RNA–Protein interactions for RNA: ENST00000554811.5

XRCC3-208, Transcript of X-ray repair cross complementing 3, humanhuman

TSL 2

Gene XRCC3, Length 3,668 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-208ENST00000554811 NAGAP17050 411 aa10.56□□□□□ -0.72
XRCC3-208ENST00000554811 GLRA1P23415 457 aa10.56□□□□□ -0.72
XRCC3-208ENST00000554811 PNLDC1Q8NA58 520 aaKnown RBP10.56□□□□□ -0.72
XRCC3-208ENST00000554811 OR5T2Q8NGG2 359 aa10.56□□□□□ -0.72
XRCC3-208ENST00000554811 SLC39A7Q92504 469 aa10.56□□□□□ -0.72
XRCC3-208ENST00000554811 GAREM1Q9H706 876 aa10.56□□□□□ -0.72
XRCC3-208ENST00000554811 ZNF160Q9HCG1 818 aa10.56□□□□□ -0.72
XRCC3-208ENST00000554811 IGHV1OR15-9A0A0B4J2B8 117 aa10.55□□□□□ -0.72
XRCC3-208ENST00000554811 ATG12O94817 140 aa10.55□□□□□ -0.72
XRCC3-208ENST00000554811 FCGR2AP12318 317 aa10.55□□□□□ -0.72
XRCC3-208ENST00000554811 LAP3P28838 519 aa10.55□□□□□ -0.72
XRCC3-208ENST00000554811 ASCL1P50553 236 aa10.55□□□□□ -0.72
XRCC3-208ENST00000554811 SWI5Q1ZZU3 235 aa10.55□□□□□ -0.72
XRCC3-208ENST00000554811 SP6Q3SY56 376 aa10.55□□□□□ -0.72
XRCC3-208ENST00000554811 LYG2Q86SG7 212 aa10.55□□□□□ -0.72
XRCC3-208ENST00000554811 OR5M8Q8NGP6 311 aa10.55□□□□□ -0.72
XRCC3-208ENST00000554811 CMTM3Q96MX0 182 aa10.55□□□□□ -0.72
XRCC3-208ENST00000554811 ZNF416Q9BWM5 594 aa10.55□□□□□ -0.72
XRCC3-208ENST00000554811 NKX6-2Q9C056 277 aaPredicted RBP10.55□□□□□ -0.72
XRCC3-208ENST00000554811 CHST11Q9NPF2 352 aa10.55□□□□□ -0.72
XRCC3-208ENST00000554811 PLEK2Q9NYT0 353 aa10.55□□□□□ -0.72
XRCC3-208ENST00000554811 RAB22AQ9UL26 194 aa10.55□□□□□ -0.72
XRCC3-208ENST00000554811 LHX6Q9UPM6 363 aa10.55□□□□□ -0.72
XRCC3-208ENST00000554811 ZNF407Q9C0G0 2248 aa10.55□□□□□ -0.72
XRCC3-208ENST00000554811 A0A0D9SG52 128 aa10.55□□□□□ -0.72
XRCC3-208ENST00000554811 C9orf170A2RU37 121 aa10.55□□□□□ -0.72
XRCC3-208ENST00000554811 NUDT21O43809 227 aaKnown RBP10.55□□□□□ -0.72
XRCC3-208ENST00000554811 EIF4E2O60573 245 aaKnown RBP10.55□□□□□ -0.72
XRCC3-208ENST00000554811 SCRG1O75711 98 aa10.55□□□□□ -0.72
XRCC3-208ENST00000554811 NME1P15531 152 aaKnown RBP10.55□□□□□ -0.72
XRCC3-208ENST00000554811 CASRP41180 1078 aa10.55□□□□□ -0.72
XRCC3-208ENST00000554811 MEF2DQ14814 521 aa10.55□□□□□ -0.72
XRCC3-208ENST00000554811 LY6G6FQ5SQ64 297 aa10.55□□□□□ -0.72
XRCC3-208ENST00000554811 TMEM229BQ8NBD8 167 aa10.55□□□□□ -0.72
XRCC3-208ENST00000554811 OR51F2Q8NH61 342 aa10.55□□□□□ -0.72
XRCC3-208ENST00000554811 UQCC2Q9BRT2 126 aa10.55□□□□□ -0.72
XRCC3-208ENST00000554811 ADAM19Q9H013 955 aa10.55□□□□□ -0.72
XRCC3-208ENST00000554811 AKIRIN1Q9H9L7 192 aaPredicted RBP10.55□□□□□ -0.72
XRCC3-208ENST00000554811 PARPBPQ9NWS1 579 aa10.55□□□□□ -0.72
XRCC3-208ENST00000554811 MMACHCQ9Y4U1 282 aa10.55□□□□□ -0.72
XRCC3-208ENST00000554811 IGHV1OR21-1A0A087WYE8 117 aa10.55□□□□□ -0.72
XRCC3-208ENST00000554811 ZNF850A8MQ14 1090 aa10.55□□□□□ -0.72
XRCC3-208ENST00000554811 HSPB6O14558 160 aa10.55□□□□□ -0.72
XRCC3-208ENST00000554811 CLPSP04118 112 aa10.55□□□□□ -0.72
XRCC3-208ENST00000554811 CELA2AP08217 269 aa10.55□□□□□ -0.72
XRCC3-208ENST00000554811 MGMTP16455 207 aa10.55□□□□□ -0.72
XRCC3-208ENST00000554811 CNR1P21554 472 aa10.55□□□□□ -0.72
XRCC3-208ENST00000554811 CX3CR1P49238 355 aa10.55□□□□□ -0.72
XRCC3-208ENST00000554811 GUCA2BQ16661 112 aa10.55□□□□□ -0.72
XRCC3-208ENST00000554811 H3F3CQ6NXT2 135 aa10.55□□□□□ -0.72
XRCC3-208ENST00000554811 TMEM156Q8N614 296 aa10.55□□□□□ -0.72
XRCC3-208ENST00000554811 ESX1Q8N693 406 aa10.55□□□□□ -0.72
XRCC3-208ENST00000554811 NEK7Q8TDX7 302 aa10.55□□□□□ -0.72
XRCC3-208ENST00000554811 MRPS24Q96EL2 167 aaKnown RBP10.55□□□□□ -0.72
XRCC3-208ENST00000554811 A6NIZ1 184 aa10.54□□□□□ -0.72
XRCC3-208ENST00000554811 TTRP02766 147 aa10.54□□□□□ -0.72
XRCC3-208ENST00000554811 CSTBP04080 98 aaKnown RBP10.54□□□□□ -0.72
XRCC3-208ENST00000554811 PNLIPP16233 465 aa10.54□□□□□ -0.72
XRCC3-208ENST00000554811 CD27P26842 260 aa10.54□□□□□ -0.72
XRCC3-208ENST00000554811 RAP1BP61224 184 aa10.54□□□□□ -0.72
XRCC3-208ENST00000554811 RAP1AP62834 184 aa10.54□□□□□ -0.72
XRCC3-208ENST00000554811 C17orf67Q0P5P2 114 aa10.54□□□□□ -0.72
XRCC3-208ENST00000554811 NKAIN1Q4KMZ8 207 aa10.54□□□□□ -0.72
XRCC3-208ENST00000554811 PDSS1Q5T2R2 415 aa10.54□□□□□ -0.72
XRCC3-208ENST00000554811 FAM122CQ6P4D5 195 aa10.54□□□□□ -0.72
XRCC3-208ENST00000554811 ACOT7LQ6ZUV0 252 aa10.54□□□□□ -0.72
XRCC3-208ENST00000554811 OR2AE1Q8NHA4 323 aa10.54□□□□□ -0.72
XRCC3-208ENST00000554811 CDC6Q99741 560 aa10.54□□□□□ -0.72
XRCC3-208ENST00000554811 BCL2L14Q9BZR8 327 aa10.54□□□□□ -0.72
XRCC3-208ENST00000554811 ZNF275Q9NSD4 429 aaPredicted RBP10.54□□□□□ -0.72
XRCC3-208ENST00000554811 SPTAN1Q13813 2472 aaKnown RBP10.54□□□□□ -0.72
XRCC3-208ENST00000554811 HMSDA8MTL9 139 aa10.54□□□□□ -0.72
XRCC3-208ENST00000554811 MED6O75586 246 aa10.54□□□□□ -0.72
XRCC3-208ENST00000554811 TRAPPC6AO75865 159 aa10.54□□□□□ -0.72
XRCC3-208ENST00000554811 PSMB6P28072 239 aa10.54□□□□□ -0.72
XRCC3-208ENST00000554811 RBMXP38159 391 aaKnown RBP10.54□□□□□ -0.72
XRCC3-208ENST00000554811 ID4P47928 161 aa10.54□□□□□ -0.72
XRCC3-208ENST00000554811 GABREP78334 506 aa10.54□□□□□ -0.72
XRCC3-208ENST00000554811 RAB30Q15771 203 aa10.54□□□□□ -0.72
XRCC3-208ENST00000554811 PLEKHN1Q494U1 663 aaPredicted RBP10.54□□□□□ -0.72
XRCC3-208ENST00000554811 SPAG16Q8N0X2 631 aa10.54□□□□□ -0.72
XRCC3-208ENST00000554811 ZSCAN1Q8NBB4 408 aa10.54□□□□□ -0.72
XRCC3-208ENST00000554811 SLC38A9Q8NBW4 561 aa10.54□□□□□ -0.72
XRCC3-208ENST00000554811 DYRK2Q92630 601 aa10.54□□□□□ -0.72
XRCC3-208ENST00000554811 THRSPQ92748 146 aa10.54□□□□□ -0.72
XRCC3-208ENST00000554811 GNRHR2Q96P88 292 aa10.54□□□□□ -0.72
XRCC3-208ENST00000554811 HDHD3Q9BSH5 251 aaPredicted RBP10.54□□□□□ -0.72
XRCC3-208ENST00000554811 MS4A18H0YCH9 400 aa10.54□□□□□ -0.72
XRCC3-208ENST00000554811 M0R036 132 aa10.54□□□□□ -0.72
XRCC3-208ENST00000554811 TIAF1O95411 115 aa10.54□□□□□ -0.72
XRCC3-208ENST00000554811 IGHG1P01857 330 aa10.54□□□□□ -0.72
XRCC3-208ENST00000554811 POU2F2P09086 479 aa10.54□□□□□ -0.72
XRCC3-208ENST00000554811 DBHP09172 617 aa10.54□□□□□ -0.72
XRCC3-208ENST00000554811 PNLIPRP2P54317 469 aa10.54□□□□□ -0.72
XRCC3-208ENST00000554811 UNC119Q13432 240 aa10.54□□□□□ -0.72
XRCC3-208ENST00000554811 ZNF273Q14593 569 aa10.54□□□□□ -0.72
XRCC3-208ENST00000554811 ISXQ2M1V0 245 aa10.54□□□□□ -0.72
XRCC3-208ENST00000554811 MS4A18Q3C1V0 323 aa10.54□□□□□ -0.72
XRCC3-208ENST00000554811 PHLDA2Q53GA4 152 aa10.54□□□□□ -0.72
XRCC3-208ENST00000554811 REG4Q9BYZ8 158 aa10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms