RNA–Protein interactions for RNA: ENST00000557658.5

VIPAS39-211, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VIPAS39, Length 2,562 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-211ENST00000557658 IGHV4-34P06331 123 aa10.5□□□□□ -0.73
VIPAS39-211ENST00000557658 OR1D4P47884 311 aa10.5□□□□□ -0.73
VIPAS39-211ENST00000557658 BLKP51451 505 aa10.5□□□□□ -0.73
VIPAS39-211ENST00000557658 GPR85P60893 370 aa10.5□□□□□ -0.73
VIPAS39-211ENST00000557658 RAB5BP61020 215 aa10.5□□□□□ -0.73
VIPAS39-211ENST00000557658 MRPS21P82921 87 aaKnown RBP10.5□□□□□ -0.73
VIPAS39-211ENST00000557658 ZNF529Q6P280 563 aa10.5□□□□□ -0.73
VIPAS39-211ENST00000557658 GLIPR1L1Q6UWM5 242 aa10.5□□□□□ -0.73
VIPAS39-211ENST00000557658 TTLL10Q6ZVT0 673 aa10.5□□□□□ -0.73
VIPAS39-211ENST00000557658 TMEM200AQ86VY9 491 aa10.5□□□□□ -0.73
VIPAS39-211ENST00000557658 ZFP82Q8N141 532 aa10.5□□□□□ -0.73
VIPAS39-211ENST00000557658 OR5H2Q8NGV7 314 aa10.5□□□□□ -0.73
VIPAS39-211ENST00000557658 NECAB3Q96P71 396 aaPredicted RBP10.5□□□□□ -0.73
VIPAS39-211ENST00000557658 FOXQ1Q9C009 403 aa10.5□□□□□ -0.73
VIPAS39-211ENST00000557658 SLC5A7Q9GZV3 580 aa10.5□□□□□ -0.73
VIPAS39-211ENST00000557658 WWTR1Q9GZV5 400 aa10.5□□□□□ -0.73
VIPAS39-211ENST00000557658 MRPS28Q9Y2Q9 187 aaKnown RBP10.5□□□□□ -0.73
VIPAS39-211ENST00000557658 IGKV1D-43A0A0B4J1Z2 117 aa10.49□□□□□ -0.73
VIPAS39-211ENST00000557658 MED6O75586 246 aa10.49□□□□□ -0.73
VIPAS39-211ENST00000557658 SFTA3P0C7M3 94 aa10.49□□□□□ -0.73
VIPAS39-211ENST00000557658 HIST1H1DP16402 221 aaKnown RBP10.49□□□□□ -0.73
VIPAS39-211ENST00000557658 RAB32Q13637 225 aa10.49□□□□□ -0.73
VIPAS39-211ENST00000557658 CHCHD2P9Q5T1J5 151 aaPredicted RBP10.49□□□□□ -0.73
VIPAS39-211ENST00000557658 SLC29A4Q7RTT9 530 aa10.49□□□□□ -0.73
VIPAS39-211ENST00000557658 BHLHE23Q8NDY6 225 aa10.49□□□□□ -0.73
VIPAS39-211ENST00000557658 OR6S1Q8NH40 331 aa10.49□□□□□ -0.73
VIPAS39-211ENST00000557658 KCNG3Q8TAE7 436 aa10.49□□□□□ -0.73
VIPAS39-211ENST00000557658 NUBPLQ8TB37 319 aa10.49□□□□□ -0.73
VIPAS39-211ENST00000557658 TMEM234Q8WY98 164 aa10.49□□□□□ -0.73
VIPAS39-211ENST00000557658 SLC26A1Q9H2B4 701 aa10.49□□□□□ -0.73
VIPAS39-211ENST00000557658 MTIF3Q9H2K0 278 aaKnown RBP10.49□□□□□ -0.73
VIPAS39-211ENST00000557658 C8orf33Q9H7E9 229 aaPredicted RBP10.49□□□□□ -0.73
VIPAS39-211ENST00000557658 SEC61A2Q9H9S3 476 aa10.49□□□□□ -0.73
VIPAS39-211ENST00000557658 CUTCQ9NTM9 273 aa10.49□□□□□ -0.73
VIPAS39-211ENST00000557658 COPS7AQ9UBW8 275 aa10.49□□□□□ -0.73
VIPAS39-211ENST00000557658 MEMO1Q9Y316 297 aa10.49□□□□□ -0.73
VIPAS39-211ENST00000557658 COL5A1P20908 1838 aaPredicted RBP10.49□□□□□ -0.73
VIPAS39-211ENST00000557658 PHF3Q92576 2039 aaKnown RBP10.49□□□□□ -0.73
VIPAS39-211ENST00000557658 A0A0A6YYD4 124 aa10.49□□□□□ -0.73
VIPAS39-211ENST00000557658 SOCS1O15524 211 aa10.49□□□□□ -0.73
VIPAS39-211ENST00000557658 FOLR2P14207 255 aa10.49□□□□□ -0.73
VIPAS39-211ENST00000557658 HTRA3P83110 453 aa10.49□□□□□ -0.73
VIPAS39-211ENST00000557658 POU3F1Q03052 451 aaPredicted RBP10.49□□□□□ -0.73
VIPAS39-211ENST00000557658 FAM189A2Q15884 450 aa10.49□□□□□ -0.73
VIPAS39-211ENST00000557658 ANKRD55Q3KP44 614 aa10.49□□□□□ -0.73
VIPAS39-211ENST00000557658 FAM76BQ5HYJ3 339 aa10.49□□□□□ -0.73
VIPAS39-211ENST00000557658 PLAC9Q5JTB6 97 aa10.49□□□□□ -0.73
VIPAS39-211ENST00000557658 H1FNTQ75WM6 255 aaPredicted RBP10.49□□□□□ -0.73
VIPAS39-211ENST00000557658 Q7L0L9 218 aa10.49□□□□□ -0.73
VIPAS39-211ENST00000557658 PEG10Q86TG7 708 aaKnown RBP10.49□□□□□ -0.73
VIPAS39-211ENST00000557658 C11orf40Q8WZ69 217 aa10.49□□□□□ -0.73
VIPAS39-211ENST00000557658 DAZLQ92904 295 aaKnown RBP10.49□□□□□ -0.73
VIPAS39-211ENST00000557658 OR10C1Q96KK4 312 aa10.49□□□□□ -0.73
VIPAS39-211ENST00000557658 TGM7Q96PF1 710 aa10.49□□□□□ -0.73
VIPAS39-211ENST00000557658 TAF9BQ9HBM6 251 aa10.49□□□□□ -0.73
VIPAS39-211ENST00000557658 SMCO4Q9NRQ5 59 aa10.49□□□□□ -0.73
VIPAS39-211ENST00000557658 PRR13Q9NZ81 148 aa10.49□□□□□ -0.73
VIPAS39-211ENST00000557658 SRPK3Q9UPE1 567 aa10.49□□□□□ -0.73
VIPAS39-211ENST00000557658 LHX6Q9UPM6 363 aa10.49□□□□□ -0.73
VIPAS39-211ENST00000557658 SEC16AO15027 2179 aa10.48□□□□□ -0.73
VIPAS39-211ENST00000557658 IGHV5-51A0A0C4DH38 117 aa10.48□□□□□ -0.73
VIPAS39-211ENST00000557658 NPIPB13A6NJU9 1138 aa10.48□□□□□ -0.73
VIPAS39-211ENST00000557658 COLCA2A8K830 154 aa10.48□□□□□ -0.73
VIPAS39-211ENST00000557658 NPIPB4C9JG80 1138 aa10.48□□□□□ -0.73
VIPAS39-211ENST00000557658 CDC14BO60729 498 aa10.48□□□□□ -0.73
VIPAS39-211ENST00000557658 LRP3O75074 770 aa10.48□□□□□ -0.73
VIPAS39-211ENST00000557658 GABRG2P18507 467 aa10.48□□□□□ -0.73
VIPAS39-211ENST00000557658 PI3P19957 117 aa10.48□□□□□ -0.73
VIPAS39-211ENST00000557658 LPAR6P43657 344 aa10.48□□□□□ -0.73
VIPAS39-211ENST00000557658 SUPT4H1P63272 117 aaKnown RBP10.48□□□□□ -0.73
VIPAS39-211ENST00000557658 FOXK1P85037 733 aa10.48□□□□□ -0.73
VIPAS39-211ENST00000557658 POC1AQ8NBT0 407 aa10.48□□□□□ -0.73
VIPAS39-211ENST00000557658 OR51F2Q8NH61 342 aa10.48□□□□□ -0.73
VIPAS39-211ENST00000557658 ZDHHC19Q8WVZ1 309 aaPredicted RBP10.48□□□□□ -0.73
VIPAS39-211ENST00000557658 OCSTAMPQ9BR26 566 aa10.48□□□□□ -0.73
VIPAS39-211ENST00000557658 LRRC61Q9BV99 259 aa10.48□□□□□ -0.73
VIPAS39-211ENST00000557658 TMEM59Q9BXS4 323 aa10.48□□□□□ -0.73
VIPAS39-211ENST00000557658 RNF122Q9H9V4 155 aa10.48□□□□□ -0.73
VIPAS39-211ENST00000557658 FANCFQ9NPI8 374 aa10.48□□□□□ -0.73
VIPAS39-211ENST00000557658 MFNGO00587 321 aa10.48□□□□□ -0.73
VIPAS39-211ENST00000557658 CD5P06127 495 aa10.48□□□□□ -0.73
VIPAS39-211ENST00000557658 AMY2BP19961 511 aa10.48□□□□□ -0.73
VIPAS39-211ENST00000557658 ADH6P28332 368 aa10.48□□□□□ -0.73
VIPAS39-211ENST00000557658 PTGFRP43088 359 aa10.48□□□□□ -0.73
VIPAS39-211ENST00000557658 OR3A2P47893 321 aa10.48□□□□□ -0.73
VIPAS39-211ENST00000557658 GFERP55789 205 aa10.48□□□□□ -0.73
VIPAS39-211ENST00000557658 S100A10P60903 97 aa10.48□□□□□ -0.73
VIPAS39-211ENST00000557658 HSF1Q00613 529 aa10.48□□□□□ -0.73
VIPAS39-211ENST00000557658 TSC22D1Q15714 1073 aa10.48□□□□□ -0.73
VIPAS39-211ENST00000557658 RPL7L1Q6DKI1 246 aaKnown RBP10.48□□□□□ -0.73
VIPAS39-211ENST00000557658 MISPQ8IVT2 679 aa10.48□□□□□ -0.73
VIPAS39-211ENST00000557658 C15orf54Q8N8G6 183 aa10.48□□□□□ -0.73
VIPAS39-211ENST00000557658 TMEM104Q8NE00 496 aa10.48□□□□□ -0.73
VIPAS39-211ENST00000557658 OR56B1Q8NGI3 324 aa10.48□□□□□ -0.73
VIPAS39-211ENST00000557658 MFSD8Q8NHS3 518 aa10.48□□□□□ -0.73
VIPAS39-211ENST00000557658 OR51E1Q8TCB6 317 aa10.48□□□□□ -0.73
VIPAS39-211ENST00000557658 SPACA5Q96QH8 159 aa10.48□□□□□ -0.73
VIPAS39-211ENST00000557658 CDCA3Q99618 268 aaPredicted RBP10.48□□□□□ -0.73
VIPAS39-211ENST00000557658 RTBDNQ9BSG5 229 aaPredicted RBP10.48□□□□□ -0.73
VIPAS39-211ENST00000557658 CRB3Q9BUF7 120 aa10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms