RNA–Protein interactions for RNA: ENST00000554615.1

SEC23A-207, Transcript of Sec23 homolog A, coat complex II component, humanhuman

TSL 1 (best)

Gene SEC23A, Length 3,813 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC23A-207ENST00000554615 DEFB134Q4QY38 66 aa3.01□□□□□ -1.93
SEC23A-207ENST00000554615 PAN3Q58A45 887 aaKnown RBP3.01□□□□□ -1.93
SEC23A-207ENST00000554615 TMEM128Q5BJH2 165 aa3.01□□□□□ -1.93
SEC23A-207ENST00000554615 NMSQ5H8A3 153 aa3.01□□□□□ -1.93
SEC23A-207ENST00000554615 IL20RBQ6UXL0 311 aa3.01□□□□□ -1.93
SEC23A-207ENST00000554615 DOK3Q7L591 496 aa3.01□□□□□ -1.93
SEC23A-207ENST00000554615 PM20D2Q8IYS1 436 aa3.01□□□□□ -1.93
SEC23A-207ENST00000554615 CCDC107Q8WV48 283 aa3.01□□□□□ -1.93
SEC23A-207ENST00000554615 ING5Q8WYH8 240 aa3.01□□□□□ -1.93
SEC23A-207ENST00000554615 MRPL24Q96A35 216 aaKnown RBP3.01□□□□□ -1.93
SEC23A-207ENST00000554615 ZMYND19Q96E35 227 aaPredicted RBP3.01□□□□□ -1.93
SEC23A-207ENST00000554615 ADAT3Q96EY9 351 aaPredicted RBP3.01□□□□□ -1.93
SEC23A-207ENST00000554615 SIGLEC12Q96PQ1 595 aa3.01□□□□□ -1.93
SEC23A-207ENST00000554615 MRPL37Q9BZE1 423 aaKnown RBP3.01□□□□□ -1.93
SEC23A-207ENST00000554615 NELFAQ9H3P2 528 aa3.01□□□□□ -1.93
SEC23A-207ENST00000554615 CNTD2Q9H8S5 307 aa3.01□□□□□ -1.93
SEC23A-207ENST00000554615 BCO1Q9HAY6 547 aa3.01□□□□□ -1.93
SEC23A-207ENST00000554615 ZNF304Q9HCX3 659 aa3.01□□□□□ -1.93
SEC23A-207ENST00000554615 TMEM138Q9NPI0 162 aa3.01□□□□□ -1.93
SEC23A-207ENST00000554615 GPR160Q9UJ42 338 aa3.01□□□□□ -1.93
SEC23A-207ENST00000554615 CD207Q9UJ71 328 aa3.01□□□□□ -1.93
SEC23A-207ENST00000554615 MRPS33Q9Y291 106 aaKnown RBP3.01□□□□□ -1.93
SEC23A-207ENST00000554615 WIPI2Q9Y4P8 454 aa3.01□□□□□ -1.93
SEC23A-207ENST00000554615 A0A0B4J203 849 aa3□□□□□ -1.93
SEC23A-207ENST00000554615 PRSS46E5RG02 174 aa3□□□□□ -1.93
SEC23A-207ENST00000554615 CYTIPO60759 359 aa3□□□□□ -1.93
SEC23A-207ENST00000554615 SLC25A12O75746 678 aa3□□□□□ -1.93
SEC23A-207ENST00000554615 ATG12O94817 140 aa3□□□□□ -1.93
SEC23A-207ENST00000554615 RENP00797 406 aa3□□□□□ -1.93
SEC23A-207ENST00000554615 CSTAP01040 98 aa3□□□□□ -1.93
SEC23A-207ENST00000554615 CD3GP09693 182 aa3□□□□□ -1.93
SEC23A-207ENST00000554615 DANCRP0C864 163 aa3□□□□□ -1.93
SEC23A-207ENST00000554615 HSMCR30P0CW71 290 aa3□□□□□ -1.93
SEC23A-207ENST00000554615 C8orf89P0DMQ9 161 aa3□□□□□ -1.93
SEC23A-207ENST00000554615 TUBG1P23258 451 aa3□□□□□ -1.93
SEC23A-207ENST00000554615 OPRM1P35372 400 aa3□□□□□ -1.93
SEC23A-207ENST00000554615 HCCSP53701 268 aa3□□□□□ -1.93
SEC23A-207ENST00000554615 CD83Q01151 205 aa3□□□□□ -1.93
SEC23A-207ENST00000554615 PDCD1Q15116 288 aa3□□□□□ -1.93
SEC23A-207ENST00000554615 ZNHIT3Q15649 155 aaPredicted RBP3□□□□□ -1.93
SEC23A-207ENST00000554615 NDUFAF6Q330K2 333 aa3□□□□□ -1.93
SEC23A-207ENST00000554615 C4orf46Q504U0 113 aa3□□□□□ -1.93
SEC23A-207ENST00000554615 ZNF766Q5HY98 468 aa3□□□□□ -1.93
SEC23A-207ENST00000554615 TMEM211Q6ICI0 200 aa3□□□□□ -1.93
SEC23A-207ENST00000554615 FAM180BQ6P0A1 224 aa3□□□□□ -1.93
SEC23A-207ENST00000554615 LRFN4Q6PJG9 635 aa3□□□□□ -1.93
SEC23A-207ENST00000554615 CFAP77Q6ZQR2 320 aa3□□□□□ -1.93
SEC23A-207ENST00000554615 NUDCD2Q8WVJ2 157 aa3□□□□□ -1.93
SEC23A-207ENST00000554615 SPSB1Q96BD6 273 aa3□□□□□ -1.93
SEC23A-207ENST00000554615 MOB3AQ96BX8 217 aa3□□□□□ -1.93
SEC23A-207ENST00000554615 NPAS1Q99742 590 aa3□□□□□ -1.93
SEC23A-207ENST00000554615 GAL3ST1Q99999 423 aa3□□□□□ -1.93
SEC23A-207ENST00000554615 MACROD1Q9BQ69 325 aa3□□□□□ -1.93
SEC23A-207ENST00000554615 PBOV1Q9GZY1 135 aa3□□□□□ -1.93
SEC23A-207ENST00000554615 TUBG2Q9NRH3 451 aa3□□□□□ -1.93
SEC23A-207ENST00000554615 GPN3Q9UHW5 284 aaPredicted RBP3□□□□□ -1.93
SEC23A-207ENST00000554615 PRELID3BQ9Y3B1 194 aa3□□□□□ -1.93
SEC23A-207ENST00000554615 WIF1Q9Y5W5 379 aa3□□□□□ -1.93
SEC23A-207ENST00000554615 IGKV1-27A0A075B6S5 117 aa3□□□□□ -1.93
SEC23A-207ENST00000554615 LRRC3CA6NJW4 275 aa3□□□□□ -1.93
SEC23A-207ENST00000554615 GLOD5A6NK44 160 aa3□□□□□ -1.93
SEC23A-207ENST00000554615 A6NL46 340 aa3□□□□□ -1.93
SEC23A-207ENST00000554615 ANXA2P2A6NMY6 339 aa3□□□□□ -1.93
SEC23A-207ENST00000554615 PMS2P5A8MQ11 134 aa3□□□□□ -1.93
SEC23A-207ENST00000554615 GRXCR1A8MXD5 290 aa3□□□□□ -1.93
SEC23A-207ENST00000554615 ZNF878C9JN71 531 aa3□□□□□ -1.93
SEC23A-207ENST00000554615 G3V3Y1 287 aa3□□□□□ -1.93
SEC23A-207ENST00000554615 H0Y8X5 98 aa3□□□□□ -1.93
SEC23A-207ENST00000554615 SMLR1H3BR10 107 aa3□□□□□ -1.93
SEC23A-207ENST00000554615 KHDRBS3O75525 346 aaKnown RBP3□□□□□ -1.93
SEC23A-207ENST00000554615 VAMP5O95183 116 aa3□□□□□ -1.93
SEC23A-207ENST00000554615 ICAM2P13598 275 aa3□□□□□ -1.93
SEC23A-207ENST00000554615 ABOP16442 354 aa3□□□□□ -1.93
SEC23A-207ENST00000554615 ZNF708P17019 499 aa3□□□□□ -1.93
SEC23A-207ENST00000554615 POU3F2P20265 443 aaPredicted RBP3□□□□□ -1.93
SEC23A-207ENST00000554615 EPHA8P29322 1005 aaPredicted RBP3□□□□□ -1.93
SEC23A-207ENST00000554615 P2RY1P47900 373 aa3□□□□□ -1.93
SEC23A-207ENST00000554615 TMPRSS3P57727 454 aa3□□□□□ -1.93
SEC23A-207ENST00000554615 MLF1P58340 268 aa3□□□□□ -1.93
SEC23A-207ENST00000554615 HNRNPKP61978 463 aaKnown RBP eCLIP3□□□□□ -1.93
SEC23A-207ENST00000554615 HHEXQ03014 270 aa3□□□□□ -1.93
SEC23A-207ENST00000554615 TFF2Q03403 129 aa3□□□□□ -1.93
SEC23A-207ENST00000554615 SHHQ15465 462 aa3□□□□□ -1.93
SEC23A-207ENST00000554615 SLC22A6Q4U2R8 563 aa3□□□□□ -1.93
SEC23A-207ENST00000554615 CCDC157Q569K6 752 aa3□□□□□ -1.93
SEC23A-207ENST00000554615 TMEM69Q5SWH9 247 aa3□□□□□ -1.93
SEC23A-207ENST00000554615 GPR157Q5UAW9 335 aa3□□□□□ -1.93
SEC23A-207ENST00000554615 PTCRAQ6ISU1 281 aaPredicted RBP3□□□□□ -1.93
SEC23A-207ENST00000554615 KCTD18Q6PI47 426 aaPredicted RBP3□□□□□ -1.93
SEC23A-207ENST00000554615 PAPD4Q6PIY7 484 aaKnown RBP3□□□□□ -1.93
SEC23A-207ENST00000554615 KRT77Q7Z794 578 aa3□□□□□ -1.93
SEC23A-207ENST00000554615 FAM185AQ8N0U4 392 aa3□□□□□ -1.93
SEC23A-207ENST00000554615 CLRN3Q8NCR9 226 aa3□□□□□ -1.93
SEC23A-207ENST00000554615 PRR7Q8TB68 274 aa3□□□□□ -1.93
SEC23A-207ENST00000554615 CPT1CQ8TCG5 803 aa3□□□□□ -1.93
SEC23A-207ENST00000554615 CLIP3Q96DZ5 547 aa3□□□□□ -1.93
SEC23A-207ENST00000554615 ZDHHC12Q96GR4 267 aa3□□□□□ -1.93
SEC23A-207ENST00000554615 SLC25A44Q96H78 314 aaPredicted RBP3□□□□□ -1.93
SEC23A-207ENST00000554615 TGM7Q96PF1 710 aa3□□□□□ -1.93
SEC23A-207ENST00000554615 SPRTNQ9H040 489 aaPredicted RBP3□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms