RNA–Protein interactions for RNA: ENST00000554467.5

SHMT2-212, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 3,416 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-212ENST00000554467 FIP1L1Q6UN15 594 aaKnown RBP10.34□□□□□ -0.75
SHMT2-212ENST00000554467 SLC16A13Q7RTY0 426 aa10.34□□□□□ -0.75
SHMT2-212ENST00000554467 CATSPERDQ86XM0 798 aa10.34□□□□□ -0.75
SHMT2-212ENST00000554467 ROBO4Q8WZ75 1007 aa10.34□□□□□ -0.75
SHMT2-212ENST00000554467 MNTQ99583 582 aa10.34□□□□□ -0.75
SHMT2-212ENST00000554467 SLITRK2Q9H156 845 aa10.34□□□□□ -0.75
SHMT2-212ENST00000554467 TAS2R4Q9NYW5 299 aa10.34□□□□□ -0.75
SHMT2-212ENST00000554467 NDRG3Q9UGV2 375 aa10.34□□□□□ -0.75
SHMT2-212ENST00000554467 LHFPL6Q9Y693 200 aa10.34□□□□□ -0.75
SHMT2-212ENST00000554467 DMXL2Q8TDJ6 3036 aa10.34□□□□□ -0.75
SHMT2-212ENST00000554467 CBR3O75828 277 aa10.34□□□□□ -0.75
SHMT2-212ENST00000554467 UBL3O95164 117 aa10.34□□□□□ -0.75
SHMT2-212ENST00000554467 TGM6O95932 706 aa10.34□□□□□ -0.75
SHMT2-212ENST00000554467 SERPINA7P05543 415 aa10.34□□□□□ -0.75
SHMT2-212ENST00000554467 LAP3P28838 519 aa10.34□□□□□ -0.75
SHMT2-212ENST00000554467 RAG2P55895 527 aa10.34□□□□□ -0.75
SHMT2-212ENST00000554467 SLC35A1P78382 337 aa10.34□□□□□ -0.75
SHMT2-212ENST00000554467 KLF9Q13886 244 aaPredicted RBP10.34□□□□□ -0.75
SHMT2-212ENST00000554467 TEX30Q5JUR7 227 aa10.34□□□□□ -0.75
SHMT2-212ENST00000554467 FAM74A1Q5RGS3 127 aa10.34□□□□□ -0.75
SHMT2-212ENST00000554467 TMUB2Q71RG4 321 aa10.34□□□□□ -0.75
SHMT2-212ENST00000554467 LRRC18Q8N456 261 aa10.34□□□□□ -0.75
SHMT2-212ENST00000554467 IL22RA1Q8N6P7 574 aa10.34□□□□□ -0.75
SHMT2-212ENST00000554467 OR56B4Q8NH76 319 aa10.34□□□□□ -0.75
SHMT2-212ENST00000554467 SLC25A43Q8WUT9 341 aaPredicted RBP10.34□□□□□ -0.75
SHMT2-212ENST00000554467 EDARADDQ8WWZ3 215 aa10.34□□□□□ -0.75
SHMT2-212ENST00000554467 ZNF837Q96EG3 531 aaPredicted RBP10.34□□□□□ -0.75
SHMT2-212ENST00000554467 ZPBPQ9BS86 351 aa10.34□□□□□ -0.75
SHMT2-212ENST00000554467 BARX1Q9HBU1 254 aaPredicted RBP10.34□□□□□ -0.75
SHMT2-212ENST00000554467 LRFN1Q9P244 771 aa10.34□□□□□ -0.75
SHMT2-212ENST00000554467 CGGBP1Q9UFW8 167 aaPredicted RBP10.34□□□□□ -0.75
SHMT2-212ENST00000554467 DHDHQ9UQ10 334 aa10.34□□□□□ -0.75
SHMT2-212ENST00000554467 LRRC3CA6NJW4 275 aa10.33□□□□□ -0.76
SHMT2-212ENST00000554467 IGHEP01854 428 aa10.33□□□□□ -0.76
SHMT2-212ENST00000554467 RLN2P04090 185 aa10.33□□□□□ -0.76
SHMT2-212ENST00000554467 RLN1P04808 185 aa10.33□□□□□ -0.76
SHMT2-212ENST00000554467 CELA3AP09093 270 aa10.33□□□□□ -0.76
SHMT2-212ENST00000554467 GDF1P27539 372 aa10.33□□□□□ -0.76
SHMT2-212ENST00000554467 ADH6P28332 368 aa10.33□□□□□ -0.76
SHMT2-212ENST00000554467 S100A11P31949 105 aa10.33□□□□□ -0.76
SHMT2-212ENST00000554467 CD96P40200 585 aa10.33□□□□□ -0.76
SHMT2-212ENST00000554467 RAD52P43351 418 aa10.33□□□□□ -0.76
SHMT2-212ENST00000554467 EFNB2P52799 333 aa10.33□□□□□ -0.76
SHMT2-212ENST00000554467 UBE2MP61081 183 aaKnown RBP10.33□□□□□ -0.76
SHMT2-212ENST00000554467 PITPNAQ00169 270 aa10.33□□□□□ -0.76
SHMT2-212ENST00000554467 SPOCK1Q08629 439 aa10.33□□□□□ -0.76
SHMT2-212ENST00000554467 TMEM69Q5SWH9 247 aa10.33□□□□□ -0.76
SHMT2-212ENST00000554467 RBMS3Q6XE24 437 aaKnown RBP10.33□□□□□ -0.76
SHMT2-212ENST00000554467 OR51D1Q8NGF3 324 aa10.33□□□□□ -0.76
SHMT2-212ENST00000554467 OR5M9Q8NGP3 310 aa10.33□□□□□ -0.76
SHMT2-212ENST00000554467 OR6N1Q8NGY5 312 aa10.33□□□□□ -0.76
SHMT2-212ENST00000554467 SYNPRQ8TBG9 265 aa10.33□□□□□ -0.76
SHMT2-212ENST00000554467 SOX7Q9BT81 388 aa10.33□□□□□ -0.76
SHMT2-212ENST00000554467 DNTTIP1Q9H147 329 aa10.33□□□□□ -0.76
SHMT2-212ENST00000554467 ABRACLQ9P1F3 81 aa10.33□□□□□ -0.76
SHMT2-212ENST00000554467 OR52A1Q9UKL2 312 aa10.33□□□□□ -0.76
SHMT2-212ENST00000554467 EDARQ9UNE0 448 aa10.33□□□□□ -0.76
SHMT2-212ENST00000554467 FREM1Q5H8C1 2179 aa10.33□□□□□ -0.76
SHMT2-212ENST00000554467 LOC107986453A0A1B0GWG9 222 aa10.33□□□□□ -0.76
SHMT2-212ENST00000554467 DCDC2BA2VCK2 349 aa10.33□□□□□ -0.76
SHMT2-212ENST00000554467 SUCLG1P53597 346 aaKnown RBP10.33□□□□□ -0.76
SHMT2-212ENST00000554467 SRSF6Q13247 344 aaKnown RBP10.33□□□□□ -0.76
SHMT2-212ENST00000554467 C2orf68Q2NKX9 166 aa10.33□□□□□ -0.76
SHMT2-212ENST00000554467 THEM4Q5T1C6 240 aa10.33□□□□□ -0.76
SHMT2-212ENST00000554467 CBLN2Q8IUK8 224 aa10.33□□□□□ -0.76
SHMT2-212ENST00000554467 SUMF1Q8NBK3 374 aa10.33□□□□□ -0.76
SHMT2-212ENST00000554467 OR13C3Q8NGS6 347 aa10.33□□□□□ -0.76
SHMT2-212ENST00000554467 HAVCR2Q8TDQ0 301 aa10.33□□□□□ -0.76
SHMT2-212ENST00000554467 ASB5Q8WWX0 329 aa10.33□□□□□ -0.76
SHMT2-212ENST00000554467 SGCZQ96LD1 299 aa10.33□□□□□ -0.76
SHMT2-212ENST00000554467 MGAT4CQ9UBM8 478 aa10.33□□□□□ -0.76
SHMT2-212ENST00000554467 GDF2Q9UK05 429 aaPredicted RBP10.33□□□□□ -0.76
SHMT2-212ENST00000554467 TRBV5-7A0A0A0MS05 114 aa10.33□□□□□ -0.76
SHMT2-212ENST00000554467 NPIPA2E9PIF3 369 aa10.33□□□□□ -0.76
SHMT2-212ENST00000554467 NPIPA3F8WFD2 350 aa10.33□□□□□ -0.76
SHMT2-212ENST00000554467 GPR31O00270 319 aa10.33□□□□□ -0.76
SHMT2-212ENST00000554467 ARPC5O15511 151 aa10.33□□□□□ -0.76
SHMT2-212ENST00000554467 GALR2O43603 387 aaPredicted RBP10.33□□□□□ -0.76
SHMT2-212ENST00000554467 SSX5O60225 188 aa10.33□□□□□ -0.76
SHMT2-212ENST00000554467 PEX14O75381 377 aa10.33□□□□□ -0.76
SHMT2-212ENST00000554467 ITGA5P08648 1049 aa10.33□□□□□ -0.76
SHMT2-212ENST00000554467 SPP1P10451 314 aa10.33□□□□□ -0.76
SHMT2-212ENST00000554467 MAPK3P27361 379 aaPredicted RBP10.33□□□□□ -0.76
SHMT2-212ENST00000554467 SRYQ05066 204 aa10.33□□□□□ -0.76
SHMT2-212ENST00000554467 RBMS2Q15434 407 aaKnown RBP10.33□□□□□ -0.76
SHMT2-212ENST00000554467 LDLRAD3Q86YD5 345 aa10.33□□□□□ -0.76
SHMT2-212ENST00000554467 PDZD9Q8IXQ8 264 aa10.33□□□□□ -0.76
SHMT2-212ENST00000554467 ZFP82Q8N141 532 aa10.33□□□□□ -0.76
SHMT2-212ENST00000554467 MEIOBQ8N635 442 aa10.33□□□□□ -0.76
SHMT2-212ENST00000554467 OR8S1Q8NH09 359 aa10.33□□□□□ -0.76
SHMT2-212ENST00000554467 G6PC2Q9NQR9 355 aa10.33□□□□□ -0.76
SHMT2-212ENST00000554467 R4GMQ9 66 aa10.33□□□□□ -0.76
SHMT2-212ENST00000554467 CEP295Q9C0D2 2601 aa10.33□□□□□ -0.76
SHMT2-212ENST00000554467 RAB40ALP0C0E4 278 aa10.32□□□□□ -0.76
SHMT2-212ENST00000554467 ANXA7P20073 488 aaKnown RBP10.32□□□□□ -0.76
SHMT2-212ENST00000554467 DCTDP32321 178 aa10.32□□□□□ -0.76
SHMT2-212ENST00000554467 UBE2NLQ5JXB2 153 aa10.32□□□□□ -0.76
SHMT2-212ENST00000554467 CDV3Q9UKY7 258 aaKnown RBP10.32□□□□□ -0.76
SHMT2-212ENST00000554467 A0A087WZY1 265 aa10.32□□□□□ -0.76
SHMT2-212ENST00000554467 FAM166BA8MTA8 275 aa10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms