RNA–Protein interactions for RNA: ENST00000556498.1

TDP1-215, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 3

Gene TDP1, Length 597 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-215ENST00000556498 VPREB3Q9UKI3 123 aa5.51□□□□□ -1.53
TDP1-215ENST00000556498 OAZ3Q9UMX2 235 aa5.51□□□□□ -1.53
TDP1-215ENST00000556498 GPR132Q9UNW8 380 aa5.51□□□□□ -1.53
TDP1-215ENST00000556498 CSDC2Q9Y534 153 aaKnown RBP5.51□□□□□ -1.53
TDP1-215ENST00000556498 PTPRJQ12913 1337 aa5.5□□□□□ -1.53
TDP1-215ENST00000556498 AKAP11Q9UKA4 1901 aa5.5□□□□□ -1.53
TDP1-215ENST00000556498 DENND4AQ7Z401 1863 aa5.5□□□□□ -1.53
TDP1-215ENST00000556498 TNFSF12-TNFSF13A0A0A6YY99 330 aa5.5□□□□□ -1.53
TDP1-215ENST00000556498 BORCS7-ASMTA0A0B4J1R7 106 aa5.5□□□□□ -1.53
TDP1-215ENST00000556498 TRAV38-1A0A0B4J264 116 aa5.5□□□□□ -1.53
TDP1-215ENST00000556498 SMIM9A6NGZ8 99 aa5.5□□□□□ -1.53
TDP1-215ENST00000556498 P2RX6O15547 441 aa5.5□□□□□ -1.53
TDP1-215ENST00000556498 PAX4O43316 350 aa5.5□□□□□ -1.53
TDP1-215ENST00000556498 FGF16O43320 207 aa5.5□□□□□ -1.53
TDP1-215ENST00000556498 GALR3O60755 368 aaPredicted RBP5.5□□□□□ -1.53
TDP1-215ENST00000556498 RAMP2O60895 175 aa5.5□□□□□ -1.53
TDP1-215ENST00000556498 OR2A4O95047 310 aa5.5□□□□□ -1.53
TDP1-215ENST00000556498 CSN2P05814 226 aa5.5□□□□□ -1.53
TDP1-215ENST00000556498 ADH4P08319 380 aa5.5□□□□□ -1.53
TDP1-215ENST00000556498 EBLN1P0CF75 366 aa5.5□□□□□ -1.53
TDP1-215ENST00000556498 HIST1H1CP16403 213 aaKnown RBP5.5□□□□□ -1.53
TDP1-215ENST00000556498 NPPBP16860 134 aa5.5□□□□□ -1.53
TDP1-215ENST00000556498 TPSB2P20231 275 aa5.5□□□□□ -1.53
TDP1-215ENST00000556498 HTR1FP30939 366 aa5.5□□□□□ -1.53
TDP1-215ENST00000556498 SNCAP37840 140 aa5.5□□□□□ -1.53
TDP1-215ENST00000556498 OR3A4PP47883 348 aa5.5□□□□□ -1.53
TDP1-215ENST00000556498 HTR6P50406 440 aa5.5□□□□□ -1.53
TDP1-215ENST00000556498 ASCL1P50553 236 aa5.5□□□□□ -1.53
TDP1-215ENST00000556498 ISL1P61371 349 aa5.5□□□□□ -1.53
TDP1-215ENST00000556498 RPL24P83731 157 aaKnown RBP5.5□□□□□ -1.53
TDP1-215ENST00000556498 H3F3AP84243 136 aa5.5□□□□□ -1.53
TDP1-215ENST00000556498 ID2Q02363 134 aa5.5□□□□□ -1.53
TDP1-215ENST00000556498 PJVKQ0ZLH3 352 aa5.5□□□□□ -1.53
TDP1-215ENST00000556498 ZP4Q12836 540 aa5.5□□□□□ -1.53
TDP1-215ENST00000556498 PRDX4Q13162 271 aa5.5□□□□□ -1.53
TDP1-215ENST00000556498 TPSAB1Q15661 275 aa5.5□□□□□ -1.53
TDP1-215ENST00000556498 ODF4Q2M2E3 257 aa5.5□□□□□ -1.53
TDP1-215ENST00000556498 TTLL9Q3SXZ7 439 aa5.5□□□□□ -1.53
TDP1-215ENST00000556498 AWAT1Q58HT5 328 aa5.5□□□□□ -1.53
TDP1-215ENST00000556498 LRRC73Q5JTD7 316 aa5.5□□□□□ -1.53
TDP1-215ENST00000556498 TIMM23BQ5SRD1 257 aa5.5□□□□□ -1.53
TDP1-215ENST00000556498 HECTD2Q5U5R9 776 aa5.5□□□□□ -1.53
TDP1-215ENST00000556498 C1QL3Q5VWW1 255 aa5.5□□□□□ -1.53
TDP1-215ENST00000556498 LCN8Q6JVE9 175 aa5.5□□□□□ -1.53
TDP1-215ENST00000556498 FAAP20Q6NZ36 180 aa5.5□□□□□ -1.53
TDP1-215ENST00000556498 ABHD15Q6UXT9 468 aa5.5□□□□□ -1.53
TDP1-215ENST00000556498 GTF2H5Q6ZYL4 71 aa5.5□□□□□ -1.53
TDP1-215ENST00000556498 PARS2Q7L3T8 475 aaKnown RBP5.5□□□□□ -1.53
TDP1-215ENST00000556498 LRRTM1Q86UE6 522 aa5.5□□□□□ -1.53
TDP1-215ENST00000556498 LGI4Q8N135 537 aa5.5□□□□□ -1.53
TDP1-215ENST00000556498 PNKDQ8N490 385 aa5.5□□□□□ -1.53
TDP1-215ENST00000556498 DCBLD1Q8N8Z6 715 aa5.5□□□□□ -1.53
TDP1-215ENST00000556498 ZNF439Q8NDP4 499 aa5.5□□□□□ -1.53
TDP1-215ENST00000556498 OR5B3Q8NH48 314 aa5.5□□□□□ -1.53
TDP1-215ENST00000556498 OR5K2Q8NHB8 316 aa5.5□□□□□ -1.53
TDP1-215ENST00000556498 VN1R17PQ8TDU5 208 aa5.5□□□□□ -1.53
TDP1-215ENST00000556498 ST8SIA1Q92185 356 aa5.5□□□□□ -1.53
TDP1-215ENST00000556498 TMEM18Q96B42 140 aa5.5□□□□□ -1.53
TDP1-215ENST00000556498 RAB39BQ96DA2 213 aa5.5□□□□□ -1.53
TDP1-215ENST00000556498 TMEM176AQ96HP8 235 aa5.5□□□□□ -1.53
TDP1-215ENST00000556498 BTF3L4Q96K17 158 aa5.5□□□□□ -1.53
TDP1-215ENST00000556498 OR2A7Q96R45 310 aa5.5□□□□□ -1.53
TDP1-215ENST00000556498 FCRL5Q96RD9 977 aa5.5□□□□□ -1.53
TDP1-215ENST00000556498 SEPHS2Q99611 448 aa5.5□□□□□ -1.53
TDP1-215ENST00000556498 LMF2Q9BU23 707 aaKnown RBP5.5□□□□□ -1.53
TDP1-215ENST00000556498 SELENOIQ9C0D9 397 aa5.5□□□□□ -1.53
TDP1-215ENST00000556498 SLC25A31Q9H0C2 315 aa5.5□□□□□ -1.53
TDP1-215ENST00000556498 ARL6Q9H0F7 186 aa5.5□□□□□ -1.53
TDP1-215ENST00000556498 OR52D1Q9H346 318 aa5.5□□□□□ -1.53
TDP1-215ENST00000556498 RBKSQ9H477 322 aa5.5□□□□□ -1.53
TDP1-215ENST00000556498 PLK3Q9H4B4 646 aa5.5□□□□□ -1.53
TDP1-215ENST00000556498 PRDM12Q9H4Q4 367 aa5.5□□□□□ -1.53
TDP1-215ENST00000556498 SRD5A3Q9H8P0 318 aa5.5□□□□□ -1.53
TDP1-215ENST00000556498 Q9N2K0 584 aa5.5□□□□□ -1.53
TDP1-215ENST00000556498 EXOSC4Q9NPD3 245 aaKnown RBP5.5□□□□□ -1.53
TDP1-215ENST00000556498 RPS10P5Q9NQ39 176 aa5.5□□□□□ -1.53
TDP1-215ENST00000556498 WSB2Q9NYS7 404 aaPredicted RBP5.5□□□□□ -1.53
TDP1-215ENST00000556498 CLN8Q9UBY8 286 aa5.5□□□□□ -1.53
TDP1-215ENST00000556498 SS18L2Q9UHA2 77 aa5.5□□□□□ -1.53
TDP1-215ENST00000556498 FOXJ3Q9UPW0 622 aa5.5□□□□□ -1.53
TDP1-215ENST00000556498 MYOM1P52179 1685 aa5.5□□□□□ -1.53
TDP1-215ENST00000556498 NALCNQ8IZF0 1738 aa5.49□□□□□ -1.53
TDP1-215ENST00000556498 MYH8P13535 1937 aa5.49□□□□□ -1.53
TDP1-215ENST00000556498 C11orf97A0A1B0GVM6 126 aaPredicted RBP5.49□□□□□ -1.53
TDP1-215ENST00000556498 C21orf140B9A014 251 aa5.49□□□□□ -1.53
TDP1-215ENST00000556498 E5RGE8 158 aa5.49□□□□□ -1.53
TDP1-215ENST00000556498 ERI3O43414 337 aaKnown RBP5.49□□□□□ -1.53
TDP1-215ENST00000556498 SPRY1O43609 319 aaPredicted RBP5.49□□□□□ -1.53
TDP1-215ENST00000556498 TIMM8AO60220 97 aaPredicted RBP5.49□□□□□ -1.53
TDP1-215ENST00000556498 PRSS23O95084 383 aa5.49□□□□□ -1.53
TDP1-215ENST00000556498 FARS2O95363 451 aaKnown RBP5.49□□□□□ -1.53
TDP1-215ENST00000556498 CST1P01037 141 aa5.49□□□□□ -1.53
TDP1-215ENST00000556498 DBIP07108 87 aaKnown RBP5.49□□□□□ -1.53
TDP1-215ENST00000556498 CD14P08571 375 aa5.49□□□□□ -1.53
TDP1-215ENST00000556498 RAB40ALP0C0E4 278 aa5.49□□□□□ -1.53
TDP1-215ENST00000556498 C8orf88P0DMB2 117 aa5.49□□□□□ -1.53
TDP1-215ENST00000556498 CT45A8P0DMV1 189 aa5.49□□□□□ -1.53
TDP1-215ENST00000556498 CT45A9P0DMV2 189 aa5.49□□□□□ -1.53
TDP1-215ENST00000556498 HIST1H1EP10412 219 aaKnown RBP5.49□□□□□ -1.53
TDP1-215ENST00000556498 FCGR2AP12318 317 aa5.49□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms