RNA–Protein interactions for RNA: ENST00000555254.5

PSEN1-212, Transcript of presenilin 1, humanhuman

TSL 3

Gene PSEN1, Length 754 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-212ENST00000555254 H3BSH0 61 aa15.31■□□□□ 0.04
PSEN1-212ENST00000555254 MTRF1O75570 445 aaKnown RBP15.31■□□□□ 0.04
PSEN1-212ENST00000555254 CLEC2LP0C7M8 214 aa15.31■□□□□ 0.04
PSEN1-212ENST00000555254 ZNF20P17024 532 aa15.31■□□□□ 0.04
PSEN1-212ENST00000555254 RAB3BP20337 219 aa15.31■□□□□ 0.04
PSEN1-212ENST00000555254 CCNOP22674 350 aa15.31■□□□□ 0.04
PSEN1-212ENST00000555254 PSMD7P51665 324 aa15.31■□□□□ 0.04
PSEN1-212ENST00000555254 TFF3Q07654 80 aa15.31■□□□□ 0.04
PSEN1-212ENST00000555254 HNRNPA0Q13151 305 aaKnown RBP15.31■□□□□ 0.04
PSEN1-212ENST00000555254 RSPO1Q2MKA7 263 aaPredicted RBP15.31■□□□□ 0.04
PSEN1-212ENST00000555254 GFOD2Q3B7J2 385 aa15.31■□□□□ 0.04
PSEN1-212ENST00000555254 KRTAP27-1Q3LI81 207 aa15.31■□□□□ 0.04
PSEN1-212ENST00000555254 C1QTNF12Q5T7M4 302 aa15.31■□□□□ 0.04
PSEN1-212ENST00000555254 FAM27D1Q5T7N8 215 aa15.31■□□□□ 0.04
PSEN1-212ENST00000555254 CPEB3Q8NE35 698 aaKnown RBP15.31■□□□□ 0.04
PSEN1-212ENST00000555254 OR10AC1Q8NH08 325 aa15.31■□□□□ 0.04
PSEN1-212ENST00000555254 TMEM106AQ96A25 262 aa15.31■□□□□ 0.04
PSEN1-212ENST00000555254 KCNS3Q9BQ31 491 aa15.31■□□□□ 0.04
PSEN1-212ENST00000555254 USB1Q9BQ65 265 aaKnown RBP15.31■□□□□ 0.04
PSEN1-212ENST00000555254 GPR84Q9NQS5 396 aa15.31■□□□□ 0.04
PSEN1-212ENST00000555254 NPDC1Q9NQX5 325 aaPredicted RBP15.31■□□□□ 0.04
PSEN1-212ENST00000555254 B3GNT2Q9NY97 397 aa15.31■□□□□ 0.04
PSEN1-212ENST00000555254 ELOVL5Q9NYP7 299 aa15.31■□□□□ 0.04
PSEN1-212ENST00000555254 ZNF391Q9UJN7 358 aa15.31■□□□□ 0.04
PSEN1-212ENST00000555254 C5orf49A4QMS7 147 aa15.3■□□□□ 0.04
PSEN1-212ENST00000555254 SERPINA5P05154 406 aa15.3■□□□□ 0.04
PSEN1-212ENST00000555254 CBR1P16152 277 aa15.3■□□□□ 0.04
PSEN1-212ENST00000555254 S100A5P33763 92 aa15.3■□□□□ 0.04
PSEN1-212ENST00000555254 ASCL1P50553 236 aa15.3■□□□□ 0.04
PSEN1-212ENST00000555254 SNTB1Q13884 538 aaKnown RBP15.3■□□□□ 0.04
PSEN1-212ENST00000555254 TBC1D28Q2M2D7 210 aa15.3■□□□□ 0.04
PSEN1-212ENST00000555254 MZT2AQ6P582 158 aa15.3■□□□□ 0.04
PSEN1-212ENST00000555254 NAA40Q86UY6 237 aa15.3■□□□□ 0.04
PSEN1-212ENST00000555254 STEAP2Q8NFT2 490 aa15.3■□□□□ 0.04
PSEN1-212ENST00000555254 AKAP1Q92667 903 aaKnown RBP eCLIP15.3■□□□□ 0.04
PSEN1-212ENST00000555254 MARVELD3Q96A59 401 aa15.3■□□□□ 0.04
PSEN1-212ENST00000555254 LRRC46Q96FV0 321 aa15.3■□□□□ 0.04
PSEN1-212ENST00000555254 FAM71F1Q96KD3 344 aaPredicted RBP15.3■□□□□ 0.04
PSEN1-212ENST00000555254 RGCCQ9H4X1 137 aa15.3■□□□□ 0.04
PSEN1-212ENST00000555254 CDH20Q9HBT6 801 aa15.3■□□□□ 0.04
PSEN1-212ENST00000555254 EIF3KQ9UBQ5 218 aaKnown RBP15.3■□□□□ 0.04
PSEN1-212ENST00000555254 A8MXE2 369 aa15.29■□□□□ 0.04
PSEN1-212ENST00000555254 PIN1P1O15428 100 aa15.29■□□□□ 0.04
PSEN1-212ENST00000555254 XRCC2O43543 280 aa15.29■□□□□ 0.04
PSEN1-212ENST00000555254 CFL1P23528 166 aaKnown RBP15.29■□□□□ 0.04
PSEN1-212ENST00000555254 GNALP38405 381 aa15.29■□□□□ 0.04
PSEN1-212ENST00000555254 MAGEB1P43366 347 aa15.29■□□□□ 0.04
PSEN1-212ENST00000555254 PPP3R1P63098 170 aa15.29■□□□□ 0.04
PSEN1-212ENST00000555254 MALLQ13021 153 aa15.29■□□□□ 0.04
PSEN1-212ENST00000555254 TSC22D1Q15714 1073 aa15.29■□□□□ 0.04
PSEN1-212ENST00000555254 ZNF474Q6S9Z5 364 aaPredicted RBP15.29■□□□□ 0.04
PSEN1-212ENST00000555254 PRSS45Q7RTY3 260 aa15.29■□□□□ 0.04
PSEN1-212ENST00000555254 SLC30A7Q8NEW0 376 aa15.29■□□□□ 0.04
PSEN1-212ENST00000555254 OR51A4Q8NGJ6 313 aa15.29■□□□□ 0.04
PSEN1-212ENST00000555254 FGGYQ96C11 551 aa15.29■□□□□ 0.04
PSEN1-212ENST00000555254 MUCL1Q96DR8 90 aa15.29■□□□□ 0.04
PSEN1-212ENST00000555254 SLIRPQ9GZT3 109 aaKnown RBP15.29■□□□□ 0.04
PSEN1-212ENST00000555254 C6orf62Q9GZU0 229 aaPredicted RBP15.29■□□□□ 0.04
PSEN1-212ENST00000555254 PPIL3Q9H2H8 161 aaKnown RBP15.29■□□□□ 0.04
PSEN1-212ENST00000555254 PLEKHA1Q9HB21 404 aa15.29■□□□□ 0.04
PSEN1-212ENST00000555254 ZNF275Q9NSD4 429 aaPredicted RBP15.29■□□□□ 0.04
PSEN1-212ENST00000555254 FOXJ3Q9UPW0 622 aa15.29■□□□□ 0.04
PSEN1-212ENST00000555254 DOCK7Q96N67 2140 aa15.29■□□□□ 0.04
PSEN1-212ENST00000555254 NCOA6Q14686 2063 aaPredicted RBP15.29■□□□□ 0.04
PSEN1-212ENST00000555254 A0A075B6Q4 140 aa15.28■□□□□ 0.04
PSEN1-212ENST00000555254 A0A1B0GTI1 187 aa15.28■□□□□ 0.04
PSEN1-212ENST00000555254 MEGF11A6BM72 1044 aa15.28■□□□□ 0.04
PSEN1-212ENST00000555254 OR5H1A6NKK0 313 aa15.28■□□□□ 0.04
PSEN1-212ENST00000555254 PSMB1P20618 241 aaKnown RBP15.28■□□□□ 0.04
PSEN1-212ENST00000555254 LINC00299Q6ZSB3 139 aa15.28■□□□□ 0.04
PSEN1-212ENST00000555254 SERPINA12Q8IW75 414 aa15.28■□□□□ 0.04
PSEN1-212ENST00000555254 WDR31Q8NA23 367 aa15.28■□□□□ 0.04
PSEN1-212ENST00000555254 OR5L1Q8NGL2 311 aa15.28■□□□□ 0.04
PSEN1-212ENST00000555254 OR5D14Q8NGL3 314 aa15.28■□□□□ 0.04
PSEN1-212ENST00000555254 ACOT12Q8WYK0 555 aa15.28■□□□□ 0.04
PSEN1-212ENST00000555254 RNASE6Q93091 150 aaKnown RBP15.28■□□□□ 0.04
PSEN1-212ENST00000555254 APOBEC3DQ96AK3 386 aaPredicted RBP15.28■□□□□ 0.04
PSEN1-212ENST00000555254 POM121L2Q96KW2 1035 aa15.28■□□□□ 0.04
PSEN1-212ENST00000555254 DACH2Q96NX9 599 aa15.28■□□□□ 0.04
PSEN1-212ENST00000555254 C1QTNF5Q9BXJ0 243 aa15.28■□□□□ 0.04
PSEN1-212ENST00000555254 NOX3Q9HBY0 568 aa15.28■□□□□ 0.04
PSEN1-212ENST00000555254 PEX16Q9Y5Y5 336 aa15.28■□□□□ 0.04
PSEN1-212ENST00000555254 PCNX1Q96RV3 2341 aa15.28■□□□□ 0.04
PSEN1-212ENST00000555254 LOC100509620A0A075B734 347 aa15.27■□□□□ 0.04
PSEN1-212ENST00000555254 A0A1W2PR80 420 aa15.27■□□□□ 0.04
PSEN1-212ENST00000555254 SMIM30A4D0T7 59 aa15.27■□□□□ 0.04
PSEN1-212ENST00000555254 ZNF503-AS2A6NEH8 195 aa15.27■□□□□ 0.04
PSEN1-212ENST00000555254 ANXA2P2A6NMY6 339 aa15.27■□□□□ 0.04
PSEN1-212ENST00000555254 NOTOA8MTQ0 251 aa15.27■□□□□ 0.04
PSEN1-212ENST00000555254 CCL1P22362 96 aa15.27■□□□□ 0.04
PSEN1-212ENST00000555254 RANBP1P43487 201 aa15.27■□□□□ 0.04
PSEN1-212ENST00000555254 TIMM23BQ5SRD1 257 aa15.27■□□□□ 0.04
PSEN1-212ENST00000555254 IDNKQ5T6J7 187 aa15.27■□□□□ 0.04
PSEN1-212ENST00000555254 UNQ6126/PRO20091Q6UXV3 157 aa15.27■□□□□ 0.04
PSEN1-212ENST00000555254 ITFG2Q969R8 447 aa15.27■□□□□ 0.04
PSEN1-212ENST00000555254 SGK3Q96BR1 496 aa15.27■□□□□ 0.04
PSEN1-212ENST00000555254 REEP6Q96HR9 211 aa15.27■□□□□ 0.04
PSEN1-212ENST00000555254 CEP19Q96LK0 163 aa15.27■□□□□ 0.04
PSEN1-212ENST00000555254 SPOCK3Q9BQ16 436 aa15.27■□□□□ 0.04
PSEN1-212ENST00000555254 NXF2Q9GZY0 626 aaKnown RBP15.27■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms