RNA–Protein interactions for RNA: ENST00000555002.5

SYNE2-216, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best) BASIC

Gene SYNE2, Length 11,532 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-216ENST00000555002 FLYWCH2Q96CP2 140 aaKnown RBP6.26□□□□□ -1.41
SYNE2-216ENST00000555002 MRPL37Q9BZE1 423 aaKnown RBP6.26□□□□□ -1.41
SYNE2-216ENST00000555002 MARCH5Q9NX47 278 aa6.26□□□□□ -1.41
SYNE2-216ENST00000555002 SYT5O00445 386 aa6.26□□□□□ -1.41
SYNE2-216ENST00000555002 PAPLNO95428 1278 aa6.26□□□□□ -1.41
SYNE2-216ENST00000555002 OR10P1Q8NGE3 313 aa6.26□□□□□ -1.41
SYNE2-216ENST00000555002 OR10Z1Q8NGY1 313 aa6.26□□□□□ -1.41
SYNE2-216ENST00000555002 MAFAQ8NHW3 353 aaPredicted RBP6.26□□□□□ -1.41
SYNE2-216ENST00000555002 LINC00052Q96N35 136 aa6.26□□□□□ -1.41
SYNE2-216ENST00000555002 GPX7Q96SL4 187 aaPredicted RBP6.26□□□□□ -1.41
SYNE2-216ENST00000555002 PARD6AQ9NPB6 346 aa6.26□□□□□ -1.41
SYNE2-216ENST00000555002 RCL1Q9Y2P8 373 aaKnown RBP6.26□□□□□ -1.41
SYNE2-216ENST00000555002 CD68P34810 354 aaPredicted RBP6.26□□□□□ -1.41
SYNE2-216ENST00000555002 C19orf54Q5BKX5 351 aa6.26□□□□□ -1.41
SYNE2-216ENST00000555002 PRSS45Q7RTY3 260 aa6.26□□□□□ -1.41
SYNE2-216ENST00000555002 SPRED1Q7Z699 444 aa6.26□□□□□ -1.41
SYNE2-216ENST00000555002 TMEM179BQ7Z7N9 219 aa6.26□□□□□ -1.41
SYNE2-216ENST00000555002 IL22RA2Q969J5 263 aa6.26□□□□□ -1.41
SYNE2-216ENST00000555002 TMEM140Q9NV12 185 aa6.26□□□□□ -1.41
SYNE2-216ENST00000555002 CNOT2Q9NZN8 540 aaKnown RBP6.26□□□□□ -1.41
SYNE2-216ENST00000555002 MRC1P22897 1456 aa6.26□□□□□ -1.41
SYNE2-216ENST00000555002 HOXD9P28356 352 aaPredicted RBP6.26□□□□□ -1.41
SYNE2-216ENST00000555002 RAB1AP62820 205 aa6.26□□□□□ -1.41
SYNE2-216ENST00000555002 CEBPEQ15744 281 aa6.26□□□□□ -1.41
SYNE2-216ENST00000555002 FFAR4Q5NUL3 377 aa6.26□□□□□ -1.41
SYNE2-216ENST00000555002 CCL17Q92583 94 aa6.26□□□□□ -1.41
SYNE2-216ENST00000555002 ISG20Q96AZ6 181 aaKnown RBP6.26□□□□□ -1.41
SYNE2-216ENST00000555002 CSF3RQ99062 836 aa6.26□□□□□ -1.41
SYNE2-216ENST00000555002 SIAEQ9HAT2 523 aa6.26□□□□□ -1.41
SYNE2-216ENST00000555002 B3GALT4O96024 378 aa6.26□□□□□ -1.41
SYNE2-216ENST00000555002 S100A8P05109 93 aa6.26□□□□□ -1.41
SYNE2-216ENST00000555002 RACK1P63244 317 aaKnown RBP6.26□□□□□ -1.41
SYNE2-216ENST00000555002 BCORP1Q8N888 145 aa6.26□□□□□ -1.41
SYNE2-216ENST00000555002 ARHGDIGQ99819 225 aa6.26□□□□□ -1.41
SYNE2-216ENST00000555002 WNK1Q9H4A3 2382 aa6.26□□□□□ -1.41
SYNE2-216ENST00000555002 CTDSP2O14595 271 aa6.26□□□□□ -1.41
SYNE2-216ENST00000555002 ICOSLGO75144 302 aa6.26□□□□□ -1.41
SYNE2-216ENST00000555002 CD27P26842 260 aa6.26□□□□□ -1.41
SYNE2-216ENST00000555002 TGFBR1P36897 503 aa6.26□□□□□ -1.41
SYNE2-216ENST00000555002 TPMTP51580 245 aa6.26□□□□□ -1.41
SYNE2-216ENST00000555002 CLDN15P56746 228 aa6.26□□□□□ -1.41
SYNE2-216ENST00000555002 TCTAP57738 103 aa6.26□□□□□ -1.41
SYNE2-216ENST00000555002 PRDX1Q06830 199 aaKnown RBP6.26□□□□□ -1.41
SYNE2-216ENST00000555002 C6orf106Q9H6K1 298 aaPredicted RBP6.26□□□□□ -1.41
SYNE2-216ENST00000555002 MYOZ1Q9NP98 299 aaPredicted RBP6.26□□□□□ -1.41
SYNE2-216ENST00000555002 FAM181BA6NEQ2 426 aa6.26□□□□□ -1.41
SYNE2-216ENST00000555002 TYROBPO43914 113 aa6.26□□□□□ -1.41
SYNE2-216ENST00000555002 CSO75390 466 aaKnown RBP6.26□□□□□ -1.41
SYNE2-216ENST00000555002 PPP2CBP62714 309 aa6.26□□□□□ -1.41
SYNE2-216ENST00000555002 ENDOGQ14249 297 aaKnown RBP6.26□□□□□ -1.41
SYNE2-216ENST00000555002 RPUSD3Q6P087 351 aaKnown RBP6.26□□□□□ -1.41
SYNE2-216ENST00000555002 WDR88Q6ZMY6 472 aa6.26□□□□□ -1.41
SYNE2-216ENST00000555002 TIMP4Q99727 224 aa6.26□□□□□ -1.41
SYNE2-216ENST00000555002 NIT2Q9NQR4 276 aa6.26□□□□□ -1.41
SYNE2-216ENST00000555002 ABCA7Q8IZY2 2146 aa6.26□□□□□ -1.41
SYNE2-216ENST00000555002 K7ESF4 209 aa6.26□□□□□ -1.41
SYNE2-216ENST00000555002 TOX3O15405 576 aaPredicted RBP6.26□□□□□ -1.41
SYNE2-216ENST00000555002 HRO43593 1189 aa6.26□□□□□ -1.41
SYNE2-216ENST00000555002 GCGP01275 180 aa6.26□□□□□ -1.41
SYNE2-216ENST00000555002 CTXN2P0C2S0 81 aa6.26□□□□□ -1.41
SYNE2-216ENST00000555002 APOBEC1P41238 236 aaKnown RBP6.26□□□□□ -1.41
SYNE2-216ENST00000555002 LRP11Q86VZ4 500 aa6.26□□□□□ -1.41
SYNE2-216ENST00000555002 LTB4R2Q9NPC1 389 aa6.26□□□□□ -1.41
SYNE2-216ENST00000555002 SDR39U1Q9NRG7 319 aaPredicted RBP6.26□□□□□ -1.41
SYNE2-216ENST00000555002 PLA2G3Q9NZ20 509 aa6.26□□□□□ -1.41
SYNE2-216ENST00000555002 LSM2Q9Y333 95 aaKnown RBP6.26□□□□□ -1.41
SYNE2-216ENST00000555002 RHBDL1O75783 438 aa6.26□□□□□ -1.41
SYNE2-216ENST00000555002 CSN3P07498 182 aa6.26□□□□□ -1.41
SYNE2-216ENST00000555002 GNG4P50150 75 aa6.26□□□□□ -1.41
SYNE2-216ENST00000555002 PPOXP50336 477 aa6.26□□□□□ -1.41
SYNE2-216ENST00000555002 EMX1Q04741 257 aaPredicted RBP6.26□□□□□ -1.41
SYNE2-216ENST00000555002 ZNF574Q6ZN55 896 aaPredicted RBP6.26□□□□□ -1.41
SYNE2-216ENST00000555002 RFLNAQ6ZTI6 216 aa6.26□□□□□ -1.41
SYNE2-216ENST00000555002 OR13H1Q8NG92 308 aa6.26□□□□□ -1.41
SYNE2-216ENST00000555002 DUS3LQ96G46 650 aaKnown RBP6.26□□□□□ -1.41
SYNE2-216ENST00000555002 FITM1A5D6W6 292 aa6.25□□□□□ -1.41
SYNE2-216ENST00000555002 SPRY1O43609 319 aaPredicted RBP6.25□□□□□ -1.41
SYNE2-216ENST00000555002 LYZL6O75951 148 aa6.25□□□□□ -1.41
SYNE2-216ENST00000555002 MT-ATP6P00846 226 aa6.25□□□□□ -1.41
SYNE2-216ENST00000555002 IGHV3-13P01766 116 aa6.25□□□□□ -1.41
SYNE2-216ENST00000555002 IGHV3-7P01780 117 aa6.25□□□□□ -1.41
SYNE2-216ENST00000555002 SP1P08047 785 aa6.25□□□□□ -1.41
SYNE2-216ENST00000555002 T-ENOLP0DO92 83 aa6.25□□□□□ -1.41
SYNE2-216ENST00000555002 G6PCP35575 357 aa6.25□□□□□ -1.41
SYNE2-216ENST00000555002 KIR2DL1P43626 348 aaPredicted RBP6.25□□□□□ -1.41
SYNE2-216ENST00000555002 KIR2DL2P43627 348 aaPredicted RBP6.25□□□□□ -1.41
SYNE2-216ENST00000555002 RPL24P83731 157 aaKnown RBP6.25□□□□□ -1.41
SYNE2-216ENST00000555002 ECSCRQ19T08 205 aa6.25□□□□□ -1.41
SYNE2-216ENST00000555002 HFEQ30201 348 aa6.25□□□□□ -1.41
SYNE2-216ENST00000555002 GPR87Q9BY21 358 aa6.25□□□□□ -1.41
SYNE2-216ENST00000555002 RABAC1Q9UI14 185 aa6.25□□□□□ -1.41
SYNE2-216ENST00000555002 ACACAQ13085 2346 aa6.25□□□□□ -1.41
SYNE2-216ENST00000555002 TRBV23-1A0A0A0MS06 115 aa6.25□□□□□ -1.41
SYNE2-216ENST00000555002 M0R3E3 92 aa6.25□□□□□ -1.41
SYNE2-216ENST00000555002 UBE2L6O14933 153 aa6.25□□□□□ -1.41
SYNE2-216ENST00000555002 APELAP0DMC3 54 aa6.25□□□□□ -1.41
SYNE2-216ENST00000555002 CRISP2P16562 243 aa6.25□□□□□ -1.41
SYNE2-216ENST00000555002 PI3P19957 117 aa6.25□□□□□ -1.41
SYNE2-216ENST00000555002 HOXC13P31276 330 aa6.25□□□□□ -1.41
SYNE2-216ENST00000555002 ETV6P41212 452 aa6.25□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms