RNA–Protein interactions for RNA: ENST00000558400.1

TPM1-213, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 658 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-213ENST00000558400 SPSB4Q96A44 273 aa7.18□□□□□ -1.26
TPM1-213ENST00000558400 OR2V2Q96R30 315 aa7.18□□□□□ -1.26
TPM1-213ENST00000558400 BEX2Q9BXY8 128 aa7.18□□□□□ -1.26
TPM1-213ENST00000558400 GABARAPL3Q9BY60 117 aa7.18□□□□□ -1.26
TPM1-213ENST00000558400 S100A14Q9HCY8 104 aa7.18□□□□□ -1.26
TPM1-213ENST00000558400 TMEM106BQ9NUM4 274 aa7.18□□□□□ -1.26
TPM1-213ENST00000558400 WARS2Q9UGM6 360 aaKnown RBP7.18□□□□□ -1.26
TPM1-213ENST00000558400 WIPI2Q9Y4P8 454 aa7.18□□□□□ -1.26
TPM1-213ENST00000558400 N6AMT1Q9Y5N5 214 aa7.18□□□□□ -1.26
TPM1-213ENST00000558400 NPTNQ9Y639 398 aa7.18□□□□□ -1.26
TPM1-213ENST00000558400 VPS13CQ709C8 3753 aa7.17□□□□□ -1.26
TPM1-213ENST00000558400 ANKRD30BLA7E2S9 258 aa7.17□□□□□ -1.26
TPM1-213ENST00000558400 H3BNX3 289 aa7.17□□□□□ -1.26
TPM1-213ENST00000558400 TBX1O43435 398 aa7.17□□□□□ -1.26
TPM1-213ENST00000558400 SBK2P0C263 348 aa7.17□□□□□ -1.26
TPM1-213ENST00000558400 IRF2P14316 349 aa7.17□□□□□ -1.26
TPM1-213ENST00000558400 HNF1AP20823 631 aa7.17□□□□□ -1.26
TPM1-213ENST00000558400 EPHA2P29317 976 aa7.17□□□□□ -1.26
TPM1-213ENST00000558400 ATP6V1E1P36543 226 aa7.17□□□□□ -1.26
TPM1-213ENST00000558400 NAA10P41227 235 aaPredicted RBP7.17□□□□□ -1.26
TPM1-213ENST00000558400 GATA4P43694 442 aa7.17□□□□□ -1.26
TPM1-213ENST00000558400 DVL1P1P54792 670 aaPredicted RBP7.17□□□□□ -1.26
TPM1-213ENST00000558400 ZNF121P58317 390 aaPredicted RBP7.17□□□□□ -1.26
TPM1-213ENST00000558400 LMO4P61968 165 aa7.17□□□□□ -1.26
TPM1-213ENST00000558400 ROM1Q03395 351 aa7.17□□□□□ -1.26
TPM1-213ENST00000558400 MVKQ03426 396 aa7.17□□□□□ -1.26
TPM1-213ENST00000558400 OR8G1Q15617 311 aa7.17□□□□□ -1.26
TPM1-213ENST00000558400 TRIP10Q15642 601 aa7.17□□□□□ -1.26
TPM1-213ENST00000558400 SNAI3Q3KNW1 292 aa7.17□□□□□ -1.26
TPM1-213ENST00000558400 SLC25A30Q5SVS4 291 aa7.17□□□□□ -1.26
TPM1-213ENST00000558400 GLYATL3Q5SZD4 288 aa7.17□□□□□ -1.26
TPM1-213ENST00000558400 MEDAGQ5VYS4 303 aa7.17□□□□□ -1.26
TPM1-213ENST00000558400 FAM57BQ71RH2 274 aa7.17□□□□□ -1.26
TPM1-213ENST00000558400 SPATC1Q76KD6 591 aa7.17□□□□□ -1.26
TPM1-213ENST00000558400 PRSS45Q7RTY3 260 aa7.17□□□□□ -1.26
TPM1-213ENST00000558400 LRRC28Q86X40 367 aaPredicted RBP7.17□□□□□ -1.26
TPM1-213ENST00000558400 ZNF679Q8IYX0 411 aa7.17□□□□□ -1.26
TPM1-213ENST00000558400 PQLC1Q8N2U9 271 aa7.17□□□□□ -1.26
TPM1-213ENST00000558400 MUC20Q8N307 709 aaPredicted RBP7.17□□□□□ -1.26
TPM1-213ENST00000558400 KLHL36Q8N4N3 616 aa7.17□□□□□ -1.26
TPM1-213ENST00000558400 SPICQ8N5J4 248 aa7.17□□□□□ -1.26
TPM1-213ENST00000558400 TEX29Q8N6K0 151 aa7.17□□□□□ -1.26
TPM1-213ENST00000558400 BHLHE23Q8NDY6 225 aa7.17□□□□□ -1.26
TPM1-213ENST00000558400 BBS1Q8NFJ9 593 aa7.17□□□□□ -1.26
TPM1-213ENST00000558400 OR11L1Q8NGX0 322 aa7.17□□□□□ -1.26
TPM1-213ENST00000558400 CLDND2Q8NHS1 167 aa7.17□□□□□ -1.26
TPM1-213ENST00000558400 ITLN1Q8WWA0 313 aa7.17□□□□□ -1.26
TPM1-213ENST00000558400 SGK3Q96BR1 496 aa7.17□□□□□ -1.26
TPM1-213ENST00000558400 REEP6Q96HR9 211 aa7.17□□□□□ -1.26
TPM1-213ENST00000558400 PGAM5Q96HS1 289 aa7.17□□□□□ -1.26
TPM1-213ENST00000558400 MEGF10Q96KG7 1140 aa7.17□□□□□ -1.26
TPM1-213ENST00000558400 HRASLS5Q96KN8 279 aa7.17□□□□□ -1.26
TPM1-213ENST00000558400 IL4I1Q96RQ9 567 aa7.17□□□□□ -1.26
TPM1-213ENST00000558400 MYCBPQ99417 103 aaPredicted RBP7.17□□□□□ -1.26
TPM1-213ENST00000558400 CNN2Q99439 309 aaKnown RBP7.17□□□□□ -1.26
TPM1-213ENST00000558400 SHARPINQ9H0F6 387 aa7.17□□□□□ -1.26
TPM1-213ENST00000558400 RIBC2Q9H4K1 309 aa7.17□□□□□ -1.26
TPM1-213ENST00000558400 GCM1Q9NP62 436 aa7.17□□□□□ -1.26
TPM1-213ENST00000558400 ABCB9Q9NP78 766 aa7.17□□□□□ -1.26
TPM1-213ENST00000558400 C14orf119Q9NWQ9 140 aa7.17□□□□□ -1.26
TPM1-213ENST00000558400 IMPAD1Q9NX62 359 aa7.17□□□□□ -1.26
TPM1-213ENST00000558400 TREM2Q9NZC2 230 aa7.17□□□□□ -1.26
TPM1-213ENST00000558400 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP7.17□□□□□ -1.26
TPM1-213ENST00000558400 PCDHB10Q9UN67 800 aa7.17□□□□□ -1.26
TPM1-213ENST00000558400 TRAV20A0A0B4J274 112 aa7.16□□□□□ -1.26
TPM1-213ENST00000558400 A0A0U1RQV5 110 aa7.16□□□□□ -1.26
TPM1-213ENST00000558400 TMEM269A0A1B0GVZ9 245 aa7.16□□□□□ -1.26
TPM1-213ENST00000558400 CCDC182A6NF36 153 aa7.16□□□□□ -1.26
TPM1-213ENST00000558400 ZNF670-ZNF695F2Z2N8 137 aa7.16□□□□□ -1.26
TPM1-213ENST00000558400 TMEM178BH3BS89 294 aa7.16□□□□□ -1.26
TPM1-213ENST00000558400 MPZL2O60487 215 aa7.16□□□□□ -1.26
TPM1-213ENST00000558400 BAG2O95816 211 aa7.16□□□□□ -1.26
TPM1-213ENST00000558400 OR2T7P0C7T2 308 aa7.16□□□□□ -1.26
TPM1-213ENST00000558400 SLC2A1P11166 492 aa7.16□□□□□ -1.26
TPM1-213ENST00000558400 PSKH1P11801 424 aa7.16□□□□□ -1.26
TPM1-213ENST00000558400 ATP6V1B1P15313 513 aa7.16□□□□□ -1.26
TPM1-213ENST00000558400 CA6P23280 308 aa7.16□□□□□ -1.26
TPM1-213ENST00000558400 HTR1FP30939 366 aa7.16□□□□□ -1.26
TPM1-213ENST00000558400 POLR2IP36954 125 aaKnown RBP7.16□□□□□ -1.26
TPM1-213ENST00000558400 MDH2P40926 338 aaKnown RBP7.16□□□□□ -1.26
TPM1-213ENST00000558400 CD200P41217 278 aa7.16□□□□□ -1.26
TPM1-213ENST00000558400 MMP16P51512 607 aa7.16□□□□□ -1.26
TPM1-213ENST00000558400 RIDAP52758 137 aaKnown RBP7.16□□□□□ -1.26
TPM1-213ENST00000558400 FAM3AP98173 230 aa7.16□□□□□ -1.26
TPM1-213ENST00000558400 EGR3Q06889 387 aa7.16□□□□□ -1.26
TPM1-213ENST00000558400 ZNF829Q3KNS6 432 aaPredicted RBP7.16□□□□□ -1.26
TPM1-213ENST00000558400 TMEM155Q4W5P6 130 aa7.16□□□□□ -1.26
TPM1-213ENST00000558400 ZNF322Q6U7Q0 402 aaPredicted RBP7.16□□□□□ -1.26
TPM1-213ENST00000558400 LIAT1Q6ZQX7 453 aa7.16□□□□□ -1.26
TPM1-213ENST00000558400 GLCCI1Q86VQ1 547 aa7.16□□□□□ -1.26
TPM1-213ENST00000558400 EGFL6Q8IUX8 553 aa7.16□□□□□ -1.26
TPM1-213ENST00000558400 CBR4Q8N4T8 237 aa7.16□□□□□ -1.26
TPM1-213ENST00000558400 OR2T27Q8NH04 317 aa7.16□□□□□ -1.26
TPM1-213ENST00000558400 OR51F2Q8NH61 342 aa7.16□□□□□ -1.26
TPM1-213ENST00000558400 OR2AE1Q8NHA4 323 aa7.16□□□□□ -1.26
TPM1-213ENST00000558400 EME1Q96AY2 570 aa7.16□□□□□ -1.26
TPM1-213ENST00000558400 Q96MT0 163 aa7.16□□□□□ -1.26
TPM1-213ENST00000558400 AMELYQ99218 206 aa7.16□□□□□ -1.26
TPM1-213ENST00000558400 GAL3ST1Q99999 423 aa7.16□□□□□ -1.26
TPM1-213ENST00000558400 ZNF665Q9H7R5 613 aa7.16□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms