RNA–Protein interactions for RNA: ENST00000556897.5

HNRNPC-227, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HNRNPC, Length 1,252 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-227ENST00000556897 RRM2BQ7LG56 351 aa7.4□□□□□ -1.22
HNRNPC-227ENST00000556897 ADCK1Q86TW2 530 aa7.4□□□□□ -1.22
HNRNPC-227ENST00000556897 PNKDQ8N490 385 aa7.4□□□□□ -1.22
HNRNPC-227ENST00000556897 LY6G5BQ8NDX9 201 aa7.4□□□□□ -1.22
HNRNPC-227ENST00000556897 OR2T12Q8NG77 320 aa7.4□□□□□ -1.22
HNRNPC-227ENST00000556897 OR5R1Q8NH85 324 aa7.4□□□□□ -1.22
HNRNPC-227ENST00000556897 NPRL2Q8WTW4 380 aa7.4□□□□□ -1.22
HNRNPC-227ENST00000556897 SGCDQ92629 289 aa7.4□□□□□ -1.22
HNRNPC-227ENST00000556897 PPP1R14AQ96A00 147 aa7.4□□□□□ -1.22
HNRNPC-227ENST00000556897 ITPKCQ96DU7 683 aa7.4□□□□□ -1.22
HNRNPC-227ENST00000556897 FAM46AQ96IP4 442 aaKnown RBP7.4□□□□□ -1.22
HNRNPC-227ENST00000556897 NECAP2Q9NVZ3 263 aa7.4□□□□□ -1.22
HNRNPC-227ENST00000556897 KAAG1Q9UBP8 84 aa7.4□□□□□ -1.22
HNRNPC-227ENST00000556897 AURKCQ9UQB9 309 aa7.4□□□□□ -1.22
HNRNPC-227ENST00000556897 SIGLEC7Q9Y286 467 aa7.4□□□□□ -1.22
HNRNPC-227ENST00000556897 NOP16Q9Y3C1 178 aaKnown RBP7.4□□□□□ -1.22
HNRNPC-227ENST00000556897 IER3IP1Q9Y5U9 82 aa7.4□□□□□ -1.22
HNRNPC-227ENST00000556897 IGLV1-36A0A0B4J1U3 117 aa7.39□□□□□ -1.23
HNRNPC-227ENST00000556897 MEIOCA2RUB1 952 aa7.39□□□□□ -1.23
HNRNPC-227ENST00000556897 GGT3PA6NGU5 568 aa7.39□□□□□ -1.23
HNRNPC-227ENST00000556897 FAM220BPB1ANY3 271 aa7.39□□□□□ -1.23
HNRNPC-227ENST00000556897 LHBP01229 141 aa7.39□□□□□ -1.23
HNRNPC-227ENST00000556897 ANOS1P23352 680 aa7.39□□□□□ -1.23
HNRNPC-227ENST00000556897 CRABP1P29762 137 aa7.39□□□□□ -1.23
HNRNPC-227ENST00000556897 SAA4P35542 130 aa7.39□□□□□ -1.23
HNRNPC-227ENST00000556897 EFNB2P52799 333 aa7.39□□□□□ -1.23
HNRNPC-227ENST00000556897 ZNF92Q03936 586 aa7.39□□□□□ -1.23
HNRNPC-227ENST00000556897 ECH1Q13011 328 aa7.39□□□□□ -1.23
HNRNPC-227ENST00000556897 KLRD1Q13241 179 aa7.39□□□□□ -1.23
HNRNPC-227ENST00000556897 SNAI3Q3KNW1 292 aa7.39□□□□□ -1.23
HNRNPC-227ENST00000556897 VAX1Q5SQQ9 334 aa7.39□□□□□ -1.23
HNRNPC-227ENST00000556897 TEX36Q5VZQ5 186 aa7.39□□□□□ -1.23
HNRNPC-227ENST00000556897 DNM1P34Q6PK57 102 aa7.39□□□□□ -1.23
HNRNPC-227ENST00000556897 TSEN54Q7Z6J9 526 aaKnown RBP7.39□□□□□ -1.23
HNRNPC-227ENST00000556897 CMTM4Q8IZR5 234 aa7.39□□□□□ -1.23
HNRNPC-227ENST00000556897 OR6V1Q8N148 313 aa7.39□□□□□ -1.23
HNRNPC-227ENST00000556897 LYG1Q8N1E2 194 aa7.39□□□□□ -1.23
HNRNPC-227ENST00000556897 LNX2Q8N448 690 aa7.39□□□□□ -1.23
HNRNPC-227ENST00000556897 KLHDC1Q8N7A1 406 aa7.39□□□□□ -1.23
HNRNPC-227ENST00000556897 FAM216BQ8N7L0 139 aa7.39□□□□□ -1.23
HNRNPC-227ENST00000556897 SLC26A10Q8NG04 563 aa7.39□□□□□ -1.23
HNRNPC-227ENST00000556897 OR2AJ1Q8NGZ0 328 aa7.39□□□□□ -1.23
HNRNPC-227ENST00000556897 OR2AE1Q8NHA4 323 aa7.39□□□□□ -1.23
HNRNPC-227ENST00000556897 DYDC1Q8WWB3 177 aa7.39□□□□□ -1.23
HNRNPC-227ENST00000556897 STON2Q8WXE9 905 aa7.39□□□□□ -1.23
HNRNPC-227ENST00000556897 CFHR4Q92496 578 aa7.39□□□□□ -1.23
HNRNPC-227ENST00000556897 GPX7Q96SL4 187 aaPredicted RBP7.39□□□□□ -1.23
HNRNPC-227ENST00000556897 CCL13Q99616 98 aa7.39□□□□□ -1.23
HNRNPC-227ENST00000556897 SRA1Q9HD15 236 aaKnown RBP7.39□□□□□ -1.23
HNRNPC-227ENST00000556897 PNRC2Q9NPJ4 139 aaKnown RBP7.39□□□□□ -1.23
HNRNPC-227ENST00000556897 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP7.39□□□□□ -1.238e-8■■■□□ 16.6
HNRNPC-227ENST00000556897 AURKAIP1Q9NWT8 199 aaPredicted RBP7.39□□□□□ -1.23
HNRNPC-227ENST00000556897 ADA2Q9NZK5 511 aa7.39□□□□□ -1.23
HNRNPC-227ENST00000556897 B9D1Q9UPM9 204 aa7.39□□□□□ -1.23
HNRNPC-227ENST00000556897 A0A0G2JND7 137 aa7.38□□□□□ -1.23
HNRNPC-227ENST00000556897 H3BUX3 64 aa7.38□□□□□ -1.23
HNRNPC-227ENST00000556897 M0R135 149 aa7.38□□□□□ -1.23
HNRNPC-227ENST00000556897 MRASO14807 208 aa7.38□□□□□ -1.23
HNRNPC-227ENST00000556897 ZNF682O95780 498 aa7.38□□□□□ -1.23
HNRNPC-227ENST00000556897 TXNDC12O95881 172 aa7.38□□□□□ -1.23
HNRNPC-227ENST00000556897 VSIG10L2P0DP72 767 aa7.38□□□□□ -1.23
HNRNPC-227ENST00000556897 KIR2DS4P43632 304 aa7.38□□□□□ -1.23
HNRNPC-227ENST00000556897 RPS6KA3P51812 740 aa7.38□□□□□ -1.23
HNRNPC-227ENST00000556897 TPTEP56180 551 aa7.38□□□□□ -1.23
HNRNPC-227ENST00000556897 FXYD6P3P58550 94 aa7.38□□□□□ -1.23
HNRNPC-227ENST00000556897 IKZF1Q13422 519 aa7.38□□□□□ -1.23
HNRNPC-227ENST00000556897 PCK2Q16822 640 aa7.38□□□□□ -1.23
HNRNPC-227ENST00000556897 MICBQ29980 383 aa7.38□□□□□ -1.23
HNRNPC-227ENST00000556897 WDR38Q5JTN6 314 aa7.38□□□□□ -1.23
HNRNPC-227ENST00000556897 C11orf88Q6PI97 169 aa7.38□□□□□ -1.23
HNRNPC-227ENST00000556897 DPY19L2P2Q6ZN68 376 aa7.38□□□□□ -1.23
HNRNPC-227ENST00000556897 Q8N7P7 452 aa7.38□□□□□ -1.23
HNRNPC-227ENST00000556897 SPERTQ8NA61 448 aa7.38□□□□□ -1.23
HNRNPC-227ENST00000556897 OR4C13Q8NGP0 309 aa7.38□□□□□ -1.23
HNRNPC-227ENST00000556897 OR2T6Q8NHC8 308 aa7.38□□□□□ -1.23
HNRNPC-227ENST00000556897 SLC7A13Q8TCU3 470 aa7.38□□□□□ -1.23
HNRNPC-227ENST00000556897 LRRC29Q8WV35 223 aa7.38□□□□□ -1.23
HNRNPC-227ENST00000556897 C17orf50Q8WW18 174 aa7.38□□□□□ -1.23
HNRNPC-227ENST00000556897 TNFRSF14Q92956 283 aa7.38□□□□□ -1.23
HNRNPC-227ENST00000556897 SEH1LQ96EE3 360 aa7.38□□□□□ -1.23
HNRNPC-227ENST00000556897 ZNF799Q96GE5 643 aa7.38□□□□□ -1.23
HNRNPC-227ENST00000556897 RSRC1Q96IZ7 334 aaKnown RBP7.38□□□□□ -1.23
HNRNPC-227ENST00000556897 MAP6Q96JE9 813 aa7.38□□□□□ -1.23
HNRNPC-227ENST00000556897 NMNAT3Q96T66 252 aa7.38□□□□□ -1.23
HNRNPC-227ENST00000556897 MRPL15Q9P015 296 aaKnown RBP7.38□□□□□ -1.23
HNRNPC-227ENST00000556897 GMPR2Q9P2T1 348 aaKnown RBP7.38□□□□□ -1.23
HNRNPC-227ENST00000556897 CYB5R1Q9UHQ9 305 aa7.38□□□□□ -1.23
HNRNPC-227ENST00000556897 TMEM5Q9Y2B1 443 aa7.38□□□□□ -1.23
HNRNPC-227ENST00000556897 MAB21L2Q9Y586 359 aa7.38□□□□□ -1.23
HNRNPC-227ENST00000556897 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP7.37□□□□□ -1.23
HNRNPC-227ENST00000556897 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP7.37□□□□□ -1.23
HNRNPC-227ENST00000556897 BHLHE40O14503 412 aa7.37□□□□□ -1.23
HNRNPC-227ENST00000556897 ACOT8O14734 319 aa7.37□□□□□ -1.23
HNRNPC-227ENST00000556897 NDUFB3O43676 98 aa7.37□□□□□ -1.23
HNRNPC-227ENST00000556897 XPNPEP2O43895 674 aa7.37□□□□□ -1.23
HNRNPC-227ENST00000556897 NPPAP01160 153 aa7.37□□□□□ -1.23
HNRNPC-227ENST00000556897 HLA-DQA2P01906 255 aa7.37□□□□□ -1.23
HNRNPC-227ENST00000556897 VSIG8P0DPA2 414 aa7.37□□□□□ -1.23
HNRNPC-227ENST00000556897 MUC1P15941 1255 aaPredicted RBP7.37□□□□□ -1.23
HNRNPC-227ENST00000556897 OMPP47874 163 aa7.37□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms