RNA–Protein interactions for RNA: ENST00000556952.3

SIX4-203, Transcript of SIX homeobox 4, humanhuman

TSL 5

Gene SIX4, Length 1,573 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4-203ENST00000556952 COQ3Q9NZJ6 369 aa20.57■□□□□ 0.88
SIX4-203ENST00000556952 CRNNQ9UBG3 495 aaPredicted RBP20.57■□□□□ 0.88
SIX4-203ENST00000556952 SLC25A15Q9Y619 301 aa20.57■□□□□ 0.88
SIX4-203ENST00000556952 XRCC2O43543 280 aa20.56■□□□□ 0.88
SIX4-203ENST00000556952 FSTP19883 344 aa20.56■□□□□ 0.88
SIX4-203ENST00000556952 CHRNB4P30926 498 aa20.56■□□□□ 0.88
SIX4-203ENST00000556952 IDH3GP51553 393 aaPredicted RBP20.56■□□□□ 0.88
SIX4-203ENST00000556952 SLC25A35Q3KQZ1 300 aa20.56■□□□□ 0.88
SIX4-203ENST00000556952 APOBEC3DQ96AK3 386 aaPredicted RBP20.56■□□□□ 0.88
SIX4-203ENST00000556952 ACTR6Q9GZN1 396 aa20.56■□□□□ 0.88
SIX4-203ENST00000556952 TPK1Q9H3S4 243 aa20.56■□□□□ 0.88
SIX4-203ENST00000556952 TCF7L1Q9HCS4 588 aa20.56■□□□□ 0.88
SIX4-203ENST00000556952 LOC390937A0A1W2PQ73 354 aa20.55■□□□□ 0.88
SIX4-203ENST00000556952 J3QW42 95 aa20.55■□□□□ 0.88
SIX4-203ENST00000556952 MTRF1O75570 445 aaKnown RBP20.55■□□□□ 0.88
SIX4-203ENST00000556952 CROCCP3Q8IVE0 287 aa20.55■□□□□ 0.88
SIX4-203ENST00000556952 ZNF808Q8N4W9 903 aaPredicted RBP20.55■□□□□ 0.88
SIX4-203ENST00000556952 LYZL4Q96KX0 146 aa20.55■□□□□ 0.88
SIX4-203ENST00000556952 CKLFQ9UBR5 152 aa20.55■□□□□ 0.88
SIX4-203ENST00000556952 A3GALT2U3KPV4 340 aa20.55■□□□□ 0.88
SIX4-203ENST00000556952 HECTD1Q9ULT8 2610 aa20.55■□□□□ 0.88
SIX4-203ENST00000556952 C5orf63A6NC05 138 aa20.55■□□□□ 0.88
SIX4-203ENST00000556952 DHRS7CA6NNS2 312 aa20.55■□□□□ 0.88
SIX4-203ENST00000556952 PDCD5O14737 125 aa20.55■□□□□ 0.88
SIX4-203ENST00000556952 ICMTO60725 284 aa20.55■□□□□ 0.88
SIX4-203ENST00000556952 DHRS3O75911 302 aa20.55■□□□□ 0.88
SIX4-203ENST00000556952 IGLV1-44P01699 117 aa20.55■□□□□ 0.88
SIX4-203ENST00000556952 CLEC2LP0C7M8 214 aa20.55■□□□□ 0.88
SIX4-203ENST00000556952 CCL2P13500 99 aa20.55■□□□□ 0.88
SIX4-203ENST00000556952 RAB3BP20337 219 aa20.55■□□□□ 0.88
SIX4-203ENST00000556952 ASCL1P50553 236 aa20.55■□□□□ 0.88
SIX4-203ENST00000556952 FAM27E3Q08E93 113 aa20.55■□□□□ 0.88
SIX4-203ENST00000556952 HNRNPA0Q13151 305 aaKnown RBP20.55■□□□□ 0.88
SIX4-203ENST00000556952 C3orf36Q3SXR2 165 aa20.55■□□□□ 0.88
SIX4-203ENST00000556952 SSX8Q7RTT4 187 aa20.55■□□□□ 0.88
SIX4-203ENST00000556952 PARP16Q8N5Y8 322 aa20.55■□□□□ 0.88
SIX4-203ENST00000556952 AKAP1Q92667 903 aaKnown RBP eCLIP20.55■□□□□ 0.88
SIX4-203ENST00000556952 SGK3Q96BR1 496 aa20.55■□□□□ 0.88
SIX4-203ENST00000556952 MUCL1Q96DR8 90 aa20.55■□□□□ 0.88
SIX4-203ENST00000556952 REEP6Q96HR9 211 aa20.55■□□□□ 0.88
SIX4-203ENST00000556952 FAM71F1Q96KD3 344 aaPredicted RBP20.55■□□□□ 0.88
SIX4-203ENST00000556952 TSC22D3Q99576 134 aa20.55■□□□□ 0.88
SIX4-203ENST00000556952 FOXJ3Q9UPW0 622 aa20.55■□□□□ 0.88
SIX4-203ENST00000556952 V9GYS6 101 aa20.55■□□□□ 0.88
SIX4-203ENST00000556952 A1L4Q6 167 aa20.54■□□□□ 0.88
SIX4-203ENST00000556952 C16orf97H3BN30 126 aa20.54■□□□□ 0.88
SIX4-203ENST00000556952 CLPXO76031 633 aa20.54■□□□□ 0.88
SIX4-203ENST00000556952 CELA3BP08861 270 aa20.54■□□□□ 0.88
SIX4-203ENST00000556952 CFL1P23528 166 aaKnown RBP20.54■□□□□ 0.88
SIX4-203ENST00000556952 ZNF404Q494X3 552 aa20.54■□□□□ 0.88
SIX4-203ENST00000556952 GLYATL3Q5SZD4 288 aa20.54■□□□□ 0.88
SIX4-203ENST00000556952 OR14K1Q8NGZ2 314 aa20.54■□□□□ 0.88
SIX4-203ENST00000556952 SPSB4Q96A44 273 aa20.54■□□□□ 0.88
SIX4-203ENST00000556952 BARHL1Q9BZE3 327 aa20.54■□□□□ 0.88
SIX4-203ENST00000556952 NXF2Q9GZY0 626 aaKnown RBP20.54■□□□□ 0.88
SIX4-203ENST00000556952 PLEKHA1Q9HB21 404 aa20.54■□□□□ 0.88
SIX4-203ENST00000556952 CDH20Q9HBT6 801 aa20.54■□□□□ 0.88
SIX4-203ENST00000556952 TBCCD1Q9NVR7 557 aa20.54■□□□□ 0.88
SIX4-203ENST00000556952 PMF1-BGLAPU3KQ54 211 aa20.54■□□□□ 0.88
SIX4-203ENST00000556952 CLDN1O95832 211 aa20.53■□□□□ 0.88
SIX4-203ENST00000556952 CCKARP32238 428 aa20.53■□□□□ 0.88
SIX4-203ENST00000556952 PPA1Q15181 289 aa20.53■□□□□ 0.88
SIX4-203ENST00000556952 MYPOPQ86VE0 399 aaPredicted RBP20.53■□□□□ 0.88
SIX4-203ENST00000556952 SERPINA12Q8IW75 414 aa20.53■□□□□ 0.88
SIX4-203ENST00000556952 ITFG2Q969R8 447 aa20.53■□□□□ 0.88
SIX4-203ENST00000556952 C10orf35Q96D05 121 aa20.53■□□□□ 0.88
SIX4-203ENST00000556952 ORAI1Q96D31 301 aa20.53■□□□□ 0.88
SIX4-203ENST00000556952 PSMG3-AS1Q96PY0 264 aa20.53■□□□□ 0.88
SIX4-203ENST00000556952 OPA3Q9H6K4 179 aa20.53■□□□□ 0.88
SIX4-203ENST00000556952 ZNF20P17024 532 aa20.52■□□□□ 0.88
SIX4-203ENST00000556952 IGFBP3P17936 291 aaPredicted RBP20.52■□□□□ 0.88
SIX4-203ENST00000556952 MALLQ13021 153 aa20.52■□□□□ 0.88
SIX4-203ENST00000556952 FBXL19-AS1Q494R0 122 aa20.52■□□□□ 0.88
SIX4-203ENST00000556952 OR2AE1Q8NHA4 323 aa20.52■□□□□ 0.88
SIX4-203ENST00000556952 MCFD2Q8NI22 146 aa20.52■□□□□ 0.88
SIX4-203ENST00000556952 AP3S1Q92572 193 aa20.52■□□□□ 0.88
SIX4-203ENST00000556952 FGGYQ96C11 551 aa20.52■□□□□ 0.88
SIX4-203ENST00000556952 MMP27Q9H306 513 aa20.52■□□□□ 0.88
SIX4-203ENST00000556952 TRAV8-7A0A075B6U6 113 aa20.51■□□□□ 0.87
SIX4-203ENST00000556952 LMX1BO60663 402 aa20.51■□□□□ 0.87
SIX4-203ENST00000556952 WNT5AP41221 380 aa20.51■□□□□ 0.87
SIX4-203ENST00000556952 TAB1Q15750 504 aa20.51■□□□□ 0.87
SIX4-203ENST00000556952 XKRXQ6PP77 449 aa20.51■□□□□ 0.87
SIX4-203ENST00000556952 LINC00299Q6ZSB3 139 aa20.51■□□□□ 0.87
SIX4-203ENST00000556952 LRRTM1Q86UE6 522 aa20.51■□□□□ 0.87
SIX4-203ENST00000556952 PAQR4Q8N4S7 273 aaPredicted RBP20.51■□□□□ 0.87
SIX4-203ENST00000556952 OR5L1Q8NGL2 311 aa20.51■□□□□ 0.87
SIX4-203ENST00000556952 SOX7Q9BT81 388 aa20.51■□□□□ 0.87
SIX4-203ENST00000556952 EIF3KQ9UBQ5 218 aaKnown RBP20.51■□□□□ 0.87
SIX4-203ENST00000556952 RTTNQ86VV8 2226 aa20.51■□□□□ 0.87
SIX4-203ENST00000556952 A0A075B6Q4 140 aa20.51■□□□□ 0.87
SIX4-203ENST00000556952 SMIM30A4D0T7 59 aa20.51■□□□□ 0.87
SIX4-203ENST00000556952 NOTOA8MTQ0 251 aa20.51■□□□□ 0.87
SIX4-203ENST00000556952 NCR1O76036 304 aa20.51■□□□□ 0.87
SIX4-203ENST00000556952 CECR9P0C854 216 aa20.51■□□□□ 0.87
SIX4-203ENST00000556952 AGAP20933 346 aa20.51■□□□□ 0.87
SIX4-203ENST00000556952 HCFC1P51610 2035 aa20.51■□□□□ 0.87
SIX4-203ENST00000556952 PSMD7P51665 324 aa20.51■□□□□ 0.87
SIX4-203ENST00000556952 LSAMPQ13449 338 aa20.51■□□□□ 0.87
SIX4-203ENST00000556952 ASPHD2Q6ICH7 369 aa20.51■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms