RNA–Protein interactions for RNA: ENST00000556909.1

VIPAS39-209, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

TSL 4

Gene VIPAS39, Length 540 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-209ENST00000556909 GLYATQ6IB77 296 aa15.12■□□□□ 0.01
VIPAS39-209ENST00000556909 ASPHD2Q6ICH7 369 aa15.12■□□□□ 0.01
VIPAS39-209ENST00000556909 ZNF826PQ6ZT77 177 aa15.12■□□□□ 0.01
VIPAS39-209ENST00000556909 LDLRAD3Q86YD5 345 aa15.12■□□□□ 0.01
VIPAS39-209ENST00000556909 FAM90A1Q86YD7 464 aa15.12■□□□□ 0.01
VIPAS39-209ENST00000556909 LINC01006Q8NI28 216 aa15.12■□□□□ 0.01
VIPAS39-209ENST00000556909 RBM4BQ9BQ04 359 aaKnown RBP15.12■□□□□ 0.01
VIPAS39-209ENST00000556909 C1orf123Q9NWV4 160 aa15.12■□□□□ 0.01
VIPAS39-209ENST00000556909 MRPL15Q9P015 296 aaKnown RBP15.12■□□□□ 0.01
VIPAS39-209ENST00000556909 V9GYQ6 96 aa15.12■□□□□ 0.01
VIPAS39-209ENST00000556909 GGT3PA6NGU5 568 aa15.11■□□□□ 0.01
VIPAS39-209ENST00000556909 GADD45GO95257 159 aa15.11■□□□□ 0.01
VIPAS39-209ENST00000556909 SEMG1P04279 462 aa15.11■□□□□ 0.01
VIPAS39-209ENST00000556909 PSKH1P11801 424 aa15.11■□□□□ 0.01
VIPAS39-209ENST00000556909 OTX1P32242 354 aaPredicted RBP15.11■□□□□ 0.01
VIPAS39-209ENST00000556909 PSME3P61289 254 aa15.11■□□□□ 0.01
VIPAS39-209ENST00000556909 KHDRBS1Q07666 443 aaKnown RBP eCLIP15.11■□□□□ 0.01
VIPAS39-209ENST00000556909 BTN2A1Q7KYR7 527 aa15.11■□□□□ 0.01
VIPAS39-209ENST00000556909 GCSAMQ8N6F7 178 aa15.11■□□□□ 0.01
VIPAS39-209ENST00000556909 A6NLC8 198 aa15.1■□□□□ 0.01
VIPAS39-209ENST00000556909 DVL1O14640 695 aa15.1■□□□□ 0.01
VIPAS39-209ENST00000556909 IDH3BO43837 385 aa15.1■□□□□ 0.01
VIPAS39-209ENST00000556909 OR10H3O60404 316 aa15.1■□□□□ 0.01
VIPAS39-209ENST00000556909 CCDC22O60826 627 aa15.1■□□□□ 0.01
VIPAS39-209ENST00000556909 CLPXO76031 633 aa15.1■□□□□ 0.01
VIPAS39-209ENST00000556909 GRPP07492 148 aa15.1■□□□□ 0.01
VIPAS39-209ENST00000556909 ZNF823P16415 610 aa15.1■□□□□ 0.01
VIPAS39-209ENST00000556909 PYCR1P32322 319 aa15.1■□□□□ 0.01
VIPAS39-209ENST00000556909 IER3P46695 156 aa15.1■□□□□ 0.01
VIPAS39-209ENST00000556909 PROK1P58294 105 aa15.1■□□□□ 0.01
VIPAS39-209ENST00000556909 SMIM11AP58511 58 aa15.1■□□□□ 0.01
VIPAS39-209ENST00000556909 ARF6P62330 175 aa15.1■□□□□ 0.01
VIPAS39-209ENST00000556909 SLC35F1Q5T1Q4 408 aa15.1■□□□□ 0.01
VIPAS39-209ENST00000556909 DRAM2Q6UX65 266 aa15.1■□□□□ 0.01
VIPAS39-209ENST00000556909 SCCPDHQ8NBX0 429 aa15.1■□□□□ 0.01
VIPAS39-209ENST00000556909 OR56B2PQ8NGI1 322 aa15.1■□□□□ 0.01
VIPAS39-209ENST00000556909 UBE2FQ969M7 185 aa15.1■□□□□ 0.01
VIPAS39-209ENST00000556909 PKP2Q99959 881 aa15.1■□□□□ 0.01
VIPAS39-209ENST00000556909 CCDC134Q9H6E4 229 aa15.1■□□□□ 0.01
VIPAS39-209ENST00000556909 IGHV3OR15-7A0A075B7D8 119 aa15.09■□□□□ 0.01
VIPAS39-209ENST00000556909 hCG_1807616A0A1W2PRN6 198 aa15.09■□□□□ 0.01
VIPAS39-209ENST00000556909 ECDO95905 644 aaPredicted RBP15.09■□□□□ 0.01
VIPAS39-209ENST00000556909 GSSP48637 474 aa15.09■□□□□ 0.01
VIPAS39-209ENST00000556909 C11orf91Q3C1V1 193 aa15.09■□□□□ 0.01
VIPAS39-209ENST00000556909 TEX36Q5VZQ5 186 aa15.09■□□□□ 0.01
VIPAS39-209ENST00000556909 LYPD4Q6UWN0 246 aa15.09■□□□□ 0.01
VIPAS39-209ENST00000556909 PDZD9Q8IXQ8 264 aa15.09■□□□□ 0.01
VIPAS39-209ENST00000556909 FGFRL1Q8N441 504 aa15.09■□□□□ 0.01
VIPAS39-209ENST00000556909 LNX2Q8N448 690 aa15.09■□□□□ 0.01
VIPAS39-209ENST00000556909 PIP4P2Q8N4L2 257 aa15.09■□□□□ 0.01
VIPAS39-209ENST00000556909 SPERTQ8NA61 448 aa15.09■□□□□ 0.01
VIPAS39-209ENST00000556909 ST8SIA4Q92187 359 aa15.09■□□□□ 0.01
VIPAS39-209ENST00000556909 NSRP1Q9H0G5 558 aaKnown RBP15.09■□□□□ 0.01
VIPAS39-209ENST00000556909 SPAG4Q9NPE6 437 aa15.09■□□□□ 0.01
VIPAS39-209ENST00000556909 RPUSD1Q9UJJ7 312 aaKnown RBP15.09■□□□□ 0.01
VIPAS39-209ENST00000556909 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP15.08■□□□□ 0
VIPAS39-209ENST00000556909 TVP23AA6NH52 213 aa15.08■□□□□ 0
VIPAS39-209ENST00000556909 BHLHE40O14503 412 aa15.08■□□□□ 0
VIPAS39-209ENST00000556909 TSPAN15O95858 294 aa15.08■□□□□ 0
VIPAS39-209ENST00000556909 LHBP01229 141 aa15.08■□□□□ 0
VIPAS39-209ENST00000556909 SLC2A1P11166 492 aa15.08■□□□□ 0
VIPAS39-209ENST00000556909 POU4F2Q12837 409 aa15.08■□□□□ 0
VIPAS39-209ENST00000556909 TAF9Q16594 264 aa15.08■□□□□ 0
VIPAS39-209ENST00000556909 CDONQ4KMG0 1287 aa15.08■□□□□ 0
VIPAS39-209ENST00000556909 VMO1Q7Z5L0 202 aa15.08■□□□□ 0
VIPAS39-209ENST00000556909 RNF148Q8N7C7 305 aa15.08■□□□□ 0
VIPAS39-209ENST00000556909 CYB561A3Q8NBI2 242 aa15.08■□□□□ 0
VIPAS39-209ENST00000556909 PROKR2Q8NFJ6 384 aa15.08■□□□□ 0
VIPAS39-209ENST00000556909 ZNRF4Q8WWF5 429 aa15.08■□□□□ 0
VIPAS39-209ENST00000556909 PYURFQ96I23 114 aa15.08■□□□□ 0
VIPAS39-209ENST00000556909 DDOQ99489 341 aa15.08■□□□□ 0
VIPAS39-209ENST00000556909 COPS4Q9BT78 406 aa15.08■□□□□ 0
VIPAS39-209ENST00000556909 OPA3Q9H6K4 179 aa15.08■□□□□ 0
VIPAS39-209ENST00000556909 GORASP2Q9H8Y8 452 aa15.08■□□□□ 0
VIPAS39-209ENST00000556909 C14orf119Q9NWQ9 140 aa15.08■□□□□ 0
VIPAS39-209ENST00000556909 ADA2Q9NZK5 511 aa15.08■□□□□ 0
VIPAS39-209ENST00000556909 KAAG1Q9UBP8 84 aa15.08■□□□□ 0
VIPAS39-209ENST00000556909 KPTNQ9Y664 436 aa15.08■□□□□ 0
VIPAS39-209ENST00000556909 COMMD3-BMI1R4GMX3 469 aa15.08■□□□□ 0
VIPAS39-209ENST00000556909 TET2Q6N021 2002 aaPredicted RBP15.08■□□□□ 0
VIPAS39-209ENST00000556909 A0A1B0GW55 424 aa15.07■□□□□ 0
VIPAS39-209ENST00000556909 SLC22A31A6NKX4 558 aa15.07■□□□□ 0
VIPAS39-209ENST00000556909 GMNNO75496 209 aa15.07■□□□□ 0
VIPAS39-209ENST00000556909 DUX4L2P0CJ85 424 aa15.07■□□□□ 0
VIPAS39-209ENST00000556909 DUX4L3P0CJ86 424 aa15.07■□□□□ 0
VIPAS39-209ENST00000556909 DUX4L4P0CJ87 422 aa15.07■□□□□ 0
VIPAS39-209ENST00000556909 DUX4L5P0CJ88 424 aa15.07■□□□□ 0
VIPAS39-209ENST00000556909 DUX4L6P0CJ89 424 aa15.07■□□□□ 0
VIPAS39-209ENST00000556909 DUX4L7P0CJ90 424 aa15.07■□□□□ 0
VIPAS39-209ENST00000556909 IFNGR2P38484 337 aa15.07■□□□□ 0
VIPAS39-209ENST00000556909 MZT1Q08AG7 82 aa15.07■□□□□ 0
VIPAS39-209ENST00000556909 TSPAN31Q12999 210 aa15.07■□□□□ 0
VIPAS39-209ENST00000556909 PCK2Q16822 640 aa15.07■□□□□ 0
VIPAS39-209ENST00000556909 DUX4L9Q6RFH8 374 aaPredicted RBP15.07■□□□□ 0
VIPAS39-209ENST00000556909 GDPGP1Q6ZNW5 385 aa15.07■□□□□ 0
VIPAS39-209ENST00000556909 Q6ZSV7 163 aa15.07■□□□□ 0
VIPAS39-209ENST00000556909 DCXRQ7Z4W1 244 aa15.07■□□□□ 0
VIPAS39-209ENST00000556909 WDR86Q86TI4 376 aa15.07■□□□□ 0
VIPAS39-209ENST00000556909 ZDHHC21Q8IVQ6 265 aa15.07■□□□□ 0
VIPAS39-209ENST00000556909 OR4C15Q8NGM1 316 aa15.07■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms