RNA–Protein interactions for RNA: ENST00000557427.5

SHMT2-230, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 569 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-230ENST00000557427 SLC22A25Q6T423 547 aa10.78□□□□□ -0.68
SHMT2-230ENST00000557427 PLEKHG7Q6ZR37 379 aa10.78□□□□□ -0.68
SHMT2-230ENST00000557427 LINGO2Q7L985 606 aa10.78□□□□□ -0.68
SHMT2-230ENST00000557427 KCTD20Q7Z5Y7 419 aa10.78□□□□□ -0.68
SHMT2-230ENST00000557427 TPRA1Q86W33 373 aa10.78□□□□□ -0.68
SHMT2-230ENST00000557427 LYSMD2Q8IV50 215 aa10.78□□□□□ -0.68
SHMT2-230ENST00000557427 TIGD4Q8IY51 512 aa10.78□□□□□ -0.68
SHMT2-230ENST00000557427 ABHD4Q8TB40 342 aa10.78□□□□□ -0.68
SHMT2-230ENST00000557427 FAM216AQ8WUB2 273 aa10.78□□□□□ -0.68
SHMT2-230ENST00000557427 SNX33Q8WV41 574 aa10.78□□□□□ -0.68
SHMT2-230ENST00000557427 SMIM19Q96E16 107 aa10.78□□□□□ -0.68
SHMT2-230ENST00000557427 DHRS9Q9BPW9 319 aa10.78□□□□□ -0.68
SHMT2-230ENST00000557427 SLC17A5Q9NRA2 495 aa10.78□□□□□ -0.68
SHMT2-230ENST00000557427 VSX1Q9NZR4 365 aaPredicted RBP10.78□□□□□ -0.68
SHMT2-230ENST00000557427 METRNQ9UJH8 293 aa10.78□□□□□ -0.68
SHMT2-230ENST00000557427 POU2F3Q9UKI9 436 aa10.78□□□□□ -0.68
SHMT2-230ENST00000557427 COPS3Q9UNS2 423 aa10.78□□□□□ -0.68
SHMT2-230ENST00000557427 hCG_2014768A0A024R1R8 64 aa10.77□□□□□ -0.69
SHMT2-230ENST00000557427 PRSS37A4D1T9 235 aa10.77□□□□□ -0.69
SHMT2-230ENST00000557427 LRP5LA4QPB2 252 aa10.77□□□□□ -0.69
SHMT2-230ENST00000557427 A6NIZ1 184 aa10.77□□□□□ -0.69
SHMT2-230ENST00000557427 C11orf98E9PRG8 122 aa10.77□□□□□ -0.69
SHMT2-230ENST00000557427 PHYHO14832 338 aa10.77□□□□□ -0.69
SHMT2-230ENST00000557427 RGS5O15539 181 aa10.77□□□□□ -0.69
SHMT2-230ENST00000557427 TBX1O43435 398 aa10.77□□□□□ -0.69
SHMT2-230ENST00000557427 SLC43A1O75387 559 aa10.77□□□□□ -0.69
SHMT2-230ENST00000557427 GATBO75879 557 aaKnown RBP10.77□□□□□ -0.69
SHMT2-230ENST00000557427 HLA-DOBP13765 273 aa10.77□□□□□ -0.69
SHMT2-230ENST00000557427 AHCYP23526 432 aa10.77□□□□□ -0.69
SHMT2-230ENST00000557427 PTAFRP25105 342 aa10.77□□□□□ -0.69
SHMT2-230ENST00000557427 CD40P25942 277 aa10.77□□□□□ -0.69
SHMT2-230ENST00000557427 IL2RGP31785 369 aa10.77□□□□□ -0.69
SHMT2-230ENST00000557427 GDI2P50395 445 aaKnown RBP10.77□□□□□ -0.69
SHMT2-230ENST00000557427 RAP1BP61224 184 aa10.77□□□□□ -0.69
SHMT2-230ENST00000557427 RAP1AP62834 184 aa10.77□□□□□ -0.69
SHMT2-230ENST00000557427 SLC3A1Q07837 685 aa10.77□□□□□ -0.69
SHMT2-230ENST00000557427 AWAT1Q58HT5 328 aa10.77□□□□□ -0.69
SHMT2-230ENST00000557427 DDI2Q5TDH0 399 aa10.77□□□□□ -0.69
SHMT2-230ENST00000557427 FAM205BPQ63HN1 556 aa10.77□□□□□ -0.69
SHMT2-230ENST00000557427 MZT2AQ6P582 158 aa10.77□□□□□ -0.69
SHMT2-230ENST00000557427 TMEM108Q6UXF1 575 aa10.77□□□□□ -0.69
SHMT2-230ENST00000557427 SSX8Q7RTT4 187 aa10.77□□□□□ -0.69
SHMT2-230ENST00000557427 ABHD12BQ7Z5M8 362 aaPredicted RBP10.77□□□□□ -0.69
SHMT2-230ENST00000557427 PXKQ7Z7A4 578 aa10.77□□□□□ -0.69
SHMT2-230ENST00000557427 LAX1Q8IWV1 398 aa10.77□□□□□ -0.69
SHMT2-230ENST00000557427 UEVLDQ8IX04 471 aa10.77□□□□□ -0.69
SHMT2-230ENST00000557427 OR6V1Q8N148 313 aa10.77□□□□□ -0.69
SHMT2-230ENST00000557427 ACOT12Q8WYK0 555 aa10.77□□□□□ -0.69
SHMT2-230ENST00000557427 PHYHIPQ92561 330 aa10.77□□□□□ -0.69
SHMT2-230ENST00000557427 TXNDC15Q96J42 360 aa10.77□□□□□ -0.69
SHMT2-230ENST00000557427 RADILQ96JH8 1075 aa10.77□□□□□ -0.69
SHMT2-230ENST00000557427 ALKBH3Q96Q83 286 aaPredicted RBP10.77□□□□□ -0.69
SHMT2-230ENST00000557427 EMC6Q9BV81 110 aa10.77□□□□□ -0.69
SHMT2-230ENST00000557427 MIXL1Q9H2W2 232 aa10.77□□□□□ -0.69
SHMT2-230ENST00000557427 SP140LQ9H930 580 aa10.77□□□□□ -0.69
SHMT2-230ENST00000557427 SRA1Q9HD15 236 aaKnown RBP10.77□□□□□ -0.69
SHMT2-230ENST00000557427 ABCB10Q9NRK6 738 aa10.77□□□□□ -0.69
SHMT2-230ENST00000557427 B3GAT1Q9P2W7 334 aa10.77□□□□□ -0.69
SHMT2-230ENST00000557427 TMEM14AQ9Y6G1 99 aa10.77□□□□□ -0.69
SHMT2-230ENST00000557427 V9GYH0 126 aa10.77□□□□□ -0.69
SHMT2-230ENST00000557427 RYR3Q15413 4870 aa10.77□□□□□ -0.69
SHMT2-230ENST00000557427 A0A1W2PRG6 482 aa10.76□□□□□ -0.69
SHMT2-230ENST00000557427 SHISA3A0PJX4 238 aa10.76□□□□□ -0.69
SHMT2-230ENST00000557427 OR6C65A6NJZ3 312 aa10.76□□□□□ -0.69
SHMT2-230ENST00000557427 DCTN6O00399 190 aa10.76□□□□□ -0.69
SHMT2-230ENST00000557427 MAGEB3O15480 346 aa10.76□□□□□ -0.69
SHMT2-230ENST00000557427 WNT11O96014 354 aa10.76□□□□□ -0.69
SHMT2-230ENST00000557427 TACSTD2P09758 323 aa10.76□□□□□ -0.69
SHMT2-230ENST00000557427 MYL9P24844 172 aa10.76□□□□□ -0.69
SHMT2-230ENST00000557427 PTBP1P26599 531 aaKnown RBP eCLIP10.76□□□□□ -0.69
SHMT2-230ENST00000557427 PDLIM4P50479 330 aa10.76□□□□□ -0.69
SHMT2-230ENST00000557427 ARF1P84077 181 aaKnown RBP10.76□□□□□ -0.69
SHMT2-230ENST00000557427 EGR3Q06889 387 aa10.76□□□□□ -0.69
SHMT2-230ENST00000557427 PUDPQ08623 228 aa10.76□□□□□ -0.69
SHMT2-230ENST00000557427 KLHL24Q6TFL4 600 aa10.76□□□□□ -0.69
SHMT2-230ENST00000557427 METAP1DQ6UB28 335 aaPredicted RBP10.76□□□□□ -0.69
SHMT2-230ENST00000557427 TREML4Q6UXN2 200 aa10.76□□□□□ -0.69
SHMT2-230ENST00000557427 PEG10Q86TG7 708 aaKnown RBP10.76□□□□□ -0.69
SHMT2-230ENST00000557427 FBXL14Q8N1E6 418 aa10.76□□□□□ -0.69
SHMT2-230ENST00000557427 GPR137CQ8N3F9 429 aa10.76□□□□□ -0.69
SHMT2-230ENST00000557427 ZNF511Q8NB15 262 aa10.76□□□□□ -0.69
SHMT2-230ENST00000557427 ADPRHL1Q8NDY3 354 aa10.76□□□□□ -0.69
SHMT2-230ENST00000557427 C1orf162Q8NEQ5 155 aaPredicted RBP10.76□□□□□ -0.69
SHMT2-230ENST00000557427 OR1K1Q8NGR3 316 aa10.76□□□□□ -0.69
SHMT2-230ENST00000557427 BCL2L2Q92843 193 aaPredicted RBP10.76□□□□□ -0.69
SHMT2-230ENST00000557427 GHSRQ92847 366 aa10.76□□□□□ -0.69
SHMT2-230ENST00000557427 KCTD12Q96CX2 325 aaKnown RBP10.76□□□□□ -0.69
SHMT2-230ENST00000557427 TSSK2Q96PF2 358 aa10.76□□□□□ -0.69
SHMT2-230ENST00000557427 SDHCQ99643 169 aaPredicted RBP10.76□□□□□ -0.69
SHMT2-230ENST00000557427 ATF6BQ99941 703 aa10.76□□□□□ -0.69
SHMT2-230ENST00000557427 PIMREGQ9BSJ6 248 aa10.76□□□□□ -0.69
SHMT2-230ENST00000557427 SYT4Q9H2B2 425 aa10.76□□□□□ -0.69
SHMT2-230ENST00000557427 WDR76Q9H967 626 aa10.76□□□□□ -0.69
SHMT2-230ENST00000557427 ABCB9Q9NP78 766 aa10.76□□□□□ -0.69
SHMT2-230ENST00000557427 MED29Q9NX70 200 aa10.76□□□□□ -0.69
SHMT2-230ENST00000557427 GNG8Q9UK08 70 aa10.76□□□□□ -0.69
SHMT2-230ENST00000557427 B9D1Q9UPM9 204 aa10.76□□□□□ -0.69
SHMT2-230ENST00000557427 AMDHD2Q9Y303 409 aa10.76□□□□□ -0.69
SHMT2-230ENST00000557427 GRIP1Q9Y3R0 1128 aa10.76□□□□□ -0.69
SHMT2-230ENST00000557427 ATP23Q9Y6H3 246 aa10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms