX1-206ENST00000559389 OR8G5Q8NG78 346 aa18.48■□□□□ 0.55
SNX1-206ENST00000559389 OR2G2Q8NGZ5 317 aa18.48■□□□□ 0.55
SNX1-206ENST00000559389 OR52N1Q8NH53 320 aa18.48■□□□□ 0.55
SNX1-206ENST00000559389 SPRYD4Q8WW59 207 aaPredicted RBP18.48■□□□□ 0.55
SNX1-206ENST00000559389 SGCDQ92629 289 aa18.48■□□□□ 0.55
SNX1-206ENST00000559389 MYDGFQ969H8 173 aa18.48■□□□□ 0.55
SNX1-206ENST00000559389 FOXC2Q99958 501 aa18.48■□□□□ 0.55
SNX1-206ENST00000559389 DUSP21Q9H596 190 aa18.48■□□□□ 0.55
SNX1-206ENST00000559389 MSL2Q9HCI7 577 aa18.48■□□□□ 0.55
SNX1-206ENST00000559389 ANKRD17O75179 2603 aaKnown RBP18.47■□□□□ 0.55
SNX1-206ENST00000559389 SPG11Q96JI7 2443 aa18.47■□□□□ 0.55
SNX1-206ENST00000559389 A0A1B0GWJ7 208 aa18.47■□□□□ 0.55
SNX1-206ENST00000559389 PTGES3LE9PB15 166 aa18.47■□□□□ 0.55
SNX1-206ENST00000559389 GSK3AP49840 483 aa18.47■□□□□ 0.55
SNX1-206ENST00000559389 NANOS3P60323 173 aaKnown RBP18.47■□□□□ 0.55
SNX1-206ENST00000559389 TNK1Q13470 666 aa18.47■□□□□ 0.55
SNX1-206ENST00000559389 TMPRSS11AQ6ZMR5 421 aa18.47■□□□□ 0.55
SNX1-206ENST00000559389 OR51E1Q8TCB6 317 aa18.47■□□□□ 0.55
SNX1-206ENST00000559389 HAVCR2Q8TDQ0 301 aa18.47■□□□□ 0.55
SNX1-206ENST00000559389 SLC30A2Q9BRI3 323 aa18.47■□□□□ 0.55
SNX1-206ENST00000559389 SOX7Q9BT81 388 aa18.47■□□□□ 0.55
SNX1-206ENST00000559389 RAB1BQ9H0U4 201 aa18.47■□□□□ 0.55
SNX1-206ENST00000559389 BARX1Q9HBU1 254 aaPredicted RBP18.47■□□□□ 0.55
SNX1-206ENST00000559389 GPR84Q9NQS5 396 aa18.47■□□□□ 0.55
SNX1-206ENST00000559389 CHCHD3Q9NX63 227 aaKnown RBP18.47■□□□□ 0.55
SNX1-206ENST00000559389 POLQO75417 2590 aa18.47■□□□□ 0.55
SNX1-206ENST00000559389 IGHV1-46P01743 117 aa18.46■□□□□ 0.55
SNX1-206ENST00000559389 ERCC1P07992 297 aaPredicted RBP18.46■□□□□ 0.55
SNX1-206ENST00000559389 HTR1AP08908 422 aa18.46■□□□□ 0.55
SNX1-206ENST00000559389 DDOSTP39656 456 aa18.46■□□□□ 0.55
SNX1-206ENST00000559389 EFNA4P52798 201 aa18.46■□□□□ 0.55
SNX1-206ENST00000559389 PCGF3Q3KNV8 242 aa18.46■□□□□ 0.55
SNX1-206ENST00000559389 COMMD2Q86X83 199 aa18.46■□□□□ 0.55
SNX1-206ENST00000559389 ZNF485Q8NCK3 441 aa18.46■□□□□ 0.55
SNX1-206ENST00000559389 NEU4Q8WWR8 484 aaPredicted RBP18.46■□□□□ 0.55
SNX1-206ENST00000559389 CDCA4Q9BXL8 241 aa18.46■□□□□ 0.55
SNX1-206ENST00000559389 CXXC4Q9H2H0 198 aa18.46■□□□□ 0.55
SNX1-206ENST00000559389 NKIRAS2Q9NYR9 191 aa18.46■□□□□ 0.55
SNX1-206ENST00000559389 FRRS1LQ9P0K9 344 aa18.46■□□□□ 0.55
SNX1-206ENST00000559389 BLOC1S6Q9UL45 172 aa18.46■□□□□ 0.55
SNX1-206ENST00000559389 PDZD2O15018 2839 aa18.46■□□□□ 0.55
SNX1-206ENST00000559389 ITPR2Q14571 2701 aa18.45■□□□□ 0.54
SNX1-206ENST00000559389 A0A1B0GTI1 187 aa18.45■□□□□ 0.54
SNX1-206ENST00000559389 E9PI62 339 aa18.45■□□□□ 0.54
SNX1-206ENST00000559389 SPRY3O43610 288 aa18.45■□□□□ 0.54
SNX1-206ENST00000559389 CCL1P22362 96 aa18.45■□□□□ 0.54
SNX1-206ENST00000559389 ACKR3P25106 362 aa18.45■□□□□ 0.54
SNX1-206ENST00000559389 TGM4P49221 684 aa18.45■□□□□ 0.54
SNX1-206ENST00000559389 CCR9P51686 369 aa18.45■□□□□ 0.54
SNX1-206ENST00000559389 GBX2P52951 348 aaPredicted RBP18.45■□□□□ 0.54
SNX1-206ENST00000559389 RNLSQ5VYX0 342 aa18.45■□□□□ 0.54
SNX1-206ENST00000559389 PLPP7Q8NBV4 271 aa18.45■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms