RNA–Protein interactions for RNA: ENST00000557076.5

SCFD1-223, Transcript of sec1 family domain containing 1, human

TSL 3

Gene SCFD1, Length 743 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SCFD1-223	ENST00000557076	MYL2	P10916	166 aa		3.77	□□□□□ -1.81
SCFD1-223	ENST00000557076	G6PD	P11413	515 aa		3.77	□□□□□ -1.81
SCFD1-223	ENST00000557076	ETFA	P13804	333 aa		3.77	□□□□□ -1.81
SCFD1-223	ENST00000557076	PAICS	P22234	425 aa	Known RBP	3.77	□□□□□ -1.81
SCFD1-223	ENST00000557076	SAA4	P35542	130 aa		3.77	□□□□□ -1.81
SCFD1-223	ENST00000557076	CHI3L1	P36222	383 aa	Predicted RBP	3.77	□□□□□ -1.81
SCFD1-223	ENST00000557076	RGS6	P49758	472 aa		3.77	□□□□□ -1.81
SCFD1-223	ENST00000557076	PCBD1	P61457	104 aa		3.77	□□□□□ -1.81
SCFD1-223	ENST00000557076	RPS16	P62249	146 aa	Known RBP	3.77	□□□□□ -1.81
SCFD1-223	ENST00000557076	HOXC5	Q00444	222 aa		3.77	□□□□□ -1.81
SCFD1-223	ENST00000557076	EMX2	Q04743	252 aa		3.77	□□□□□ -1.81
SCFD1-223	ENST00000557076	PMS2P11	Q13670	270 aa		3.77	□□□□□ -1.81
SCFD1-223	ENST00000557076	TAF11	Q15544	211 aa		3.77	□□□□□ -1.81
SCFD1-223	ENST00000557076	LRRC75B	Q2VPJ9	315 aa		3.77	□□□□□ -1.81
SCFD1-223	ENST00000557076	ALG10B	Q5I7T1	473 aa		3.77	□□□□□ -1.81
SCFD1-223	ENST00000557076	CLEC12A	Q5QGZ9	265 aa		3.77	□□□□□ -1.81
SCFD1-223	ENST00000557076	C10orf128	Q5T292	105 aa		3.77	□□□□□ -1.81
SCFD1-223	ENST00000557076	NCR3LG1	Q68D85	454 aa		3.77	□□□□□ -1.81
SCFD1-223	ENST00000557076	ZFAND6	Q6FIF0	208 aa		3.77	□□□□□ -1.81
SCFD1-223	ENST00000557076	FBXW12	Q6X9E4	464 aa		3.77	□□□□□ -1.81
SCFD1-223	ENST00000557076	ADAMTSL5	Q6ZMM2	481 aa		3.77	□□□□□ -1.81
SCFD1-223	ENST00000557076	LRRC34	Q8IZ02	419 aa		3.77	□□□□□ -1.81
SCFD1-223	ENST00000557076		Q8N7P7	452 aa		3.77	□□□□□ -1.81
SCFD1-223	ENST00000557076	OR51G2	Q8NGK0	314 aa		3.77	□□□□□ -1.81
SCFD1-223	ENST00000557076	OR11L1	Q8NGX0	322 aa		3.77	□□□□□ -1.81
SCFD1-223	ENST00000557076	DAZAP1	Q96EP5	407 aa	Known RBP	3.77	□□□□□ -1.81
SCFD1-223	ENST00000557076	TEX37	Q96LM6	180 aa		3.77	□□□□□ -1.81
SCFD1-223	ENST00000557076	ZNF582	Q96NG8	517 aa	Predicted RBP	3.77	□□□□□ -1.81
SCFD1-223	ENST00000557076	MOGAT1	Q96PD6	335 aa		3.77	□□□□□ -1.81
SCFD1-223	ENST00000557076	WNT5B	Q9H1J7	359 aa		3.77	□□□□□ -1.81
SCFD1-223	ENST00000557076	NINJ2	Q9NZG7	142 aa		3.77	□□□□□ -1.81
SCFD1-223	ENST00000557076	CTSZ	Q9UBR2	303 aa		3.77	□□□□□ -1.81
SCFD1-223	ENST00000557076	RPS6KB2	Q9UBS0	482 aa		3.77	□□□□□ -1.81
SCFD1-223	ENST00000557076	ZNF443	Q9Y2A4	671 aa	Predicted RBP	3.77	□□□□□ -1.81
SCFD1-223	ENST00000557076	SAR1B	Q9Y6B6	198 aa		3.77	□□□□□ -1.81
SCFD1-223	ENST00000557076	SORL1	Q92673	2214 aa		3.76	□□□□□ -1.81
SCFD1-223	ENST00000557076	ELOVL7	A1L3X0	281 aa		3.76	□□□□□ -1.81
SCFD1-223	ENST00000557076	C11orf98	E9PRG8	122 aa		3.76	□□□□□ -1.81
SCFD1-223	ENST00000557076		F5H5P2	479 aa		3.76	□□□□□ -1.81
SCFD1-223	ENST00000557076	DVL1	O14640	695 aa		3.76	□□□□□ -1.81
SCFD1-223	ENST00000557076	CHST1	O43916	411 aa		3.76	□□□□□ -1.81
SCFD1-223	ENST00000557076	FCN3	O75636	299 aa		3.76	□□□□□ -1.81
SCFD1-223	ENST00000557076	SERPINI2	O75830	405 aa		3.76	□□□□□ -1.81
SCFD1-223	ENST00000557076	CPSF4	O95639	269 aa	Known RBP	3.76	□□□□□ -1.81
SCFD1-223	ENST00000557076	CPA3	P15088	417 aa		3.76	□□□□□ -1.81
SCFD1-223	ENST00000557076	PPIF	P30405	207 aa	Known RBP	3.76	□□□□□ -1.81
SCFD1-223	ENST00000557076	CDA	P32320	146 aa		3.76	□□□□□ -1.81
SCFD1-223	ENST00000557076	GUCA1A	P43080	201 aa	Predicted RBP	3.76	□□□□□ -1.81
SCFD1-223	ENST00000557076	VEGFC	P49767	419 aa		3.76	□□□□□ -1.81
SCFD1-223	ENST00000557076	CRISP3	P54108	245 aa		3.76	□□□□□ -1.81
SCFD1-223	ENST00000557076	MAD2L1	Q13257	205 aa	Predicted RBP	3.76	□□□□□ -1.81
SCFD1-223	ENST00000557076	MAB21L1	Q13394	359 aa		3.76	□□□□□ -1.81
SCFD1-223	ENST00000557076	LY6E	Q16553	131 aa		3.76	□□□□□ -1.81
SCFD1-223	ENST00000557076	SGCA	Q16586	387 aa		3.76	□□□□□ -1.81
SCFD1-223	ENST00000557076	CCDC153	Q494R4	210 aa		3.76	□□□□□ -1.81
SCFD1-223	ENST00000557076	CENPV	Q7Z7K6	275 aa	Predicted RBP	3.76	□□□□□ -1.81
SCFD1-223	ENST00000557076	SBSPON	Q8IVN8	264 aa		3.76	□□□□□ -1.81
SCFD1-223	ENST00000557076	TRIML2	Q8N7C3	387 aa		3.76	□□□□□ -1.81
SCFD1-223	ENST00000557076	NANOGP1	Q8N7R0	232 aa		3.76	□□□□□ -1.81
SCFD1-223	ENST00000557076	RNF152	Q8N8N0	203 aa		3.76	□□□□□ -1.81
SCFD1-223	ENST00000557076	FNDC5	Q8NAU1	212 aa		3.76	□□□□□ -1.81
SCFD1-223	ENST00000557076	PCYOX1L	Q8NBM8	494 aa		3.76	□□□□□ -1.81
SCFD1-223	ENST00000557076	OR10AD1	Q8NGE0	317 aa		3.76	□□□□□ -1.81
SCFD1-223	ENST00000557076	OR5L1	Q8NGL2	311 aa		3.76	□□□□□ -1.81
SCFD1-223	ENST00000557076	SLC38A5	Q8WUX1	472 aa		3.76	□□□□□ -1.81
SCFD1-223	ENST00000557076	TWIST2	Q8WVJ9	160 aa		3.76	□□□□□ -1.81
SCFD1-223	ENST00000557076	C17orf50	Q8WW18	174 aa		3.76	□□□□□ -1.81
SCFD1-223	ENST00000557076	NABP1	Q96AH0	204 aa		3.76	□□□□□ -1.81
SCFD1-223	ENST00000557076	TESC	Q96BS2	214 aa		3.76	□□□□□ -1.81
SCFD1-223	ENST00000557076	NMD3	Q96D46	503 aa	Known RBP	3.76	□□□□□ -1.81
SCFD1-223	ENST00000557076	CCDC115	Q96NT0	180 aa		3.76	□□□□□ -1.81
SCFD1-223	ENST00000557076	ZNF347	Q96SE7	839 aa		3.76	□□□□□ -1.81
SCFD1-223	ENST00000557076	TMEM43	Q9BTV4	400 aa		3.76	□□□□□ -1.81
SCFD1-223	ENST00000557076	C1orf50	Q9BV19	199 aa		3.76	□□□□□ -1.81
SCFD1-223	ENST00000557076	RAB17	Q9H0T7	212 aa		3.76	□□□□□ -1.81
SCFD1-223	ENST00000557076	TSPYL1	Q9H0U9	437 aa		3.76	□□□□□ -1.81
SCFD1-223	ENST00000557076	MMADHC	Q9H3L0	296 aa	Predicted RBP	3.76	□□□□□ -1.81
SCFD1-223	ENST00000557076	MUC13	Q9H3R2	512 aa		3.76	□□□□□ -1.81
SCFD1-223	ENST00000557076	SMURF2	Q9HAU4	748 aa		3.76	□□□□□ -1.81
SCFD1-223	ENST00000557076	NANS	Q9NR45	359 aa		3.76	□□□□□ -1.81
SCFD1-223	ENST00000557076	SIRT7	Q9NRC8	400 aa		3.76	□□□□□ -1.81
SCFD1-223	ENST00000557076	TMEM100	Q9NV29	134 aa		3.76	□□□□□ -1.81
SCFD1-223	ENST00000557076	THUMPD1	Q9NXG2	353 aa	Known RBP	3.76	□□□□□ -1.81
SCFD1-223	ENST00000557076	ASIC5	Q9NY37	505 aa		3.76	□□□□□ -1.81
SCFD1-223	ENST00000557076	SELENON	Q9NZV5	590 aa		3.76	□□□□□ -1.81
SCFD1-223	ENST00000557076	BTNL2	Q9UIR0	455 aa		3.76	□□□□□ -1.81
SCFD1-223	ENST00000557076	EMCN	Q9ULC0	261 aa		3.76	□□□□□ -1.81
SCFD1-223	ENST00000557076	UGT2A1	Q9Y4X1	527 aa		3.76	□□□□□ -1.81
SCFD1-223	ENST00000557076	TANC2	Q9HCD6	1990 aa		3.76	□□□□□ -1.81
SCFD1-223	ENST00000557076	IGKV2D-30	A0A075B6S6	120 aa		3.75	□□□□□ -1.81
SCFD1-223	ENST00000557076		A0A0B4J2E0	115 aa		3.75	□□□□□ -1.81
SCFD1-223	ENST00000557076	IGHV3-64D	A0A0J9YX35	117 aa		3.75	□□□□□ -1.81
SCFD1-223	ENST00000557076		A0A1B0GX12	115 aa		3.75	□□□□□ -1.81
SCFD1-223	ENST00000557076		A0A1W2PRD5	423 aa		3.75	□□□□□ -1.81
SCFD1-223	ENST00000557076		A0A1W2PRF3	423 aa		3.75	□□□□□ -1.81
SCFD1-223	ENST00000557076		A0A1W2PRM7	423 aa		3.75	□□□□□ -1.81
SCFD1-223	ENST00000557076	GMNC	A6NCL1	334 aa		3.75	□□□□□ -1.81
SCFD1-223	ENST00000557076	OOEP	A6NGQ2	149 aa		3.75	□□□□□ -1.81
SCFD1-223	ENST00000557076	NKX6-3	A6NJ46	265 aa		3.75	□□□□□ -1.81
SCFD1-223	ENST00000557076	C12orf71	A8MTZ7	269 aa		3.75	□□□□□ -1.81

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