RNA–Protein interactions for RNA: ENST00000558790.5

SPG11-212, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 858 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-212ENST00000558790 CDC42EP2O14613 210 aa7.98□□□□□ -1.13
SPG11-212ENST00000558790 IMPA2O14732 288 aa7.98□□□□□ -1.13
SPG11-212ENST00000558790 TNFRSF13BO14836 293 aaPredicted RBP7.98□□□□□ -1.13
SPG11-212ENST00000558790 RER1O15258 196 aa7.98□□□□□ -1.13
SPG11-212ENST00000558790 GPR137BO60478 399 aa7.98□□□□□ -1.13
SPG11-212ENST00000558790 CLPXO76031 633 aa7.98□□□□□ -1.13
SPG11-212ENST00000558790 FSTL3O95633 263 aa7.98□□□□□ -1.13
SPG11-212ENST00000558790 HLA-DPB1P04440 258 aa7.98□□□□□ -1.13
SPG11-212ENST00000558790 MMP9P14780 707 aa7.98□□□□□ -1.13
SPG11-212ENST00000558790 PSMB10P40306 273 aa7.98□□□□□ -1.13
SPG11-212ENST00000558790 GPR4P46093 362 aa7.98□□□□□ -1.13
SPG11-212ENST00000558790 SLC9A3P48764 834 aa7.98□□□□□ -1.13
SPG11-212ENST00000558790 RGS6P49758 472 aa7.98□□□□□ -1.13
SPG11-212ENST00000558790 PROK1P58294 105 aa7.98□□□□□ -1.13
SPG11-212ENST00000558790 RPL15P61313 204 aaKnown RBP7.98□□□□□ -1.13
SPG11-212ENST00000558790 ST3GAL3Q11203 375 aa7.98□□□□□ -1.13
SPG11-212ENST00000558790 TAF9Q16594 264 aa7.98□□□□□ -1.13
SPG11-212ENST00000558790 CYBRD1Q53TN4 286 aa7.98□□□□□ -1.13
SPG11-212ENST00000558790 TTMPQ5BVD1 217 aa7.98□□□□□ -1.13
SPG11-212ENST00000558790 CLEC12AQ5QGZ9 265 aa7.98□□□□□ -1.13
SPG11-212ENST00000558790 FAM122BQ7Z309 247 aa7.98□□□□□ -1.13
SPG11-212ENST00000558790 OFCC1Q8IZS5 231 aa7.98□□□□□ -1.13
SPG11-212ENST00000558790 C1orf87Q8N0U7 546 aa7.98□□□□□ -1.13
SPG11-212ENST00000558790 PCYOX1LQ8NBM8 494 aa7.98□□□□□ -1.13
SPG11-212ENST00000558790 LINC01006Q8NI28 216 aa7.98□□□□□ -1.13
SPG11-212ENST00000558790 DYRK2Q92630 601 aa7.98□□□□□ -1.13
SPG11-212ENST00000558790 RASD2Q96D21 266 aa7.98□□□□□ -1.13
SPG11-212ENST00000558790 TPD52L3Q96J77 140 aa7.98□□□□□ -1.13
SPG11-212ENST00000558790 MAGEB18Q96M61 343 aa7.98□□□□□ -1.13
SPG11-212ENST00000558790 ZNF582Q96NG8 517 aaPredicted RBP7.98□□□□□ -1.13
SPG11-212ENST00000558790 ZNF570Q96NI8 536 aa7.98□□□□□ -1.13
SPG11-212ENST00000558790 MMADHCQ9H3L0 296 aaPredicted RBP7.98□□□□□ -1.13
SPG11-212ENST00000558790 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP7.98□□□□□ -1.13
SPG11-212ENST00000558790 RHCGQ9UBD6 479 aa7.98□□□□□ -1.13
SPG11-212ENST00000558790 ATPIF1Q9UII2 106 aa7.98□□□□□ -1.13
SPG11-212ENST00000558790 TENM2Q9NT68 2774 aa7.97□□□□□ -1.13
SPG11-212ENST00000558790 CENPVL3A0A0U1RRI6 287 aa7.97□□□□□ -1.13
SPG11-212ENST00000558790 A0A1B0GWJ7 208 aa7.97□□□□□ -1.13
SPG11-212ENST00000558790 ZNF879B4DU55 563 aa7.97□□□□□ -1.13
SPG11-212ENST00000558790 J3KTA2 159 aa7.97□□□□□ -1.13
SPG11-212ENST00000558790 P2RY10O00398 339 aa7.97□□□□□ -1.13
SPG11-212ENST00000558790 XKRYO14609 159 aa7.97□□□□□ -1.13
SPG11-212ENST00000558790 FAM20BO75063 409 aa7.97□□□□□ -1.13
SPG11-212ENST00000558790 IGHV4-59P01825 116 aa7.97□□□□□ -1.13
SPG11-212ENST00000558790 CD14P08571 375 aa7.97□□□□□ -1.13
SPG11-212ENST00000558790 FPR3P25089 353 aa7.97□□□□□ -1.13
SPG11-212ENST00000558790 RPL4P36578 427 aaKnown RBP7.97□□□□□ -1.13
SPG11-212ENST00000558790 YAP1P46937 504 aaKnown RBP7.97□□□□□ -1.13
SPG11-212ENST00000558790 RAD23AP54725 363 aa7.97□□□□□ -1.13
SPG11-212ENST00000558790 BPIFB3P59826 476 aa7.97□□□□□ -1.13
SPG11-212ENST00000558790 PRKCDQ05655 676 aa7.97□□□□□ -1.13
SPG11-212ENST00000558790 MAB21L1Q13394 359 aa7.97□□□□□ -1.13
SPG11-212ENST00000558790 KRR1Q13601 381 aaKnown RBP7.97□□□□□ -1.13
SPG11-212ENST00000558790 PRAMEF6Q5VXH4 476 aa7.97□□□□□ -1.13
SPG11-212ENST00000558790 FAM156AQ8NDB6 213 aa7.97□□□□□ -1.13
SPG11-212ENST00000558790 OR8J3Q8NGG0 315 aa7.97□□□□□ -1.13
SPG11-212ENST00000558790 OR5L1Q8NGL2 311 aa7.97□□□□□ -1.13
SPG11-212ENST00000558790 Q8TCH9 128 aa7.97□□□□□ -1.13
SPG11-212ENST00000558790 APOBEC3DQ96AK3 386 aaPredicted RBP7.97□□□□□ -1.13
SPG11-212ENST00000558790 FAM71F1Q96KD3 344 aaPredicted RBP7.97□□□□□ -1.13
SPG11-212ENST00000558790 SYT4Q9H2B2 425 aa7.97□□□□□ -1.13
SPG11-212ENST00000558790 RERGLQ9H628 205 aa7.97□□□□□ -1.13
SPG11-212ENST00000558790 ACOXLQ9NUZ1 547 aa7.97□□□□□ -1.13
SPG11-212ENST00000558790 KIF17Q9P2E2 1029 aa7.97□□□□□ -1.13
SPG11-212ENST00000558790 GRHPRQ9UBQ7 328 aa7.97□□□□□ -1.13
SPG11-212ENST00000558790 POLR1DQ9Y2S0 133 aa7.97□□□□□ -1.13
SPG11-212ENST00000558790 SNX13Q9Y5W8 968 aa7.97□□□□□ -1.13
SPG11-212ENST00000558790 IGHV1-69DA0A0B4J2H0 117 aa7.96□□□□□ -1.14
SPG11-212ENST00000558790 A0A0U1RQK1 487 aa7.96□□□□□ -1.14
SPG11-212ENST00000558790 HTR3EA5X5Y0 456 aa7.96□□□□□ -1.14
SPG11-212ENST00000558790 FAM220BPB1ANY3 271 aa7.96□□□□□ -1.14
SPG11-212ENST00000558790 FFAR1O14842 300 aa7.96□□□□□ -1.14
SPG11-212ENST00000558790 SLC16A7O60669 478 aa7.96□□□□□ -1.14
SPG11-212ENST00000558790 FCN3O75636 299 aa7.96□□□□□ -1.14
SPG11-212ENST00000558790 GASTP01350 101 aa7.96□□□□□ -1.14
SPG11-212ENST00000558790 IFNA14P01570 189 aa7.96□□□□□ -1.14
SPG11-212ENST00000558790 IGHV1-69P01742 117 aa7.96□□□□□ -1.14
SPG11-212ENST00000558790 PRB2P02812 416 aaPredicted RBP7.96□□□□□ -1.14
SPG11-212ENST00000558790 AMY1AP04745 511 aa7.96□□□□□ -1.14
SPG11-212ENST00000558790 IRF2P14316 349 aa7.96□□□□□ -1.14
SPG11-212ENST00000558790 CD200P41217 278 aa7.96□□□□□ -1.14
SPG11-212ENST00000558790 NPY4RP50391 375 aa7.96□□□□□ -1.14
SPG11-212ENST00000558790 LSM6P62312 80 aaKnown RBP7.96□□□□□ -1.14
SPG11-212ENST00000558790 CYLC2Q14093 348 aaPredicted RBP7.96□□□□□ -1.14
SPG11-212ENST00000558790 TRAM2Q15035 370 aa7.96□□□□□ -1.14
SPG11-212ENST00000558790 MPPED2Q15777 294 aa7.96□□□□□ -1.14
SPG11-212ENST00000558790 MEP1BQ16820 701 aa7.96□□□□□ -1.14
SPG11-212ENST00000558790 ANKDD1AQ495B1 522 aa7.96□□□□□ -1.14
SPG11-212ENST00000558790 ERICH5Q6P6B1 374 aa7.96□□□□□ -1.14
SPG11-212ENST00000558790 VTCN1Q7Z7D3 282 aa7.96□□□□□ -1.14
SPG11-212ENST00000558790 ZSCAN2Q7Z7L9 614 aaPredicted RBP7.96□□□□□ -1.14
SPG11-212ENST00000558790 LDLRAD3Q86YD5 345 aa7.96□□□□□ -1.14
SPG11-212ENST00000558790 FAM110DQ8TAY7 271 aaPredicted RBP7.96□□□□□ -1.14
SPG11-212ENST00000558790 TBC1D15Q8TC07 691 aa7.96□□□□□ -1.14
SPG11-212ENST00000558790 LHX4Q969G2 390 aa7.96□□□□□ -1.14
SPG11-212ENST00000558790 ZNF583Q96ND8 569 aa7.96□□□□□ -1.14
SPG11-212ENST00000558790 WDFY2Q96P53 400 aa7.96□□□□□ -1.14
SPG11-212ENST00000558790 COQ7Q99807 217 aa7.96□□□□□ -1.14
SPG11-212ENST00000558790 ECSITQ9BQ95 431 aa7.96□□□□□ -1.14
SPG11-212ENST00000558790 HDHD2Q9H0R4 259 aa7.96□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms