RNA–Protein interactions for RNA: ENST00000557713.5

SCFD1-224, Transcript of sec1 family domain containing 1, humanhuman

TSL 4

Gene SCFD1, Length 556 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-224ENST00000557713 DYRK2Q92630 601 aa13.19□□□□□ -0.3
SCFD1-224ENST00000557713 TRIM15Q9C019 465 aa13.19□□□□□ -0.3
SCFD1-224ENST00000557713 SPAG4Q9NPE6 437 aa13.19□□□□□ -0.3
SCFD1-224ENST00000557713 C1orf123Q9NWV4 160 aa13.19□□□□□ -0.3
SCFD1-224ENST00000557713 GGT3PA6NGU5 568 aa13.18□□□□□ -0.3
SCFD1-224ENST00000557713 GMNNO75496 209 aa13.18□□□□□ -0.3
SCFD1-224ENST00000557713 GYPAP02724 150 aa13.18□□□□□ -0.3
SCFD1-224ENST00000557713 PSKH1P11801 424 aa13.18□□□□□ -0.3
SCFD1-224ENST00000557713 ZNF823P16415 610 aa13.18□□□□□ -0.3
SCFD1-224ENST00000557713 PYCR1P32322 319 aa13.18□□□□□ -0.3
SCFD1-224ENST00000557713 RPS27P42677 84 aaKnown RBP13.18□□□□□ -0.3
SCFD1-224ENST00000557713 SPIBQ01892 262 aa13.18□□□□□ -0.3
SCFD1-224ENST00000557713 TSPAN31Q12999 210 aa13.18□□□□□ -0.3
SCFD1-224ENST00000557713 C11orf91Q3C1V1 193 aa13.18□□□□□ -0.3
SCFD1-224ENST00000557713 GLYATL3Q5SZD4 288 aa13.18□□□□□ -0.3
SCFD1-224ENST00000557713 METTL11BQ5VVY1 283 aa13.18□□□□□ -0.3
SCFD1-224ENST00000557713 DRAM2Q6UX65 266 aa13.18□□□□□ -0.3
SCFD1-224ENST00000557713 ZNF826PQ6ZT77 177 aa13.18□□□□□ -0.3
SCFD1-224ENST00000557713 BTN2A1Q7KYR7 527 aa13.18□□□□□ -0.3
SCFD1-224ENST00000557713 RNF148Q8N7C7 305 aa13.18□□□□□ -0.3
SCFD1-224ENST00000557713 LHX4Q969G2 390 aa13.18□□□□□ -0.3
SCFD1-224ENST00000557713 TVP23AA6NH52 213 aa13.17□□□□□ -0.3
SCFD1-224ENST00000557713 DVL1O14640 695 aa13.17□□□□□ -0.3
SCFD1-224ENST00000557713 ECDO95905 644 aaPredicted RBP13.17□□□□□ -0.3
SCFD1-224ENST00000557713 GRPP07492 148 aa13.17□□□□□ -0.3
SCFD1-224ENST00000557713 IFNGR2P38484 337 aa13.17□□□□□ -0.3
SCFD1-224ENST00000557713 IER3P46695 156 aa13.17□□□□□ -0.3
SCFD1-224ENST00000557713 ARF6P62330 175 aa13.17□□□□□ -0.3
SCFD1-224ENST00000557713 TEX36Q5VZQ5 186 aa13.17□□□□□ -0.3
SCFD1-224ENST00000557713 ASPHD2Q6ICH7 369 aa13.17□□□□□ -0.3
SCFD1-224ENST00000557713 BRICD5Q6PL45 260 aa13.17□□□□□ -0.3
SCFD1-224ENST00000557713 LDLRAD3Q86YD5 345 aa13.17□□□□□ -0.3
SCFD1-224ENST00000557713 FAM90A1Q86YD7 464 aa13.17□□□□□ -0.3
SCFD1-224ENST00000557713 C11orf53Q8IXP5 236 aa13.17□□□□□ -0.3
SCFD1-224ENST00000557713 LINC01006Q8NI28 216 aa13.17□□□□□ -0.3
SCFD1-224ENST00000557713 GNPDA2Q8TDQ7 276 aa13.17□□□□□ -0.3
SCFD1-224ENST00000557713 CMTM5Q96DZ9 223 aa13.17□□□□□ -0.3
SCFD1-224ENST00000557713 CCT8L2Q96SF2 557 aa13.17□□□□□ -0.3
SCFD1-224ENST00000557713 NSRP1Q9H0G5 558 aaKnown RBP13.17□□□□□ -0.3
SCFD1-224ENST00000557713 MYLK2Q9H1R3 596 aa13.17□□□□□ -0.3
SCFD1-224ENST00000557713 ADA2Q9NZK5 511 aa13.17□□□□□ -0.3
SCFD1-224ENST00000557713 KAAG1Q9UBP8 84 aa13.17□□□□□ -0.3
SCFD1-224ENST00000557713 RNF114Q9Y508 228 aa13.17□□□□□ -0.3
SCFD1-224ENST00000557713 V9GYQ6 96 aa13.17□□□□□ -0.3
SCFD1-224ENST00000557713 A0A0U1RQK1 487 aa13.16□□□□□ -0.3
SCFD1-224ENST00000557713 M0QZ24 198 aa13.16□□□□□ -0.3
SCFD1-224ENST00000557713 BHLHE40O14503 412 aa13.16□□□□□ -0.3
SCFD1-224ENST00000557713 TIMM23O14925 209 aa13.16□□□□□ -0.3
SCFD1-224ENST00000557713 GPR137BO60478 399 aa13.16□□□□□ -0.3
SCFD1-224ENST00000557713 CLPXO76031 633 aa13.16□□□□□ -0.3
SCFD1-224ENST00000557713 IGHV4-59P01825 116 aa13.16□□□□□ -0.3
SCFD1-224ENST00000557713 POU4F2Q12837 409 aa13.16□□□□□ -0.3
SCFD1-224ENST00000557713 PGBD2Q6P3X8 592 aa13.16□□□□□ -0.3
SCFD1-224ENST00000557713 LYPD4Q6UWN0 246 aa13.16□□□□□ -0.3
SCFD1-224ENST00000557713 DCXRQ7Z4W1 244 aa13.16□□□□□ -0.3
SCFD1-224ENST00000557713 CYB561A3Q8NBI2 242 aa13.16□□□□□ -0.3
SCFD1-224ENST00000557713 KCNJ15Q99712 375 aa13.16□□□□□ -0.3
SCFD1-224ENST00000557713 MMP27Q9H306 513 aa13.16□□□□□ -0.3
SCFD1-224ENST00000557713 EGLN3Q9H6Z9 239 aa13.16□□□□□ -0.3
SCFD1-224ENST00000557713 CNTD2Q9H8S5 307 aa13.16□□□□□ -0.3
SCFD1-224ENST00000557713 C14orf119Q9NWQ9 140 aa13.16□□□□□ -0.3
SCFD1-224ENST00000557713 PRKDCP78527 4128 aaKnown RBP13.15□□□□□ -0.3
SCFD1-224ENST00000557713 FABP3P05413 133 aa13.15□□□□□ -0.3
SCFD1-224ENST00000557713 PRDX6P30041 224 aa13.15□□□□□ -0.3
SCFD1-224ENST00000557713 RRM2P31350 389 aa13.15□□□□□ -0.3
SCFD1-224ENST00000557713 PRKXP51817 358 aa13.15□□□□□ -0.3
SCFD1-224ENST00000557713 PROK1P58294 105 aa13.15□□□□□ -0.3
SCFD1-224ENST00000557713 MZT1Q08AG7 82 aa13.15□□□□□ -0.3
SCFD1-224ENST00000557713 PCK2Q16822 640 aa13.15□□□□□ -0.3
SCFD1-224ENST00000557713 PIP4P2Q8N4L2 257 aa13.15□□□□□ -0.3
SCFD1-224ENST00000557713 LY6G5BQ8NDX9 201 aa13.15□□□□□ -0.3
SCFD1-224ENST00000557713 PROKR2Q8NFJ6 384 aa13.15□□□□□ -0.3
SCFD1-224ENST00000557713 OR56B2PQ8NGI1 322 aa13.15□□□□□ -0.3
SCFD1-224ENST00000557713 OR51L1Q8NGJ5 315 aa13.15□□□□□ -0.3
SCFD1-224ENST00000557713 OR2T4Q8NH00 348 aa13.15□□□□□ -0.3
SCFD1-224ENST00000557713 SPSB4Q96A44 273 aa13.15□□□□□ -0.3
SCFD1-224ENST00000557713 SLAMF6Q96DU3 332 aa13.15□□□□□ -0.3
SCFD1-224ENST00000557713 RBM4BQ9BQ04 359 aaKnown RBP13.15□□□□□ -0.3
SCFD1-224ENST00000557713 IL1RAPQ9NPH3 570 aa13.15□□□□□ -0.3
SCFD1-224ENST00000557713 ZNF446Q9NWS9 450 aa13.15□□□□□ -0.3
SCFD1-224ENST00000557713 RPUSD1Q9UJJ7 312 aaKnown RBP13.15□□□□□ -0.3
SCFD1-224ENST00000557713 KPTNQ9Y664 436 aa13.15□□□□□ -0.3
SCFD1-224ENST00000557713 IGHV3OR15-7A0A075B7D8 119 aa13.14□□□□□ -0.31
SCFD1-224ENST00000557713 A0A0G2JK05 382 aa13.14□□□□□ -0.31
SCFD1-224ENST00000557713 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP13.14□□□□□ -0.31
SCFD1-224ENST00000557713 A6NLC8 198 aa13.14□□□□□ -0.31
SCFD1-224ENST00000557713 SLC2A1P11166 492 aa13.14□□□□□ -0.31
SCFD1-224ENST00000557713 HSD17B1P14061 328 aa13.14□□□□□ -0.31
SCFD1-224ENST00000557713 DDOSTP39656 456 aa13.14□□□□□ -0.31
SCFD1-224ENST00000557713 HMGA2P52926 109 aa13.14□□□□□ -0.31
SCFD1-224ENST00000557713 CDONQ4KMG0 1287 aa13.14□□□□□ -0.31
SCFD1-224ENST00000557713 VMO1Q7Z5L0 202 aa13.14□□□□□ -0.31
SCFD1-224ENST00000557713 WDR86Q86TI4 376 aa13.14□□□□□ -0.31
SCFD1-224ENST00000557713 ZDHHC21Q8IVQ6 265 aa13.14□□□□□ -0.31
SCFD1-224ENST00000557713 FGFRL1Q8N441 504 aa13.14□□□□□ -0.31
SCFD1-224ENST00000557713 ZSCAN4Q8NAM6 433 aaPredicted RBP13.14□□□□□ -0.31
SCFD1-224ENST00000557713 SCCPDHQ8NBX0 429 aa13.14□□□□□ -0.31
SCFD1-224ENST00000557713 SLC37A3Q8NCC5 494 aa13.14□□□□□ -0.31
SCFD1-224ENST00000557713 OR4C15Q8NGM1 316 aa13.14□□□□□ -0.31
SCFD1-224ENST00000557713 MCUR1Q96AQ8 359 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms