RNA–Protein interactions for RNA: ENST00000558190.5

ATXN3-248, Transcript of ataxin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATXN3, Length 26,812 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-248ENST00000558190 PSMB2P49721 201 aa3.34□□□□□ -1.87
ATXN3-248ENST00000558190 GAMTQ14353 236 aa3.34□□□□□ -1.87
ATXN3-248ENST00000558190 FA2HQ7L5A8 372 aa3.34□□□□□ -1.87
ATXN3-248ENST00000558190 SYS1Q8N2H4 156 aa3.34□□□□□ -1.87
ATXN3-248ENST00000558190 OR10AD1Q8NGE0 317 aa3.34□□□□□ -1.87
ATXN3-248ENST00000558190 CHST11Q9NPF2 352 aa3.34□□□□□ -1.87
ATXN3-248ENST00000558190 LMTK3Q96Q04 1460 aa3.34□□□□□ -1.87
ATXN3-248ENST00000558190 MRPL2Q5T653 305 aaKnown RBP3.34□□□□□ -1.87
ATXN3-248ENST00000558190 SRD5A3Q9H8P0 318 aa3.34□□□□□ -1.87
ATXN3-248ENST00000558190 DHCR7Q9UBM7 475 aaKnown RBP3.34□□□□□ -1.87
ATXN3-248ENST00000558190 KCNK7Q9Y2U2 307 aa3.34□□□□□ -1.87
ATXN3-248ENST00000558190 KIF1BO60333 1816 aa3.34□□□□□ -1.87
ATXN3-248ENST00000558190 TOX3O15405 576 aaPredicted RBP3.34□□□□□ -1.87
ATXN3-248ENST00000558190 PYCR3Q53H96 274 aa3.34□□□□□ -1.87
ATXN3-248ENST00000558190 Q56UQ5 140 aa3.34□□□□□ -1.87
ATXN3-248ENST00000558190 SLC43A2Q8N370 569 aa3.34□□□□□ -1.87
ATXN3-248ENST00000558190 ARIH2OSQ8N7S6 290 aa3.34□□□□□ -1.87
ATXN3-248ENST00000558190 OR10P1Q8NGE3 313 aa3.34□□□□□ -1.87
ATXN3-248ENST00000558190 OR10W1Q8NGF6 305 aa3.34□□□□□ -1.87
ATXN3-248ENST00000558190 PAM16Q9Y3D7 125 aa3.34□□□□□ -1.87
ATXN3-248ENST00000558190 PLPP2O43688 288 aa3.34□□□□□ -1.87
ATXN3-248ENST00000558190 ICOSLGO75144 302 aa3.34□□□□□ -1.87
ATXN3-248ENST00000558190 PPIAP62937 165 aaKnown RBP3.34□□□□□ -1.87
ATXN3-248ENST00000558190 GFI1BQ5VTD9 330 aa3.34□□□□□ -1.87
ATXN3-248ENST00000558190 SLC39A5Q6ZMH5 540 aa3.34□□□□□ -1.87
ATXN3-248ENST00000558190 OPN3Q9H1Y3 402 aaPredicted RBP3.34□□□□□ -1.87
ATXN3-248ENST00000558190 NPDC1Q9NQX5 325 aaPredicted RBP3.34□□□□□ -1.87
ATXN3-248ENST00000558190 FUT9Q9Y231 359 aa3.34□□□□□ -1.87
ATXN3-248ENST00000558190 PRSS23O95084 383 aa3.34□□□□□ -1.87
ATXN3-248ENST00000558190 GABRA6Q16445 453 aa3.34□□□□□ -1.87
ATXN3-248ENST00000558190 LBX2Q6XYB7 198 aa3.34□□□□□ -1.87
ATXN3-248ENST00000558190 PPM1DO15297 605 aa3.34□□□□□ -1.88
ATXN3-248ENST00000558190 KLK3P07288 261 aaPredicted RBP3.34□□□□□ -1.88
ATXN3-248ENST00000558190 CAMPP49913 170 aa3.34□□□□□ -1.88
ATXN3-248ENST00000558190 ACTR1AP61163 376 aa3.34□□□□□ -1.88
ATXN3-248ENST00000558190 VGLL4Q14135 290 aa3.34□□□□□ -1.88
ATXN3-248ENST00000558190 SNAI3Q3KNW1 292 aa3.34□□□□□ -1.88
ATXN3-248ENST00000558190 OR5AU1Q8NGC0 362 aa3.34□□□□□ -1.88
ATXN3-248ENST00000558190 SLC39A7Q92504 469 aa3.34□□□□□ -1.88
ATXN3-248ENST00000558190 CPEB1Q9BZB8 566 aaKnown RBP3.34□□□□□ -1.88
ATXN3-248ENST00000558190 RGRP47804 291 aa3.34□□□□□ -1.88
ATXN3-248ENST00000558190 RPS21P63220 83 aaKnown RBP3.34□□□□□ -1.88
ATXN3-248ENST00000558190 DHRS2Q13268 280 aa3.34□□□□□ -1.88
ATXN3-248ENST00000558190 H3BVH4 76 aa3.34□□□□□ -1.88
ATXN3-248ENST00000558190 ZIC2O95409 532 aaPredicted RBP3.34□□□□□ -1.88
ATXN3-248ENST00000558190 RPS15AP62244 130 aaKnown RBP3.34□□□□□ -1.88
ATXN3-248ENST00000558190 SLC35E4Q6ICL7 350 aa3.34□□□□□ -1.88
ATXN3-248ENST00000558190 DIO2Q92813 273 aa3.34□□□□□ -1.88
ATXN3-248ENST00000558190 NRASP01111 189 aa3.34□□□□□ -1.88
ATXN3-248ENST00000558190 HRASP01112 189 aa3.34□□□□□ -1.88
ATXN3-248ENST00000558190 KRASP01116 189 aa3.34□□□□□ -1.88
ATXN3-248ENST00000558190 IAPPP10997 89 aa3.34□□□□□ -1.88
ATXN3-248ENST00000558190 IGFBP6P24592 240 aaPredicted RBP3.34□□□□□ -1.88
ATXN3-248ENST00000558190 RBM11P57052 281 aaKnown RBP3.34□□□□□ -1.88
ATXN3-248ENST00000558190 CCL20P78556 96 aa3.34□□□□□ -1.88
ATXN3-248ENST00000558190 HMGCLL1Q8TB92 370 aa3.34□□□□□ -1.88
ATXN3-248ENST00000558190 PAAF1Q9BRP4 392 aa3.34□□□□□ -1.88
ATXN3-248ENST00000558190 PMCHP20382 165 aa3.34□□□□□ -1.88
ATXN3-248ENST00000558190 OR10J5Q8NHC4 309 aa3.34□□□□□ -1.88
ATXN3-248ENST00000558190 PBX4Q9BYU1 374 aa3.34□□□□□ -1.88
ATXN3-248ENST00000558190 A0A0A6YYC8 382 aaPredicted RBP3.34□□□□□ -1.88
ATXN3-248ENST00000558190 I3L1I5 382 aaPredicted RBP3.34□□□□□ -1.88
ATXN3-248ENST00000558190 CYR61O00622 381 aa3.34□□□□□ -1.88
ATXN3-248ENST00000558190 GEMIN2O14893 280 aaKnown RBP3.34□□□□□ -1.88
ATXN3-248ENST00000558190 ZFPL1O95159 310 aa3.34□□□□□ -1.88
ATXN3-248ENST00000558190 SSBP1Q04837 148 aaKnown RBP3.34□□□□□ -1.88
ATXN3-248ENST00000558190 PRAMEF8Q5VWM4 474 aa3.34□□□□□ -1.88
ATXN3-248ENST00000558190 PRAMEF7Q5VXH5 474 aa3.34□□□□□ -1.88
ATXN3-248ENST00000558190 FDX2Q6P4F2 183 aa3.34□□□□□ -1.88
ATXN3-248ENST00000558190 SGMS2Q8NHU3 365 aa3.34□□□□□ -1.88
ATXN3-248ENST00000558190 RAB37Q96AX2 223 aa3.34□□□□□ -1.88
ATXN3-248ENST00000558190 WDFY2Q96P53 400 aa3.34□□□□□ -1.88
ATXN3-248ENST00000558190 NUDT16L1Q9BRJ7 211 aaKnown RBP3.34□□□□□ -1.88
ATXN3-248ENST00000558190 TBX21Q9UL17 535 aa3.34□□□□□ -1.88
ATXN3-248ENST00000558190 RRP8O43159 456 aaKnown RBP3.34□□□□□ -1.88
ATXN3-248ENST00000558190 C20orf196Q8IYI0 205 aa3.34□□□□□ -1.88
ATXN3-248ENST00000558190 PFN4Q8NHR9 129 aa3.34□□□□□ -1.88
ATXN3-248ENST00000558190 LMF2Q9BU23 707 aaKnown RBP3.34□□□□□ -1.88
ATXN3-248ENST00000558190 TPSD1Q9BZJ3 242 aa3.34□□□□□ -1.88
ATXN3-248ENST00000558190 PPOXP50336 477 aa3.33□□□□□ -1.88
ATXN3-248ENST00000558190 DOC2BQ14184 412 aa3.33□□□□□ -1.88
ATXN3-248ENST00000558190 SLC36A1Q7Z2H8 476 aa3.33□□□□□ -1.88
ATXN3-248ENST00000558190 SMIM4Q8WVI0 70 aa3.33□□□□□ -1.88
ATXN3-248ENST00000558190 OR2J1Q9GZK6 312 aa3.33□□□□□ -1.88
ATXN3-248ENST00000558190 WNT6Q9Y6F9 365 aa3.33□□□□□ -1.88
ATXN3-248ENST00000558190 USP3Q9Y6I4 520 aa3.33□□□□□ -1.88
ATXN3-248ENST00000558190 PRSS2P07478 247 aa3.33□□□□□ -1.88
ATXN3-248ENST00000558190 COX5AP20674 150 aa3.33□□□□□ -1.88
ATXN3-248ENST00000558190 PIK3IP1Q96FE7 263 aa3.33□□□□□ -1.88
ATXN3-248ENST00000558190 FNDC4Q9H6D8 234 aaPredicted RBP3.33□□□□□ -1.88
ATXN3-248ENST00000558190 PLAC1Q9HBJ0 212 aa3.33□□□□□ -1.88
ATXN3-248ENST00000558190 BCL2L10Q9HD36 194 aa3.33□□□□□ -1.88
ATXN3-248ENST00000558190 PARP11Q9NR21 331 aa3.33□□□□□ -1.88
ATXN3-248ENST00000558190 ASPDHA6ND91 283 aa3.33□□□□□ -1.88
ATXN3-248ENST00000558190 CDKN2AP42771 156 aaKnown RBP3.33□□□□□ -1.88
ATXN3-248ENST00000558190 LBX1P52954 281 aa3.33□□□□□ -1.88
ATXN3-248ENST00000558190 SRSF3P84103 164 aaKnown RBP3.33□□□□□ -1.88
ATXN3-248ENST00000558190 RIPPLY2Q5TAB7 128 aa3.33□□□□□ -1.88
ATXN3-248ENST00000558190 C1QL3Q5VWW1 255 aa3.33□□□□□ -1.88
ATXN3-248ENST00000558190 ABHD17CQ6PCB6 329 aa3.33□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms