RNA–Protein interactions for RNA: ENST00000556374.5

ATXN3-241, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,083 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-241ENST00000556374 JTBO76095 146 aa3.91□□□□□ -1.78
ATXN3-241ENST00000556374 UBR5O95071 2799 aaPredicted RBP3.91□□□□□ -1.78
ATXN3-241ENST00000556374 MPC2O95563 127 aa3.91□□□□□ -1.78
ATXN3-241ENST00000556374 PMS2P2O95744 297 aa3.91□□□□□ -1.78
ATXN3-241ENST00000556374 WDPCPO95876 746 aa3.91□□□□□ -1.78
ATXN3-241ENST00000556374 IFNA6P05013 189 aa3.91□□□□□ -1.78
ATXN3-241ENST00000556374 ERCC1P07992 297 aaPredicted RBP3.91□□□□□ -1.78
ATXN3-241ENST00000556374 ANKRD34CP0C6C1 535 aa3.91□□□□□ -1.78
ATXN3-241ENST00000556374 PET100P0DJ07 73 aa3.91□□□□□ -1.78
ATXN3-241ENST00000556374 THEGLP0DJG4 465 aa3.91□□□□□ -1.78
ATXN3-241ENST00000556374 RPA2P15927 270 aa3.91□□□□□ -1.78
ATXN3-241ENST00000556374 NAGAP17050 411 aa3.91□□□□□ -1.78
ATXN3-241ENST00000556374 MAOAP21397 527 aa3.91□□□□□ -1.78
ATXN3-241ENST00000556374 ACHEP22303 614 aa3.91□□□□□ -1.78
ATXN3-241ENST00000556374 TACR3P29371 465 aa3.91□□□□□ -1.78
ATXN3-241ENST00000556374 DLSTP36957 453 aa3.91□□□□□ -1.78
ATXN3-241ENST00000556374 CDKN2AP42771 156 aaKnown RBP3.91□□□□□ -1.78
ATXN3-241ENST00000556374 PPICP45877 212 aa3.91□□□□□ -1.78
ATXN3-241ENST00000556374 CAPZBP47756 277 aa3.91□□□□□ -1.78
ATXN3-241ENST00000556374 POU3F4P49335 361 aa3.91□□□□□ -1.78
ATXN3-241ENST00000556374 DAP3P51398 398 aaKnown RBP3.91□□□□□ -1.78
ATXN3-241ENST00000556374 CCR5P51681 352 aa3.91□□□□□ -1.78
ATXN3-241ENST00000556374 RIPPLY3P57055 190 aa3.91□□□□□ -1.78
ATXN3-241ENST00000556374 TAS2R31P59538 309 aa3.91□□□□□ -1.78
ATXN3-241ENST00000556374 RPL27P61353 136 aaKnown RBP3.91□□□□□ -1.78
ATXN3-241ENST00000556374 LCN6P62502 163 aa3.91□□□□□ -1.78
ATXN3-241ENST00000556374 IGLV3-21P80748 117 aaPredicted RBP3.91□□□□□ -1.78
ATXN3-241ENST00000556374 GLO1Q04760 184 aa3.91□□□□□ -1.78
ATXN3-241ENST00000556374 RPL18Q07020 188 aaKnown RBP3.91□□□□□ -1.78
ATXN3-241ENST00000556374 PLCXD2Q0VAA5 305 aa3.91□□□□□ -1.78
ATXN3-241ENST00000556374 SKP2Q13309 424 aa3.91□□□□□ -1.78
ATXN3-241ENST00000556374 EIF2B1Q14232 305 aaKnown RBP3.91□□□□□ -1.78
ATXN3-241ENST00000556374 MFSD13AQ14CX5 517 aa3.91□□□□□ -1.78
ATXN3-241ENST00000556374 ELOCQ15369 112 aa3.91□□□□□ -1.78
ATXN3-241ENST00000556374 ODF4Q2M2E3 257 aa3.91□□□□□ -1.78
ATXN3-241ENST00000556374 PRTGQ2VWP7 1150 aa3.91□□□□□ -1.78
ATXN3-241ENST00000556374 CD300EQ496F6 205 aaPredicted RBP3.91□□□□□ -1.78
ATXN3-241ENST00000556374 SCGB2B2Q4G0G5 96 aa3.91□□□□□ -1.78
ATXN3-241ENST00000556374 KLHL26Q53HC5 615 aa3.91□□□□□ -1.78
ATXN3-241ENST00000556374 ACTBL2Q562R1 376 aa3.91□□□□□ -1.78
ATXN3-241ENST00000556374 MESTQ5EB52 335 aa3.91□□□□□ -1.78
ATXN3-241ENST00000556374 RNASE10Q5GAN6 216 aaKnown RBP3.91□□□□□ -1.78
ATXN3-241ENST00000556374 WDR38Q5JTN6 314 aa3.91□□□□□ -1.78
ATXN3-241ENST00000556374 CLVS2Q5SYC1 327 aa3.91□□□□□ -1.78
ATXN3-241ENST00000556374 EEF1A1P5Q5VTE0 462 aa3.91□□□□□ -1.78
ATXN3-241ENST00000556374 RAB12Q6IQ22 244 aa3.91□□□□□ -1.78
ATXN3-241ENST00000556374 C11orf87Q6NUJ2 197 aa3.91□□□□□ -1.78
ATXN3-241ENST00000556374 FAAP20Q6NZ36 180 aa3.91□□□□□ -1.78
ATXN3-241ENST00000556374 FAM122CQ6P4D5 195 aa3.91□□□□□ -1.78
ATXN3-241ENST00000556374 TMEM65Q6PI78 240 aa3.91□□□□□ -1.78
ATXN3-241ENST00000556374 ALKAL2Q6UX46 152 aa3.91□□□□□ -1.78
ATXN3-241ENST00000556374 LHFPL2Q6ZUX7 228 aa3.91□□□□□ -1.78
ATXN3-241ENST00000556374 NDUFAF7Q7L592 441 aa3.91□□□□□ -1.78
ATXN3-241ENST00000556374 FAM122BQ7Z309 247 aa3.91□□□□□ -1.78
ATXN3-241ENST00000556374 HSD17B13Q7Z5P4 300 aaPredicted RBP3.91□□□□□ -1.78
ATXN3-241ENST00000556374 PIP4P1Q86T03 277 aa3.91□□□□□ -1.78
ATXN3-241ENST00000556374 LRRTM1Q86UE6 522 aa3.91□□□□□ -1.78
ATXN3-241ENST00000556374 GPAT4Q86UL3 456 aa3.91□□□□□ -1.78
ATXN3-241ENST00000556374 HIST2H2ABQ8IUE6 130 aaPredicted RBP3.91□□□□□ -1.78
ATXN3-241ENST00000556374 MISPQ8IVT2 679 aa3.91□□□□□ -1.78
ATXN3-241ENST00000556374 PM20D2Q8IYS1 436 aa3.91□□□□□ -1.78
ATXN3-241ENST00000556374 ZNF679Q8IYX0 411 aa3.91□□□□□ -1.78
ATXN3-241ENST00000556374 GABRG1Q8N1C3 465 aa3.91□□□□□ -1.78
ATXN3-241ENST00000556374 BEST3Q8N1M1 668 aa3.91□□□□□ -1.78
ATXN3-241ENST00000556374 C12orf45Q8N5I9 185 aaPredicted RBP3.91□□□□□ -1.78
ATXN3-241ENST00000556374 JAGN1Q8N5M9 183 aa3.91□□□□□ -1.78
ATXN3-241ENST00000556374 METTL27Q8N6F8 245 aaPredicted RBP3.91□□□□□ -1.78
ATXN3-241ENST00000556374 TMEM229BQ8NBD8 167 aa3.91□□□□□ -1.78
ATXN3-241ENST00000556374 INO80EQ8NBZ0 244 aaPredicted RBP3.91□□□□□ -1.78
ATXN3-241ENST00000556374 PXT1Q8NFP0 134 aa3.91□□□□□ -1.78
ATXN3-241ENST00000556374 STEAP2Q8NFT2 490 aa3.91□□□□□ -1.78
ATXN3-241ENST00000556374 OR4N2Q8NGD1 307 aa3.91□□□□□ -1.78
ATXN3-241ENST00000556374 OR51D1Q8NGF3 324 aa3.91□□□□□ -1.78
ATXN3-241ENST00000556374 OR5M1Q8NGP8 315 aa3.91□□□□□ -1.78
ATXN3-241ENST00000556374 OR8S1Q8NH09 359 aa3.91□□□□□ -1.78
ATXN3-241ENST00000556374 OR52N5Q8NH56 324 aa3.91□□□□□ -1.78
ATXN3-241ENST00000556374 C16orf52Q8NHV5 167 aa3.91□□□□□ -1.78
ATXN3-241ENST00000556374 THAP6Q8TBB0 222 aa3.91□□□□□ -1.78
ATXN3-241ENST00000556374 LIPHQ8WWY8 451 aa3.91□□□□□ -1.78
ATXN3-241ENST00000556374 TMEM234Q8WY98 164 aa3.91□□□□□ -1.78
ATXN3-241ENST00000556374 RGP1Q92546 391 aaPredicted RBP3.91□□□□□ -1.78
ATXN3-241ENST00000556374 DAZLQ92904 295 aaKnown RBP3.91□□□□□ -1.78
ATXN3-241ENST00000556374 FAM46BQ96A09 425 aa3.91□□□□□ -1.78
ATXN3-241ENST00000556374 PNPLA2Q96AD5 504 aa3.91□□□□□ -1.78
ATXN3-241ENST00000556374 FAM3DQ96BQ1 224 aa3.91□□□□□ -1.78
ATXN3-241ENST00000556374 ARSGQ96EG1 525 aa3.91□□□□□ -1.78
ATXN3-241ENST00000556374 NARS2Q96I59 477 aaKnown RBP3.91□□□□□ -1.78
ATXN3-241ENST00000556374 MRGPRX1Q96LB2 322 aa3.91□□□□□ -1.78
ATXN3-241ENST00000556374 BMFQ96LC9 184 aa3.91□□□□□ -1.78
ATXN3-241ENST00000556374 C5orf34Q96MH7 638 aa3.91□□□□□ -1.78
ATXN3-241ENST00000556374 TSPAN32Q96QS1 320 aa3.91□□□□□ -1.78
ATXN3-241ENST00000556374 OR1F2PQ96R84 312 aa3.91□□□□□ -1.78
ATXN3-241ENST00000556374 LPAR4Q99677 370 aa3.91□□□□□ -1.78
ATXN3-241ENST00000556374 CMKLR1Q99788 373 aa3.91□□□□□ -1.78
ATXN3-241ENST00000556374 PRRT1Q99946 306 aa3.91□□□□□ -1.78
ATXN3-241ENST00000556374 PLA2G2FQ9BZM2 168 aa3.91□□□□□ -1.78
ATXN3-241ENST00000556374 OR8D2Q9GZM6 311 aa3.91□□□□□ -1.78
ATXN3-241ENST00000556374 LAT2Q9GZY6 243 aa3.91□□□□□ -1.78
ATXN3-241ENST00000556374 SYT4Q9H2B2 425 aa3.91□□□□□ -1.78
ATXN3-241ENST00000556374 C8orf33Q9H7E9 229 aaPredicted RBP3.91□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms