RNA–Protein interactions for RNA: ENST00000558013.5

LDLR-207, Transcript of low density lipoprotein receptor, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LDLR, Length 3,144 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLR-207ENST00000558013 IGKV1-9A0A0C4DH69 117 aa11.39□□□□□ -0.59
LDLR-207ENST00000558013 A0A1W2PQM1 296 aa11.39□□□□□ -0.59
LDLR-207ENST00000558013 KANTRA0A1W2PQU2 76 aa11.39□□□□□ -0.59
LDLR-207ENST00000558013 C5orf51A6NDU8 294 aa11.39□□□□□ -0.59
LDLR-207ENST00000558013 KRBOX1C9JBD0 128 aa11.39□□□□□ -0.59
LDLR-207ENST00000558013 SDCBPO00560 298 aaPredicted RBP11.39□□□□□ -0.59
LDLR-207ENST00000558013 IFNA6P05013 189 aa11.39□□□□□ -0.59
LDLR-207ENST00000558013 ZNF20P17024 532 aa11.39□□□□□ -0.59
LDLR-207ENST00000558013 RAB6AP20340 208 aa11.39□□□□□ -0.59
LDLR-207ENST00000558013 CASRP41180 1078 aa11.39□□□□□ -0.59
LDLR-207ENST00000558013 SLC9A3R2Q15599 337 aa11.39□□□□□ -0.59
LDLR-207ENST00000558013 OR2W3Q7Z3T1 314 aa11.39□□□□□ -0.59
LDLR-207ENST00000558013 UEVLDQ8IX04 471 aa11.39□□□□□ -0.59
LDLR-207ENST00000558013 ZNF775Q96BV0 537 aaPredicted RBP11.39□□□□□ -0.59
LDLR-207ENST00000558013 TAS2R3Q9NYW6 316 aa11.39□□□□□ -0.59
LDLR-207ENST00000558013 MYOTQ9UBF9 498 aa11.39□□□□□ -0.59
LDLR-207ENST00000558013 MRPS28Q9Y2Q9 187 aaKnown RBP11.39□□□□□ -0.59
LDLR-207ENST00000558013 TMEM14DPA8MWL7 114 aa11.39□□□□□ -0.59
LDLR-207ENST00000558013 HTR3BO95264 441 aa11.39□□□□□ -0.59
LDLR-207ENST00000558013 QDPRP09417 244 aa11.39□□□□□ -0.59
LDLR-207ENST00000558013 SERPINF1P36955 418 aa11.39□□□□□ -0.59
LDLR-207ENST00000558013 DEFA5Q01523 94 aa11.39□□□□□ -0.59
LDLR-207ENST00000558013 MEF2DQ14814 521 aa11.39□□□□□ -0.59
LDLR-207ENST00000558013 OR52H1Q8NGJ2 320 aa11.39□□□□□ -0.59
LDLR-207ENST00000558013 PTX4Q96A99 478 aa11.39□□□□□ -0.59
LDLR-207ENST00000558013 ARHGAP5-AS1Q96IT6 56 aa11.39□□□□□ -0.59
LDLR-207ENST00000558013 F5H0A9 414 aaPredicted RBP11.38□□□□□ -0.59
LDLR-207ENST00000558013 SULT2B1O00204 365 aa11.38□□□□□ -0.59
LDLR-207ENST00000558013 ZNF208O43345 1280 aa11.38□□□□□ -0.59
LDLR-207ENST00000558013 PLATP00750 562 aa11.38□□□□□ -0.59
LDLR-207ENST00000558013 HCKP08631 526 aa11.38□□□□□ -0.59
LDLR-207ENST00000558013 PGAM2P15259 253 aa11.38□□□□□ -0.59
LDLR-207ENST00000558013 AFF3P51826 1226 aaKnown RBP11.38□□□□□ -0.59
LDLR-207ENST00000558013 ZNF273Q14593 569 aa11.38□□□□□ -0.59
LDLR-207ENST00000558013 RAB12Q6IQ22 244 aa11.38□□□□□ -0.59
LDLR-207ENST00000558013 C5orf46Q6UWT4 87 aa11.38□□□□□ -0.59
LDLR-207ENST00000558013 TFAP2EQ6VUC0 442 aa11.38□□□□□ -0.59
LDLR-207ENST00000558013 HSD17B13Q7Z5P4 300 aaPredicted RBP11.38□□□□□ -0.59
LDLR-207ENST00000558013 MISPQ8IVT2 679 aa11.38□□□□□ -0.59
LDLR-207ENST00000558013 ARMC10Q8N2F6 343 aa11.38□□□□□ -0.59
LDLR-207ENST00000558013 BPIFCQ8NFQ6 507 aa11.38□□□□□ -0.59
LDLR-207ENST00000558013 OR2AJ1Q8NGZ0 328 aa11.38□□□□□ -0.59
LDLR-207ENST00000558013 FBXW5Q969U6 566 aa11.38□□□□□ -0.59
LDLR-207ENST00000558013 FOXRED1Q96CU9 486 aaPredicted RBP11.38□□□□□ -0.59
LDLR-207ENST00000558013 RRNAD1Q96FB5 475 aaKnown RBP11.38□□□□□ -0.59
LDLR-207ENST00000558013 SEMA5BQ9P283 1151 aa11.38□□□□□ -0.59
LDLR-207ENST00000558013 EXPH5Q8NEV8 1989 aa11.38□□□□□ -0.59
LDLR-207ENST00000558013 A0A0A6YYH2 397 aa11.38□□□□□ -0.59
LDLR-207ENST00000558013 A6NJ64 397 aa11.38□□□□□ -0.59
LDLR-207ENST00000558013 FAM74A7A6NL05 159 aa11.38□□□□□ -0.59
LDLR-207ENST00000558013 BPNT1O95861 308 aa11.38□□□□□ -0.59
LDLR-207ENST00000558013 GABREP78334 506 aa11.38□□□□□ -0.59
LDLR-207ENST00000558013 FAM74A3Q4VXF1 159 aa11.38□□□□□ -0.59
LDLR-207ENST00000558013 ZNF529Q6P280 563 aa11.38□□□□□ -0.59
LDLR-207ENST00000558013 WDR74Q6RFH5 385 aaPredicted RBP11.38□□□□□ -0.59
LDLR-207ENST00000558013 WDSUB1Q8N9V3 476 aa11.38□□□□□ -0.59
LDLR-207ENST00000558013 TMEM185AQ8NFB2 350 aa11.38□□□□□ -0.59
LDLR-207ENST00000558013 LHFPL5Q8TAF8 219 aa11.38□□□□□ -0.59
LDLR-207ENST00000558013 PHB2Q99623 299 aa11.38□□□□□ -0.59
LDLR-207ENST00000558013 ST6GALNAC5Q9BVH7 336 aa11.38□□□□□ -0.59
LDLR-207ENST00000558013 TGIF2Q9GZN2 237 aa11.38□□□□□ -0.59
LDLR-207ENST00000558013 MYOZ1Q9NP98 299 aaPredicted RBP11.38□□□□□ -0.59
LDLR-207ENST00000558013 PNRC2Q9NPJ4 139 aaKnown RBP11.38□□□□□ -0.59
LDLR-207ENST00000558013 SLC2A8Q9NY64 477 aa11.38□□□□□ -0.59
LDLR-207ENST00000558013 A0A0D9SG52 128 aa11.38□□□□□ -0.59
LDLR-207ENST00000558013 ATP6V1G2-DDX39BF2Z307 99 aa11.38□□□□□ -0.59
LDLR-207ENST00000558013 BCL2L11O43521 198 aa11.38□□□□□ -0.59
LDLR-207ENST00000558013 CRTAPO75718 401 aaPredicted RBP11.38□□□□□ -0.59
LDLR-207ENST00000558013 IL2RAP01589 272 aa11.38□□□□□ -0.59
LDLR-207ENST00000558013 SGCAQ16586 387 aa11.38□□□□□ -0.59
LDLR-207ENST00000558013 THEM4Q5T1C6 240 aa11.38□□□□□ -0.59
LDLR-207ENST00000558013 TMEM200AQ86VY9 491 aa11.38□□□□□ -0.59
LDLR-207ENST00000558013 NOXO1Q8NFA2 376 aa11.38□□□□□ -0.59
LDLR-207ENST00000558013 SLC39A7Q92504 469 aa11.38□□□□□ -0.59
LDLR-207ENST00000558013 RAB3CQ96E17 227 aa11.38□□□□□ -0.59
LDLR-207ENST00000558013 GPER1Q99527 375 aa11.38□□□□□ -0.59
LDLR-207ENST00000558013 CRB3Q9BUF7 120 aa11.38□□□□□ -0.59
LDLR-207ENST00000558013 PHF7Q9BWX1 381 aaPredicted RBP11.38□□□□□ -0.59
LDLR-207ENST00000558013 C5orf66Q9H5L9 145 aa11.38□□□□□ -0.59
LDLR-207ENST00000558013 WIF1Q9Y5W5 379 aa11.38□□□□□ -0.59
LDLR-207ENST00000558013 ZNF878C9JN71 531 aa11.37□□□□□ -0.59
LDLR-207ENST00000558013 H0YIZ8 118 aa11.37□□□□□ -0.59
LDLR-207ENST00000558013 IGHG1P01857 330 aa11.37□□□□□ -0.59
LDLR-207ENST00000558013 AGTR1P30556 359 aa11.37□□□□□ -0.59
LDLR-207ENST00000558013 CX3CR1P49238 355 aa11.37□□□□□ -0.59
LDLR-207ENST00000558013 COL19A1Q14993 1142 aa11.37□□□□□ -0.59
LDLR-207ENST00000558013 PHYHD1Q5SRE7 291 aa11.37□□□□□ -0.59
LDLR-207ENST00000558013 PHF19Q5T6S3 580 aa11.37□□□□□ -0.59
LDLR-207ENST00000558013 ACOT7LQ6ZUV0 252 aa11.37□□□□□ -0.59
LDLR-207ENST00000558013 MOB3CQ70IA8 216 aa11.37□□□□□ -0.59
LDLR-207ENST00000558013 LRRC18Q8N456 261 aa11.37□□□□□ -0.59
LDLR-207ENST00000558013 OR1S2Q8NGQ3 325 aa11.37□□□□□ -0.59
LDLR-207ENST00000558013 NUBPLQ8TB37 319 aa11.37□□□□□ -0.59
LDLR-207ENST00000558013 TMEM230Q96A57 120 aa11.37□□□□□ -0.59
LDLR-207ENST00000558013 SPSB2Q99619 263 aa11.37□□□□□ -0.59
LDLR-207ENST00000558013 ADAT1Q9BUB4 502 aaKnown RBP11.37□□□□□ -0.59
LDLR-207ENST00000558013 SDHAF3Q9NRP4 125 aa11.37□□□□□ -0.59
LDLR-207ENST00000558013 LHX6Q9UPM6 363 aa11.37□□□□□ -0.59
LDLR-207ENST00000558013 CSAG2Q9Y5P2 127 aa11.37□□□□□ -0.59
LDLR-207ENST00000558013 IGLV3-12A0A075B6K2 115 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms