RNA–Protein interactions for RNA: ENST00000556063.1

TDP1-214, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene TDP1, Length 1,076 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-214ENST00000556063 RPL22L1Q6P5R6 122 aaKnown RBP6.55□□□□□ -1.36
TDP1-214ENST00000556063 PRSS45Q7RTY3 260 aa6.55□□□□□ -1.36
TDP1-214ENST00000556063 CATSPERDQ86XM0 798 aa6.55□□□□□ -1.36
TDP1-214ENST00000556063 CSNK2A3Q8NEV1 391 aa6.55□□□□□ -1.36
TDP1-214ENST00000556063 OR8B12Q8NGG6 310 aa6.55□□□□□ -1.36
TDP1-214ENST00000556063 OR2G2Q8NGZ5 317 aa6.55□□□□□ -1.36
TDP1-214ENST00000556063 RORBQ92753 470 aa6.55□□□□□ -1.36
TDP1-214ENST00000556063 NINJ1Q92982 152 aa6.55□□□□□ -1.36
TDP1-214ENST00000556063 SPSB4Q96A44 273 aa6.55□□□□□ -1.36
TDP1-214ENST00000556063 SGK3Q96BR1 496 aa6.55□□□□□ -1.36
TDP1-214ENST00000556063 PELI1Q96FA3 418 aa6.55□□□□□ -1.36
TDP1-214ENST00000556063 LURAP1Q96LR2 239 aa6.55□□□□□ -1.36
TDP1-214ENST00000556063 DIRC2Q96SL1 478 aa6.55□□□□□ -1.36
TDP1-214ENST00000556063 RHNO1Q9BSD3 238 aa6.55□□□□□ -1.36
TDP1-214ENST00000556063 TRAF4Q9BUZ4 470 aaPredicted RBP6.55□□□□□ -1.36
TDP1-214ENST00000556063 REPIN1Q9BWE0 567 aaKnown RBP6.55□□□□□ -1.36
TDP1-214ENST00000556063 COMMD4Q9H0A8 199 aa6.55□□□□□ -1.36
TDP1-214ENST00000556063 RAB1BQ9H0U4 201 aa6.55□□□□□ -1.36
TDP1-214ENST00000556063 TAAR3PQ9P1P4 343 aa6.55□□□□□ -1.36
TDP1-214ENST00000556063 ERVK-18Q9QC07 812 aa6.55□□□□□ -1.36
TDP1-214ENST00000556063 FZR1Q9UM11 496 aa6.55□□□□□ -1.36
TDP1-214ENST00000556063 UNC79Q9P2D8 2635 aa6.55□□□□□ -1.36
TDP1-214ENST00000556063 COL12A1Q99715 3063 aa6.55□□□□□ -1.36
TDP1-214ENST00000556063 CCDC168Q8NDH2 2452 aa6.54□□□□□ -1.36
TDP1-214ENST00000556063 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP6.54□□□□□ -1.36
TDP1-214ENST00000556063 TRBV2A0A0J9YWF9 115 aa6.54□□□□□ -1.36
TDP1-214ENST00000556063 LOC390937A0A1W2PQ73 354 aa6.54□□□□□ -1.36
TDP1-214ENST00000556063 TMEM212A6NML5 194 aa6.54□□□□□ -1.36
TDP1-214ENST00000556063 ANKRD30BLA7E2S9 258 aa6.54□□□□□ -1.36
TDP1-214ENST00000556063 CD300LBA8K4G0 201 aa6.54□□□□□ -1.36
TDP1-214ENST00000556063 IQCF6A8MYZ5 107 aa6.54□□□□□ -1.36
TDP1-214ENST00000556063 SYT7O43581 403 aa6.54□□□□□ -1.36
TDP1-214ENST00000556063 SRSF10O75494 262 aaKnown RBP6.54□□□□□ -1.36
TDP1-214ENST00000556063 TNFAIP8O95379 198 aa6.54□□□□□ -1.36
TDP1-214ENST00000556063 CLPTM1O96005 669 aa6.54□□□□□ -1.36
TDP1-214ENST00000556063 PNPP00491 289 aa6.54□□□□□ -1.36
TDP1-214ENST00000556063 TTRP02766 147 aa6.54□□□□□ -1.36
TDP1-214ENST00000556063 SOD3P08294 240 aa6.54□□□□□ -1.36
TDP1-214ENST00000556063 TNFSF4P23510 183 aa6.54□□□□□ -1.36
TDP1-214ENST00000556063 GNALP38405 381 aa6.54□□□□□ -1.36
TDP1-214ENST00000556063 MPV17P39210 176 aa6.54□□□□□ -1.36
TDP1-214ENST00000556063 GSK3AP49840 483 aa6.54□□□□□ -1.36
TDP1-214ENST00000556063 PPOXP50336 477 aa6.54□□□□□ -1.36
TDP1-214ENST00000556063 ZNF81P51508 661 aa6.54□□□□□ -1.36
TDP1-214ENST00000556063 CHN2P52757 468 aa6.54□□□□□ -1.36
TDP1-214ENST00000556063 BDH1Q02338 343 aa6.54□□□□□ -1.36
TDP1-214ENST00000556063 MVKQ03426 396 aa6.54□□□□□ -1.36
TDP1-214ENST00000556063 MFGE8Q08431 387 aaPredicted RBP6.54□□□□□ -1.36
TDP1-214ENST00000556063 MZT1Q08AG7 82 aa6.54□□□□□ -1.36
TDP1-214ENST00000556063 HLXQ14774 488 aaPredicted RBP6.54□□□□□ -1.36
TDP1-214ENST00000556063 SPHARQ15513 63 aa6.54□□□□□ -1.36
TDP1-214ENST00000556063 SWI5Q1ZZU3 235 aa6.54□□□□□ -1.36
TDP1-214ENST00000556063 MST1LQ2TV78 715 aa6.54□□□□□ -1.36
TDP1-214ENST00000556063 PCGF3Q3KNV8 242 aa6.54□□□□□ -1.36
TDP1-214ENST00000556063 WDR38Q5JTN6 314 aa6.54□□□□□ -1.36
TDP1-214ENST00000556063 FAM209AQ5JX71 171 aa6.54□□□□□ -1.36
TDP1-214ENST00000556063 OR2G6Q5TZ20 316 aa6.54□□□□□ -1.36
TDP1-214ENST00000556063 OR2T2Q6IF00 324 aa6.54□□□□□ -1.36
TDP1-214ENST00000556063 DOK3Q7L591 496 aa6.54□□□□□ -1.36
TDP1-214ENST00000556063 KLBQ86Z14 1044 aa6.54□□□□□ -1.36
TDP1-214ENST00000556063 ZNF676Q8N7Q3 588 aa6.54□□□□□ -1.36
TDP1-214ENST00000556063 NANOGP1Q8N7R0 232 aa6.54□□□□□ -1.36
TDP1-214ENST00000556063 OR8G5Q8NG78 346 aa6.54□□□□□ -1.36
TDP1-214ENST00000556063 OR13G1Q8NGZ3 307 aa6.54□□□□□ -1.36
TDP1-214ENST00000556063 OR2AE1Q8NHA4 323 aa6.54□□□□□ -1.36
TDP1-214ENST00000556063 OR51E1Q8TCB6 317 aa6.54□□□□□ -1.36
TDP1-214ENST00000556063 GATAD2BQ8WXI9 593 aa6.54□□□□□ -1.36
TDP1-214ENST00000556063 FCGR1BQ92637 280 aa6.54□□□□□ -1.36
TDP1-214ENST00000556063 FAM71F1Q96KD3 344 aaPredicted RBP6.54□□□□□ -1.36
TDP1-214ENST00000556063 VRK1Q99986 396 aaPredicted RBP6.54□□□□□ -1.36
TDP1-214ENST00000556063 ZNF649Q9BS31 505 aa6.54□□□□□ -1.36
TDP1-214ENST00000556063 EGLN1Q9GZT9 426 aa6.54□□□□□ -1.36
TDP1-214ENST00000556063 ISG20L2Q9H9L3 353 aaKnown RBP6.54□□□□□ -1.36
TDP1-214ENST00000556063 PLEKHA1Q9HB21 404 aa6.54□□□□□ -1.36
TDP1-214ENST00000556063 BARX1Q9HBU1 254 aaPredicted RBP6.54□□□□□ -1.36
TDP1-214ENST00000556063 VCX3AQ9NNX9 186 aa6.54□□□□□ -1.36
TDP1-214ENST00000556063 ABCB9Q9NP78 766 aa6.54□□□□□ -1.36
TDP1-214ENST00000556063 G6PC2Q9NQR9 355 aa6.54□□□□□ -1.36
TDP1-214ENST00000556063 GPR84Q9NQS5 396 aa6.54□□□□□ -1.36
TDP1-214ENST00000556063 TMEM100Q9NV29 134 aa6.54□□□□□ -1.36
TDP1-214ENST00000556063 BEX4Q9NWD9 120 aaPredicted RBP6.54□□□□□ -1.36
TDP1-214ENST00000556063 CLEC2DQ9UHP7 191 aa6.54□□□□□ -1.36
TDP1-214ENST00000556063 ST6GALNAC2Q9UJ37 374 aa6.54□□□□□ -1.36
TDP1-214ENST00000556063 ZDHHC8Q9ULC8 765 aa6.54□□□□□ -1.36
TDP1-214ENST00000556063 SLC22A13Q9Y226 551 aa6.54□□□□□ -1.36
TDP1-214ENST00000556063 PLEKHA6Q9Y2H5 1048 aa6.54□□□□□ -1.36
TDP1-214ENST00000556063 ANKRD17O75179 2603 aaKnown RBP6.54□□□□□ -1.36
TDP1-214ENST00000556063 POLQO75417 2590 aa6.53□□□□□ -1.36
TDP1-214ENST00000556063 hCG_38984A0A1B0GV85 526 aa6.53□□□□□ -1.36
TDP1-214ENST00000556063 ANXA2P2A6NMY6 339 aa6.53□□□□□ -1.36
TDP1-214ENST00000556063 OR4C45A6NMZ5 311 aa6.53□□□□□ -1.36
TDP1-214ENST00000556063 DHRS7CA6NNS2 312 aa6.53□□□□□ -1.36
TDP1-214ENST00000556063 H7C417 338 aa6.53□□□□□ -1.36
TDP1-214ENST00000556063 P2RY10O00398 339 aa6.53□□□□□ -1.36
TDP1-214ENST00000556063 TPD52L2O43399 206 aaKnown RBP6.53□□□□□ -1.36
TDP1-214ENST00000556063 DHRS3O75911 302 aa6.53□□□□□ -1.36
TDP1-214ENST00000556063 SERPINA3P01011 423 aa6.53□□□□□ -1.36
TDP1-214ENST00000556063 CD8AP01732 235 aa6.53□□□□□ -1.36
TDP1-214ENST00000556063 MT-ND2P03891 347 aa6.53□□□□□ -1.36
TDP1-214ENST00000556063 ISG15P05161 165 aa6.53□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 59.4 ms