RNA–Protein interactions for RNA: ENST00000558958.1

CLPX-203, Transcript of caseinolytic mitochondrial matrix peptidase chaperone subunit, humanhuman

TSL 1 (best)

Gene CLPX, Length 1,493 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPX-203ENST00000558958 FGF9P31371 208 aaPredicted RBP15.58■□□□□ 0.08
CLPX-203ENST00000558958 MAGEB1P43366 347 aa15.58■□□□□ 0.08
CLPX-203ENST00000558958 PPP1CBP62140 327 aa15.58■□□□□ 0.08
CLPX-203ENST00000558958 SPOCK1Q08629 439 aa15.58■□□□□ 0.08
CLPX-203ENST00000558958 GK2Q14410 553 aaPredicted RBP15.58■□□□□ 0.08
CLPX-203ENST00000558958 NCMAPQ5T1S8 102 aa15.58■□□□□ 0.08
CLPX-203ENST00000558958 SSC4DQ8WTU2 575 aa15.58■□□□□ 0.08
CLPX-203ENST00000558958 FAM71F1Q96KD3 344 aaPredicted RBP15.58■□□□□ 0.08
CLPX-203ENST00000558958 OR14A2Q96R54 314 aa15.58■□□□□ 0.08
CLPX-203ENST00000558958 REPIN1Q9BWE0 567 aaKnown RBP15.58■□□□□ 0.08
CLPX-203ENST00000558958 BCL2L14Q9BZR8 327 aa15.58■□□□□ 0.08
CLPX-203ENST00000558958 ESRP2Q9H6T0 727 aaKnown RBP15.58■□□□□ 0.08
CLPX-203ENST00000558958 EXOSC4Q9NPD3 245 aaKnown RBP15.58■□□□□ 0.08
CLPX-203ENST00000558958 PTTG3PQ9NZH4 202 aa15.58■□□□□ 0.08
CLPX-203ENST00000558958 HEATR1Q9H583 2144 aaKnown RBP15.57■□□□□ 0.08
CLPX-203ENST00000558958 LOC100506127A0A0U1RQW1 187 aa15.57■□□□□ 0.08
CLPX-203ENST00000558958 LOC390937A0A1W2PQ73 354 aa15.57■□□□□ 0.08
CLPX-203ENST00000558958 CLEC18AA5D8T8 446 aa15.57■□□□□ 0.08
CLPX-203ENST00000558958 ATP6V1G2-DDX39BF2Z307 99 aa15.57■□□□□ 0.08
CLPX-203ENST00000558958 ABCD4O14678 606 aa15.57■□□□□ 0.08
CLPX-203ENST00000558958 GATBO75879 557 aaKnown RBP15.57■□□□□ 0.08
CLPX-203ENST00000558958 TUBG1P23258 451 aa15.57■□□□□ 0.08
CLPX-203ENST00000558958 CFL1P23528 166 aaKnown RBP15.57■□□□□ 0.08
CLPX-203ENST00000558958 KIR2DL3P43628 341 aa15.57■□□□□ 0.08
CLPX-203ENST00000558958 CTF1Q16619 201 aa15.57■□□□□ 0.08
CLPX-203ENST00000558958 ZMAT1Q5H9K5 638 aa15.57■□□□□ 0.08
CLPX-203ENST00000558958 CLEC18BQ6UXF7 455 aa15.57■□□□□ 0.08
CLPX-203ENST00000558958 CEACAM19Q7Z692 300 aa15.57■□□□□ 0.08
CLPX-203ENST00000558958 C1orf174Q8IYL3 243 aa15.57■□□□□ 0.08
CLPX-203ENST00000558958 CLEC18CQ8NCF0 446 aa15.57■□□□□ 0.08
CLPX-203ENST00000558958 CCDC54Q8NEL0 328 aa15.57■□□□□ 0.08
CLPX-203ENST00000558958 OR1J1Q8NGS3 322 aa15.57■□□□□ 0.08
CLPX-203ENST00000558958 OR13C3Q8NGS6 347 aa15.57■□□□□ 0.08
CLPX-203ENST00000558958 ZNF420Q8TAQ5 688 aaPredicted RBP15.57■□□□□ 0.08
CLPX-203ENST00000558958 RAB2BQ8WUD1 216 aa15.57■□□□□ 0.08
CLPX-203ENST00000558958 TSEN15Q8WW01 171 aaKnown RBP15.57■□□□□ 0.08
CLPX-203ENST00000558958 CENPOQ9BU64 300 aa15.57■□□□□ 0.08
CLPX-203ENST00000558958 OPA3Q9H6K4 179 aa15.57■□□□□ 0.08
CLPX-203ENST00000558958 TUBG2Q9NRH3 451 aa15.57■□□□□ 0.08
CLPX-203ENST00000558958 TXNL4BQ9NX01 149 aaKnown RBP15.57■□□□□ 0.08
CLPX-203ENST00000558958 CRIM1Q9NZV1 1036 aa15.57■□□□□ 0.08
CLPX-203ENST00000558958 DHDHQ9UQ10 334 aa15.57■□□□□ 0.08
CLPX-203ENST00000558958 SPEF1Q9Y4P9 236 aa15.57■□□□□ 0.08
CLPX-203ENST00000558958 KLF2Q9Y5W3 355 aaPredicted RBP15.57■□□□□ 0.08
CLPX-203ENST00000558958 hCG_38984A0A1B0GV85 526 aa15.56■□□□□ 0.08
CLPX-203ENST00000558958 CASKO14936 926 aa15.56■□□□□ 0.08
CLPX-203ENST00000558958 MTRF1O75570 445 aaKnown RBP15.56■□□□□ 0.08
CLPX-203ENST00000558958 DHRS3O75911 302 aa15.56■□□□□ 0.08
CLPX-203ENST00000558958 ZNF12P17014 697 aa15.56■□□□□ 0.08
CLPX-203ENST00000558958 SOX2P48431 317 aa15.56■□□□□ 0.08
CLPX-203ENST00000558958 ERVS71-1P61550 626 aa15.56■□□□□ 0.08
CLPX-203ENST00000558958 NKX6-1P78426 367 aaPredicted RBP15.56■□□□□ 0.08
CLPX-203ENST00000558958 FAM3AP98173 230 aa15.56■□□□□ 0.08
CLPX-203ENST00000558958 HLXQ14774 488 aaPredicted RBP15.56■□□□□ 0.08
CLPX-203ENST00000558958 BEX5Q5H9J7 111 aa15.56■□□□□ 0.08
CLPX-203ENST00000558958 SPATA46Q5T0L3 261 aa15.56■□□□□ 0.08
CLPX-203ENST00000558958 FOXB2Q5VYV0 432 aa15.56■□□□□ 0.08
CLPX-203ENST00000558958 C22orf42Q6IC83 251 aa15.56■□□□□ 0.08
CLPX-203ENST00000558958 PAMR1Q6UXH9 720 aa15.56■□□□□ 0.08
CLPX-203ENST00000558958 FBXW12Q6X9E4 464 aa15.56■□□□□ 0.08
CLPX-203ENST00000558958 DMRTC2Q8IXT2 367 aaPredicted RBP15.56■□□□□ 0.08
CLPX-203ENST00000558958 OR14K1Q8NGZ2 314 aa15.56■□□□□ 0.08
CLPX-203ENST00000558958 THRSPQ92748 146 aa15.56■□□□□ 0.08
CLPX-203ENST00000558958 ISOC1Q96CN7 298 aa15.56■□□□□ 0.08
CLPX-203ENST00000558958 PLPPR2Q96GM1 343 aa15.56■□□□□ 0.08
CLPX-203ENST00000558958 DERL3Q96Q80 235 aa15.56■□□□□ 0.08
CLPX-203ENST00000558958 BCL7BQ9BQE9 202 aa15.56■□□□□ 0.08
CLPX-203ENST00000558958 OR2J1Q9GZK6 312 aa15.56■□□□□ 0.08
CLPX-203ENST00000558958 PPIL3Q9H2H8 161 aaKnown RBP15.56■□□□□ 0.08
CLPX-203ENST00000558958 ZNF275Q9NSD4 429 aaPredicted RBP15.56■□□□□ 0.08
CLPX-203ENST00000558958 V9GYS6 101 aa15.56■□□□□ 0.08
CLPX-203ENST00000558958 TRBV5-7A0A0A0MS05 114 aa15.55■□□□□ 0.08
CLPX-203ENST00000558958 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP15.55■□□□□ 0.08
CLPX-203ENST00000558958 CCDC160A6NGH7 325 aa15.55■□□□□ 0.08
CLPX-203ENST00000558958 PIN1P1O15428 100 aa15.55■□□□□ 0.08
CLPX-203ENST00000558958 SIAH2O43255 324 aa15.55■□□□□ 0.08
CLPX-203ENST00000558958 LMX1BO60663 402 aa15.55■□□□□ 0.08
CLPX-203ENST00000558958 UCHL1P09936 223 aa15.55■□□□□ 0.08
CLPX-203ENST00000558958 MAPK3P27361 379 aaPredicted RBP15.55■□□□□ 0.08
CLPX-203ENST00000558958 GSK3AP49840 483 aa15.55■□□□□ 0.08
CLPX-203ENST00000558958 LSM3P62310 102 aaKnown RBP15.55■□□□□ 0.08
CLPX-203ENST00000558958 SNTB2Q13425 540 aaKnown RBP15.55■□□□□ 0.08
CLPX-203ENST00000558958 TNK1Q13470 666 aa15.55■□□□□ 0.08
CLPX-203ENST00000558958 OR8B8Q15620 311 aa15.55■□□□□ 0.08
CLPX-203ENST00000558958 FAM27D1Q5T7N8 215 aa15.55■□□□□ 0.08
CLPX-203ENST00000558958 PGAP1Q75T13 922 aa15.55■□□□□ 0.08
CLPX-203ENST00000558958 MRPL21Q7Z2W9 205 aaKnown RBP15.55■□□□□ 0.08
CLPX-203ENST00000558958 SLC25A40Q8TBP6 338 aa15.55■□□□□ 0.08
CLPX-203ENST00000558958 PHYHIPQ92561 330 aa15.55■□□□□ 0.08
CLPX-203ENST00000558958 TMEM106AQ96A25 262 aa15.55■□□□□ 0.08
CLPX-203ENST00000558958 MARS2Q96GW9 593 aaKnown RBP15.55■□□□□ 0.08
CLPX-203ENST00000558958 RADILQ96JH8 1075 aa15.55■□□□□ 0.08
CLPX-203ENST00000558958 RNF167Q9H6Y7 350 aa15.55■□□□□ 0.08
CLPX-203ENST00000558958 A0A1W2PPK0 400 aa15.54■□□□□ 0.08
CLPX-203ENST00000558958 DHRS7CA6NNS2 312 aa15.54■□□□□ 0.08
CLPX-203ENST00000558958 DEFB108AA8MXU0 73 aa15.54■□□□□ 0.08
CLPX-203ENST00000558958 ZNF701M0R085 212 aaPredicted RBP15.54■□□□□ 0.08
CLPX-203ENST00000558958 RAF1P04049 648 aa15.54■□□□□ 0.08
CLPX-203ENST00000558958 ACKR3P25106 362 aa15.54■□□□□ 0.08
CLPX-203ENST00000558958 GLRXP35754 106 aa15.54■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms