RNA–Protein interactions for RNA: ENST00000556992.1

SRP54-212, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 529 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-212ENST00000556992 CELSR3Q9NYQ7 3312 aa3.92□□□□□ -1.78
SRP54-212ENST00000556992 A0A0G2JK05 382 aa3.91□□□□□ -1.78
SRP54-212ENST00000556992 A0A0J9YW62 118 aa3.91□□□□□ -1.78
SRP54-212ENST00000556992 SPAARA0A1B0GVQ0 90 aa3.91□□□□□ -1.78
SRP54-212ENST00000556992 A0A1W2PPL8 197 aa3.91□□□□□ -1.78
SRP54-212ENST00000556992 FUOMA2VDF0 154 aa3.91□□□□□ -1.78
SRP54-212ENST00000556992 SMIM30A4D0T7 59 aa3.91□□□□□ -1.78
SRP54-212ENST00000556992 OR6C65A6NJZ3 312 aa3.91□□□□□ -1.78
SRP54-212ENST00000556992 PRR32B1ATL7 298 aa3.91□□□□□ -1.78
SRP54-212ENST00000556992 AIPO00170 330 aa3.91□□□□□ -1.78
SRP54-212ENST00000556992 PIN1P1O15428 100 aa3.91□□□□□ -1.78
SRP54-212ENST00000556992 DHHO43323 396 aa3.91□□□□□ -1.78
SRP54-212ENST00000556992 SULT1B1O43704 296 aa3.91□□□□□ -1.78
SRP54-212ENST00000556992 SLC43A1O75387 559 aa3.91□□□□□ -1.78
SRP54-212ENST00000556992 NEURL1O76050 574 aa3.91□□□□□ -1.78
SRP54-212ENST00000556992 WDPCPO95876 746 aa3.91□□□□□ -1.78
SRP54-212ENST00000556992 SP1P08047 785 aa3.91□□□□□ -1.78
SRP54-212ENST00000556992 PRKAR1AP10644 381 aa3.91□□□□□ -1.78
SRP54-212ENST00000556992 IL7P13232 177 aa3.91□□□□□ -1.78
SRP54-212ENST00000556992 CEACAM1P13688 526 aa3.91□□□□□ -1.78
SRP54-212ENST00000556992 ACHEP22303 614 aa3.91□□□□□ -1.78
SRP54-212ENST00000556992 TCEA1P23193 301 aaKnown RBP3.91□□□□□ -1.78
SRP54-212ENST00000556992 GDF1P27539 372 aa3.91□□□□□ -1.78
SRP54-212ENST00000556992 CSNK1A1P48729 337 aa3.91□□□□□ -1.78
SRP54-212ENST00000556992 ZNF84P51523 738 aa3.91□□□□□ -1.78
SRP54-212ENST00000556992 BCAP31P51572 246 aa3.91□□□□□ -1.78
SRP54-212ENST00000556992 ZNF133P52736 654 aaPredicted RBP3.91□□□□□ -1.78
SRP54-212ENST00000556992 ART1P52961 327 aa3.91□□□□□ -1.78
SRP54-212ENST00000556992 SUCLG1P53597 346 aaKnown RBP3.91□□□□□ -1.78
SRP54-212ENST00000556992 FOXG1P55316 489 aaPredicted RBP3.91□□□□□ -1.78
SRP54-212ENST00000556992 CLDN17P56750 224 aa3.91□□□□□ -1.78
SRP54-212ENST00000556992 FMODQ06828 376 aa3.91□□□□□ -1.78
SRP54-212ENST00000556992 FOXO1Q12778 655 aa3.91□□□□□ -1.78
SRP54-212ENST00000556992 ECH1Q13011 328 aa3.91□□□□□ -1.78
SRP54-212ENST00000556992 CAMK2DQ13557 499 aa3.91□□□□□ -1.78
SRP54-212ENST00000556992 IL18Q14116 193 aa3.91□□□□□ -1.78
SRP54-212ENST00000556992 HLXQ14774 488 aaPredicted RBP3.91□□□□□ -1.78
SRP54-212ENST00000556992 OR1C1Q15619 314 aa3.91□□□□□ -1.78
SRP54-212ENST00000556992 SGCAQ16586 387 aa3.91□□□□□ -1.78
SRP54-212ENST00000556992 BAK1Q16611 211 aa3.91□□□□□ -1.78
SRP54-212ENST00000556992 ST3GAL2Q16842 350 aa3.91□□□□□ -1.78
SRP54-212ENST00000556992 HYAL4Q2M3T9 481 aa3.91□□□□□ -1.78
SRP54-212ENST00000556992 WDR38Q5JTN6 314 aa3.91□□□□□ -1.78
SRP54-212ENST00000556992 C10orf128Q5T292 105 aa3.91□□□□□ -1.78
SRP54-212ENST00000556992 FAM27D1Q5T7N8 215 aa3.91□□□□□ -1.78
SRP54-212ENST00000556992 BCL2L15Q5TBC7 163 aa3.91□□□□□ -1.78
SRP54-212ENST00000556992 FAM27BQ5VT28 67 aa3.91□□□□□ -1.78
SRP54-212ENST00000556992 CARD17Q5XLA6 110 aa3.91□□□□□ -1.78
SRP54-212ENST00000556992 TRIQKQ629K1 86 aa3.91□□□□□ -1.78
SRP54-212ENST00000556992 PYHIN1Q6K0P9 492 aa3.91□□□□□ -1.78
SRP54-212ENST00000556992 STAC2Q6ZMT1 411 aa3.91□□□□□ -1.78
SRP54-212ENST00000556992 DCXRQ7Z4W1 244 aa3.91□□□□□ -1.78
SRP54-212ENST00000556992 LUZP2Q86TE4 346 aa3.91□□□□□ -1.78
SRP54-212ENST00000556992 ZNF554Q86TJ5 538 aa3.91□□□□□ -1.78
SRP54-212ENST00000556992 NR2C2APQ86WQ0 139 aa3.91□□□□□ -1.78
SRP54-212ENST00000556992 CATSPERDQ86XM0 798 aa3.91□□□□□ -1.78
SRP54-212ENST00000556992 SNX29P2Q8IUI4 249 aa3.91□□□□□ -1.78
SRP54-212ENST00000556992 C20orf196Q8IYI0 205 aa3.91□□□□□ -1.78
SRP54-212ENST00000556992 ELMOD2Q8IZ81 293 aa3.91□□□□□ -1.78
SRP54-212ENST00000556992 RDH10Q8IZV5 341 aa3.91□□□□□ -1.78
SRP54-212ENST00000556992 PRSS35Q8N3Z0 413 aa3.91□□□□□ -1.78
SRP54-212ENST00000556992 GALNT16Q8N428 558 aa3.91□□□□□ -1.78
SRP54-212ENST00000556992 ZNF433Q8N7K0 673 aaPredicted RBP3.91□□□□□ -1.78
SRP54-212ENST00000556992 ZIC4Q8N9L1 334 aa3.91□□□□□ -1.78
SRP54-212ENST00000556992 FAM83FQ8NEG4 500 aaPredicted RBP3.91□□□□□ -1.78
SRP54-212ENST00000556992 NOXO1Q8NFA2 376 aa3.91□□□□□ -1.78
SRP54-212ENST00000556992 GJC3Q8NFK1 279 aa3.91□□□□□ -1.78
SRP54-212ENST00000556992 OR2M7Q8NG81 312 aa3.91□□□□□ -1.78
SRP54-212ENST00000556992 OR5D14Q8NGL3 314 aa3.91□□□□□ -1.78
SRP54-212ENST00000556992 OR2V1Q8NHB1 315 aa3.91□□□□□ -1.78
SRP54-212ENST00000556992 TRMT10AQ8TBZ6 339 aaKnown RBP3.91□□□□□ -1.78
SRP54-212ENST00000556992 ST7LQ8TDW4 575 aa3.91□□□□□ -1.78
SRP54-212ENST00000556992 RAB40AQ8WXH6 277 aa3.91□□□□□ -1.78
SRP54-212ENST00000556992 HAS2Q92819 552 aa3.91□□□□□ -1.78
SRP54-212ENST00000556992 SLAMF6Q96DU3 332 aa3.91□□□□□ -1.78
SRP54-212ENST00000556992 OR2M2Q96R28 347 aa3.91□□□□□ -1.78
SRP54-212ENST00000556992 AMELYQ99218 206 aa3.91□□□□□ -1.78
SRP54-212ENST00000556992 SDHCQ99643 169 aaPredicted RBP3.91□□□□□ -1.78
SRP54-212ENST00000556992 THAP7Q9BT49 309 aaPredicted RBP3.91□□□□□ -1.78
SRP54-212ENST00000556992 TTTY10Q9BZA0 68 aa3.91□□□□□ -1.78
SRP54-212ENST00000556992 HDHD2Q9H0R4 259 aa3.91□□□□□ -1.78
SRP54-212ENST00000556992 ABCG5Q9H222 651 aa3.91□□□□□ -1.78
SRP54-212ENST00000556992 B3GAT2Q9NPZ5 323 aa3.91□□□□□ -1.78
SRP54-212ENST00000556992 JKAMPQ9P055 326 aa3.91□□□□□ -1.78
SRP54-212ENST00000556992 EXTL2Q9UBQ6 330 aa3.91□□□□□ -1.78
SRP54-212ENST00000556992 IL17BQ9UHF5 180 aa3.91□□□□□ -1.78
SRP54-212ENST00000556992 OR52A1Q9UKL2 312 aa3.91□□□□□ -1.78
SRP54-212ENST00000556992 HHLA2Q9UM44 414 aa3.91□□□□□ -1.78
SRP54-212ENST00000556992 SPATA2Q9UM82 520 aa3.91□□□□□ -1.78
SRP54-212ENST00000556992 FOXJ3Q9UPW0 622 aa3.91□□□□□ -1.78
SRP54-212ENST00000556992 DHDHQ9UQ10 334 aa3.91□□□□□ -1.78
SRP54-212ENST00000556992 RCE1Q9Y256 329 aa3.91□□□□□ -1.78
SRP54-212ENST00000556992 KLF13Q9Y2Y9 288 aaPredicted RBP3.91□□□□□ -1.78
SRP54-212ENST00000556992 AK6Q9Y3D8 172 aaKnown RBP3.91□□□□□ -1.78
SRP54-212ENST00000556992 ETV7Q9Y603 341 aa3.91□□□□□ -1.78
SRP54-212ENST00000556992 SPAG17Q6Q759 2223 aa3.91□□□□□ -1.78
SRP54-212ENST00000556992 NUP214P35658 2090 aaPredicted RBP3.91□□□□□ -1.78
SRP54-212ENST00000556992 DOCK9Q9BZ29 2069 aa3.91□□□□□ -1.78
SRP54-212ENST00000556992 LRP4O75096 1905 aa3.91□□□□□ -1.78
SRP54-212ENST00000556992 CACNA1IQ9P0X4 2223 aa3.9□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms