RNA–Protein interactions for RNA: ENST00000558534.5

RABGGTA-205, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 3

Gene RABGGTA, Length 753 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-205ENST00000558534 NAA40Q86UY6 237 aa13.4□□□□□ -0.26
RABGGTA-205ENST00000558534 PLPP7Q8NBV4 271 aa13.4□□□□□ -0.26
RABGGTA-205ENST00000558534 BHLHE23Q8NDY6 225 aa13.4□□□□□ -0.26
RABGGTA-205ENST00000558534 OR51G2Q8NGK0 314 aa13.4□□□□□ -0.26
RABGGTA-205ENST00000558534 OR11L1Q8NGX0 322 aa13.4□□□□□ -0.26
RABGGTA-205ENST00000558534 YIPF5Q969M3 257 aa13.4□□□□□ -0.26
RABGGTA-205ENST00000558534 OR8B4Q96RC9 309 aa13.4□□□□□ -0.26
RABGGTA-205ENST00000558534 GSX1Q9H4S2 264 aaPredicted RBP13.4□□□□□ -0.26
RABGGTA-205ENST00000558534 ADGRL4Q9HBW9 690 aa13.4□□□□□ -0.26
RABGGTA-205ENST00000558534 C14orf119Q9NWQ9 140 aa13.4□□□□□ -0.26
RABGGTA-205ENST00000558534 SMPD3Q9NY59 655 aaPredicted RBP13.4□□□□□ -0.26
RABGGTA-205ENST00000558534 DNAJC27Q9NZQ0 273 aa13.4□□□□□ -0.26
RABGGTA-205ENST00000558534 ZANQ9Y493 2812 aa13.39□□□□□ -0.27
RABGGTA-205ENST00000558534 IGHV4-61A0A0C4DH41 118 aa13.39□□□□□ -0.27
RABGGTA-205ENST00000558534 TMEM269A0A1B0GVZ9 245 aa13.39□□□□□ -0.27
RABGGTA-205ENST00000558534 A8MV72 311 aaPredicted RBP13.39□□□□□ -0.27
RABGGTA-205ENST00000558534 LYNX1G3V0Z9 82 aa13.39□□□□□ -0.27
RABGGTA-205ENST00000558534 MTRF1O75570 445 aaKnown RBP13.39□□□□□ -0.27
RABGGTA-205ENST00000558534 LYNX1P0DP58 116 aa13.39□□□□□ -0.27
RABGGTA-205ENST00000558534 CXCR4P61073 352 aa13.39□□□□□ -0.27
RABGGTA-205ENST00000558534 RCN1Q15293 331 aa13.39□□□□□ -0.27
RABGGTA-205ENST00000558534 TRIP10Q15642 601 aa13.39□□□□□ -0.27
RABGGTA-205ENST00000558534 OCLNQ16625 522 aa13.39□□□□□ -0.27
RABGGTA-205ENST00000558534 ZNF181Q2M3W8 571 aa13.39□□□□□ -0.27
RABGGTA-205ENST00000558534 ZIK1Q3SY52 487 aaPredicted RBP13.39□□□□□ -0.27
RABGGTA-205ENST00000558534 FAM166AQ6J272 317 aa13.39□□□□□ -0.27
RABGGTA-205ENST00000558534 Q6ZR03 302 aa13.39□□□□□ -0.27
RABGGTA-205ENST00000558534 FAM220AQ7Z4H9 259 aa13.39□□□□□ -0.27
RABGGTA-205ENST00000558534 MUC20Q8N307 709 aaPredicted RBP13.39□□□□□ -0.27
RABGGTA-205ENST00000558534 SPICQ8N5J4 248 aa13.39□□□□□ -0.27
RABGGTA-205ENST00000558534 MAPK1IP1LQ8NDC0 245 aa13.39□□□□□ -0.27
RABGGTA-205ENST00000558534 SMR3AQ99954 134 aa13.39□□□□□ -0.27
RABGGTA-205ENST00000558534 ADAT1Q9BUB4 502 aaKnown RBP13.39□□□□□ -0.27
RABGGTA-205ENST00000558534 DCLRE1BQ9H816 532 aa13.39□□□□□ -0.27
RABGGTA-205ENST00000558534 TMEM106BQ9NUM4 274 aa13.39□□□□□ -0.27
RABGGTA-205ENST00000558534 TMEM160Q9NX00 188 aa13.39□□□□□ -0.27
RABGGTA-205ENST00000558534 LPAR3Q9UBY5 353 aa13.39□□□□□ -0.27
RABGGTA-205ENST00000558534 KCNS2Q9ULS6 477 aa13.39□□□□□ -0.27
RABGGTA-205ENST00000558534 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP13.39□□□□□ -0.272e-6■■□□□ 14.1
RABGGTA-205ENST00000558534 CSPG4Q6UVK1 2322 aa13.39□□□□□ -0.27
RABGGTA-205ENST00000558534 A0A0U1RQV5 110 aa13.38□□□□□ -0.27
RABGGTA-205ENST00000558534 LOC100130705A0A1B0GUX0 176 aa13.38□□□□□ -0.27
RABGGTA-205ENST00000558534 LILRA1O75019 489 aa13.38□□□□□ -0.27
RABGGTA-205ENST00000558534 SLC2A1P11166 492 aa13.38□□□□□ -0.27
RABGGTA-205ENST00000558534 HNF1AP20823 631 aa13.38□□□□□ -0.27
RABGGTA-205ENST00000558534 POLR2IP36954 125 aaKnown RBP13.38□□□□□ -0.27
RABGGTA-205ENST00000558534 CD200P41217 278 aa13.38□□□□□ -0.27
RABGGTA-205ENST00000558534 GATA4P43694 442 aa13.38□□□□□ -0.27
RABGGTA-205ENST00000558534 MTNR1AP48039 350 aa13.38□□□□□ -0.27
RABGGTA-205ENST00000558534 MMP16P51512 607 aa13.38□□□□□ -0.27
RABGGTA-205ENST00000558534 TMEM255AQ5JRV8 349 aa13.38□□□□□ -0.27
RABGGTA-205ENST00000558534 C6orf52Q5T4I8 152 aa13.38□□□□□ -0.27
RABGGTA-205ENST00000558534 TTC23Q5W5X9 447 aa13.38□□□□□ -0.27
RABGGTA-205ENST00000558534 PLEKHG7Q6ZR37 379 aa13.38□□□□□ -0.27
RABGGTA-205ENST00000558534 EGFL6Q8IUX8 553 aa13.38□□□□□ -0.27
RABGGTA-205ENST00000558534 TEX29Q8N6K0 151 aa13.38□□□□□ -0.27
RABGGTA-205ENST00000558534 LINC01356Q8N9X3 169 aa13.38□□□□□ -0.27
RABGGTA-205ENST00000558534 OR2AE1Q8NHA4 323 aa13.38□□□□□ -0.27
RABGGTA-205ENST00000558534 ITLN1Q8WWA0 313 aa13.38□□□□□ -0.27
RABGGTA-205ENST00000558534 GTF3AQ92664 365 aaKnown RBP13.38□□□□□ -0.27
RABGGTA-205ENST00000558534 MEGF10Q96KG7 1140 aa13.38□□□□□ -0.27
RABGGTA-205ENST00000558534 AMELYQ99218 206 aa13.38□□□□□ -0.27
RABGGTA-205ENST00000558534 TRIM36Q9NQ86 728 aa13.38□□□□□ -0.27
RABGGTA-205ENST00000558534 NPTNQ9Y639 398 aa13.38□□□□□ -0.27
RABGGTA-205ENST00000558534 ANXA2P2A6NMY6 339 aa13.37□□□□□ -0.27
RABGGTA-205ENST00000558534 B4DSR2 109 aa13.37□□□□□ -0.27
RABGGTA-205ENST00000558534 M0R129 80 aa13.37□□□□□ -0.27
RABGGTA-205ENST00000558534 SLC16A6O15403 523 aa13.37□□□□□ -0.27
RABGGTA-205ENST00000558534 SULT1C4O75897 302 aa13.37□□□□□ -0.27
RABGGTA-205ENST00000558534 FSTL3O95633 263 aa13.37□□□□□ -0.27
RABGGTA-205ENST00000558534 IGHV4-31P0DP07 118 aa13.37□□□□□ -0.27
RABGGTA-205ENST00000558534 MAP2K3P46734 347 aa13.37□□□□□ -0.27
RABGGTA-205ENST00000558534 IL5RAQ01344 420 aa13.37□□□□□ -0.27
RABGGTA-205ENST00000558534 KCNJ8Q15842 424 aa13.37□□□□□ -0.27
RABGGTA-205ENST00000558534 GFOD2Q3B7J2 385 aa13.37□□□□□ -0.27
RABGGTA-205ENST00000558534 PRSS45Q7RTY3 260 aa13.37□□□□□ -0.27
RABGGTA-205ENST00000558534 KCTD20Q7Z5Y7 419 aa13.37□□□□□ -0.27
RABGGTA-205ENST00000558534 KLHL36Q8N4N3 616 aa13.37□□□□□ -0.27
RABGGTA-205ENST00000558534 SETD9Q8NE22 299 aa13.37□□□□□ -0.27
RABGGTA-205ENST00000558534 CCDC54Q8NEL0 328 aa13.37□□□□□ -0.27
RABGGTA-205ENST00000558534 OR10AD1Q8NGE0 317 aa13.37□□□□□ -0.27
RABGGTA-205ENST00000558534 OR56B2PQ8NGI1 322 aa13.37□□□□□ -0.27
RABGGTA-205ENST00000558534 OR8S1Q8NH09 359 aa13.37□□□□□ -0.27
RABGGTA-205ENST00000558534 SGK3Q96BR1 496 aa13.37□□□□□ -0.27
RABGGTA-205ENST00000558534 FN3KRPQ9HA64 309 aa13.37□□□□□ -0.27
RABGGTA-205ENST00000558534 BRD7Q9NPI1 651 aa13.37□□□□□ -0.27
RABGGTA-205ENST00000558534 YAE1D1Q9NRH1 226 aa13.37□□□□□ -0.27
RABGGTA-205ENST00000558534 NUFIP1Q9UHK0 495 aaKnown RBP13.37□□□□□ -0.27
RABGGTA-205ENST00000558534 WIPI2Q9Y4P8 454 aa13.37□□□□□ -0.27
RABGGTA-205ENST00000558534 MPC1Q9Y5U8 109 aa13.37□□□□□ -0.27
RABGGTA-205ENST00000558534 SNX5Q9Y5X3 404 aa13.37□□□□□ -0.27
RABGGTA-205ENST00000558534 C2CD3Q4AC94 2353 aa13.37□□□□□ -0.27
RABGGTA-205ENST00000558534 LOC100289279A0A1B0GTE1 492 aa13.36□□□□□ -0.27
RABGGTA-205ENST00000558534 hCG_38984A0A1B0GV85 526 aa13.36□□□□□ -0.27
RABGGTA-205ENST00000558534 ISPDA4D126 451 aa13.36□□□□□ -0.27
RABGGTA-205ENST00000558534 LOC110117498-PIK3R3F6TDL0 507 aa13.36□□□□□ -0.27
RABGGTA-205ENST00000558534 RPSAP08865 295 aaKnown RBP13.36□□□□□ -0.27
RABGGTA-205ENST00000558534 CA6P23280 308 aa13.36□□□□□ -0.27
RABGGTA-205ENST00000558534 GSK3AP49840 483 aa13.36□□□□□ -0.27
RABGGTA-205ENST00000558534 ACTA2P62736 377 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms