RNA–Protein interactions for RNA: ENST00000556303.1

SNX6-207, Transcript of sorting nexin 6, humanhuman

TSL 2

Gene SNX6, Length 539 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-207ENST00000556303 NRBF2Q96F24 287 aa10.56□□□□□ -0.72
SNX6-207ENST00000556303 NEIL1Q96FI4 390 aaPredicted RBP10.56□□□□□ -0.72
SNX6-207ENST00000556303 OR8B2Q96RD0 313 aa10.56□□□□□ -0.72
SNX6-207ENST00000556303 INTS14Q96SY0 518 aa10.56□□□□□ -0.72
SNX6-207ENST00000556303 TMEM246Q9BRR3 403 aa10.56□□□□□ -0.72
SNX6-207ENST00000556303 TEX12Q9BXU0 123 aa10.56□□□□□ -0.72
SNX6-207ENST00000556303 ZNF556Q9HAH1 456 aa10.56□□□□□ -0.72
SNX6-207ENST00000556303 MMP26Q9NRE1 261 aa10.56□□□□□ -0.72
SNX6-207ENST00000556303 CENPMQ9NSP4 180 aa10.56□□□□□ -0.72
SNX6-207ENST00000556303 NUP50Q9UKX7 468 aa10.56□□□□□ -0.72
SNX6-207ENST00000556303 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP10.55□□□□□ -0.72
SNX6-207ENST00000556303 PHYHO14832 338 aa10.55□□□□□ -0.72
SNX6-207ENST00000556303 GYPBP06028 91 aa10.55□□□□□ -0.72
SNX6-207ENST00000556303 OSMP13725 252 aa10.55□□□□□ -0.72
SNX6-207ENST00000556303 HSD11B1P28845 292 aa10.55□□□□□ -0.72
SNX6-207ENST00000556303 GSTT1P30711 240 aa10.55□□□□□ -0.72
SNX6-207ENST00000556303 PAX2Q02962 417 aa10.55□□□□□ -0.72
SNX6-207ENST00000556303 ARMCX4Q5H9R4 360 aa10.55□□□□□ -0.72
SNX6-207ENST00000556303 GLYATL3Q5SZD4 288 aa10.55□□□□□ -0.72
SNX6-207ENST00000556303 ZNF454Q8N9F8 522 aa10.55□□□□□ -0.72
SNX6-207ENST00000556303 PAPD5Q8NDF8 572 aaKnown RBP10.55□□□□□ -0.72
SNX6-207ENST00000556303 BCAS4Q8TDM0 211 aa10.55□□□□□ -0.72
SNX6-207ENST00000556303 RNF133Q8WVZ7 376 aa10.55□□□□□ -0.72
SNX6-207ENST00000556303 RAB40AQ8WXH6 277 aa10.55□□□□□ -0.72
SNX6-207ENST00000556303 CLPTM1LQ96KA5 538 aa10.55□□□□□ -0.72
SNX6-207ENST00000556303 ADAT1Q9BUB4 502 aaKnown RBP10.55□□□□□ -0.72
SNX6-207ENST00000556303 RGCCQ9H4X1 137 aa10.55□□□□□ -0.72
SNX6-207ENST00000556303 ZMAT3Q9HA38 289 aaKnown RBP10.55□□□□□ -0.72
SNX6-207ENST00000556303 C14orf119Q9NWQ9 140 aa10.55□□□□□ -0.72
SNX6-207ENST00000556303 FAM53CQ9NYF3 392 aa10.55□□□□□ -0.72
SNX6-207ENST00000556303 PDP1Q9P0J1 537 aaPredicted RBP10.55□□□□□ -0.72
SNX6-207ENST00000556303 RNF7Q9UBF6 113 aa10.55□□□□□ -0.72
SNX6-207ENST00000556303 IGHV2-70DA0A0C4DH43 119 aa10.54□□□□□ -0.72
SNX6-207ENST00000556303 KIR2DS1A0A191URI9 304 aa10.54□□□□□ -0.72
SNX6-207ENST00000556303 TMEM89A2RUT3 159 aa10.54□□□□□ -0.72
SNX6-207ENST00000556303 ANKRD30BLA7E2S9 258 aa10.54□□□□□ -0.72
SNX6-207ENST00000556303 PRR23D1E9PI22 279 aaPredicted RBP10.54□□□□□ -0.72
SNX6-207ENST00000556303 PRODHO43272 600 aa10.54□□□□□ -0.72
SNX6-207ENST00000556303 PRR23D2P0DMB1 279 aaPredicted RBP10.54□□□□□ -0.72
SNX6-207ENST00000556303 CLUP10909 449 aa10.54□□□□□ -0.72
SNX6-207ENST00000556303 PSKH1P11801 424 aa10.54□□□□□ -0.72
SNX6-207ENST00000556303 CA6P23280 308 aa10.54□□□□□ -0.72
SNX6-207ENST00000556303 PSMB10P40306 273 aa10.54□□□□□ -0.72
SNX6-207ENST00000556303 PRKXP51817 358 aa10.54□□□□□ -0.72
SNX6-207ENST00000556303 BPIFB3P59826 476 aa10.54□□□□□ -0.72
SNX6-207ENST00000556303 SEC61A1P61619 476 aaKnown RBP10.54□□□□□ -0.72
SNX6-207ENST00000556303 CDK5Q00535 292 aa10.54□□□□□ -0.72
SNX6-207ENST00000556303 EIF2B1Q14232 305 aaKnown RBP10.54□□□□□ -0.72
SNX6-207ENST00000556303 FLOT2Q14254 428 aa10.54□□□□□ -0.72
SNX6-207ENST00000556303 SLC35D3Q5M8T2 416 aa10.54□□□□□ -0.72
SNX6-207ENST00000556303 CD276Q5ZPR3 534 aa10.54□□□□□ -0.72
SNX6-207ENST00000556303 LYPD4Q6UWN0 246 aa10.54□□□□□ -0.72
SNX6-207ENST00000556303 C12orf54Q6X4T0 127 aa10.54□□□□□ -0.72
SNX6-207ENST00000556303 RBMS3Q6XE24 437 aaKnown RBP10.54□□□□□ -0.72
SNX6-207ENST00000556303 C9orf139Q6ZV77 190 aa10.54□□□□□ -0.72
SNX6-207ENST00000556303 ZNF771Q7L3S4 317 aaPredicted RBP10.54□□□□□ -0.72
SNX6-207ENST00000556303 DPY19L4Q7Z388 723 aa10.54□□□□□ -0.72
SNX6-207ENST00000556303 ERI1Q8IV48 349 aaKnown RBP10.54□□□□□ -0.72
SNX6-207ENST00000556303 TIGD4Q8IY51 512 aa10.54□□□□□ -0.72
SNX6-207ENST00000556303 FTMTQ8N4E7 242 aa10.54□□□□□ -0.72
SNX6-207ENST00000556303 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP10.54□□□□□ -0.72
SNX6-207ENST00000556303 OR2AE1Q8NHA4 323 aa10.54□□□□□ -0.72
SNX6-207ENST00000556303 DACT3Q96B18 629 aaPredicted RBP10.54□□□□□ -0.72
SNX6-207ENST00000556303 ABHD6Q9BV23 337 aa10.54□□□□□ -0.72
SNX6-207ENST00000556303 NIPAL2Q9H841 368 aa10.54□□□□□ -0.72
SNX6-207ENST00000556303 ABCB9Q9NP78 766 aa10.54□□□□□ -0.72
SNX6-207ENST00000556303 DNAJB9Q9UBS3 223 aa10.54□□□□□ -0.72
SNX6-207ENST00000556303 CLN8Q9UBY8 286 aa10.54□□□□□ -0.72
SNX6-207ENST00000556303 ZNF391Q9UJN7 358 aa10.54□□□□□ -0.72
SNX6-207ENST00000556303 TRAV38-1A0A0B4J264 116 aa10.53□□□□□ -0.72
SNX6-207ENST00000556303 TCRBV3S1A0A5B6 114 aa10.53□□□□□ -0.72
SNX6-207ENST00000556303 LGALS8O00214 317 aa10.53□□□□□ -0.72
SNX6-207ENST00000556303 FAM20BO75063 409 aa10.53□□□□□ -0.72
SNX6-207ENST00000556303 E2F6O75461 281 aa10.53□□□□□ -0.72
SNX6-207ENST00000556303 TIPRLO75663 272 aa10.53□□□□□ -0.72
SNX6-207ENST00000556303 LIPFP07098 398 aa10.53□□□□□ -0.72
SNX6-207ENST00000556303 CD80P33681 288 aa10.53□□□□□ -0.72
SNX6-207ENST00000556303 OPRL1P41146 370 aa10.53□□□□□ -0.72
SNX6-207ENST00000556303 PITPNBP48739 271 aa10.53□□□□□ -0.72
SNX6-207ENST00000556303 CX3CR1P49238 355 aa10.53□□□□□ -0.72
SNX6-207ENST00000556303 FAM3AP98173 230 aa10.53□□□□□ -0.72
SNX6-207ENST00000556303 GINS1Q14691 196 aa10.53□□□□□ -0.72
SNX6-207ENST00000556303 MPPED2Q15777 294 aa10.53□□□□□ -0.72
SNX6-207ENST00000556303 TIGD6Q17RP2 521 aa10.53□□□□□ -0.72
SNX6-207ENST00000556303 WDR25Q64LD2 544 aaPredicted RBP10.53□□□□□ -0.72
SNX6-207ENST00000556303 DOK3Q7L591 496 aa10.53□□□□□ -0.72
SNX6-207ENST00000556303 SLC16A9Q7RTY1 509 aa10.53□□□□□ -0.72
SNX6-207ENST00000556303 PRSS45Q7RTY3 260 aa10.53□□□□□ -0.72
SNX6-207ENST00000556303 CSNK2A3Q8NEV1 391 aa10.53□□□□□ -0.72
SNX6-207ENST00000556303 OR56B2PQ8NGI1 322 aa10.53□□□□□ -0.72
SNX6-207ENST00000556303 OR6N2Q8NGY6 317 aa10.53□□□□□ -0.72
SNX6-207ENST00000556303 OTOSQ8NHW6 89 aa10.53□□□□□ -0.72
SNX6-207ENST00000556303 GCDHQ92947 438 aaPredicted RBP10.53□□□□□ -0.72
SNX6-207ENST00000556303 UPRTQ96BW1 309 aa10.53□□□□□ -0.72
SNX6-207ENST00000556303 SLC6A7Q99884 636 aa10.53□□□□□ -0.72
SNX6-207ENST00000556303 OR10A2Q9H208 303 aa10.53□□□□□ -0.72
SNX6-207ENST00000556303 RNPEPL1Q9HAU8 725 aa10.53□□□□□ -0.72
SNX6-207ENST00000556303 ERVK-18Q9QC07 812 aa10.53□□□□□ -0.72
SNX6-207ENST00000556303 FAM183AA6NL82 134 aa10.52□□□□□ -0.73
SNX6-207ENST00000556303 FKBP6O75344 327 aa10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 72.7 ms