RNA–Protein interactions for RNA: ENST00000553998.5

ABCD4-220, Transcript of ATP binding cassette subfamily D member 4, humanhuman

TSL 3

Gene ABCD4, Length 478 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD4-220ENST00000553998 ATP6V1E1P36543 226 aa6.55□□□□□ -1.36
ABCD4-220ENST00000553998 NAA10P41227 235 aaPredicted RBP6.55□□□□□ -1.36
ABCD4-220ENST00000553998 RAD52P43351 418 aa6.55□□□□□ -1.36
ABCD4-220ENST00000553998 SLC15A1P46059 708 aa6.55□□□□□ -1.36
ABCD4-220ENST00000553998 MTNR1AP48039 350 aa6.55□□□□□ -1.36
ABCD4-220ENST00000553998 RGS6P49758 472 aa6.55□□□□□ -1.36
ABCD4-220ENST00000553998 RPS23P62266 143 aaKnown RBP6.55□□□□□ -1.36
ABCD4-220ENST00000553998 GRB2P62993 217 aaKnown RBP6.55□□□□□ -1.36
ABCD4-220ENST00000553998 ACTC1P68032 377 aa6.55□□□□□ -1.36
ABCD4-220ENST00000553998 ACTA1P68133 377 aa6.55□□□□□ -1.36
ABCD4-220ENST00000553998 IL13RA1P78552 427 aa6.55□□□□□ -1.36
ABCD4-220ENST00000553998 GALK2Q01415 458 aa6.55□□□□□ -1.36
ABCD4-220ENST00000553998 SNTB2Q13425 540 aaKnown RBP6.55□□□□□ -1.36
ABCD4-220ENST00000553998 EIF2B1Q14232 305 aaKnown RBP6.55□□□□□ -1.36
ABCD4-220ENST00000553998 SNCBQ16143 134 aa6.55□□□□□ -1.36
ABCD4-220ENST00000553998 KRTAP27-1Q3LI81 207 aa6.55□□□□□ -1.36
ABCD4-220ENST00000553998 OTPQ5XKR4 325 aa6.55□□□□□ -1.36
ABCD4-220ENST00000553998 HIST2H2BDQ6DRA6 164 aa6.55□□□□□ -1.36
ABCD4-220ENST00000553998 CORO6Q6QEF8 472 aa6.55□□□□□ -1.36
ABCD4-220ENST00000553998 DEGS2Q6QHC5 323 aa6.55□□□□□ -1.36
ABCD4-220ENST00000553998 CFAP77Q6ZQR2 320 aa6.55□□□□□ -1.36
ABCD4-220ENST00000553998 DOK3Q7L591 496 aa6.55□□□□□ -1.36
ABCD4-220ENST00000553998 EGFL6Q8IUX8 553 aa6.55□□□□□ -1.36
ABCD4-220ENST00000553998 BPIFB2Q8N4F0 458 aa6.55□□□□□ -1.36
ABCD4-220ENST00000553998 OR2T27Q8NH04 317 aa6.55□□□□□ -1.36
ABCD4-220ENST00000553998 ST7LQ8TDW4 575 aa6.55□□□□□ -1.36
ABCD4-220ENST00000553998 FBLIM1Q8WUP2 373 aa6.55□□□□□ -1.36
ABCD4-220ENST00000553998 RNF133Q8WVZ7 376 aa6.55□□□□□ -1.36
ABCD4-220ENST00000553998 APH1BQ8WW43 257 aa6.55□□□□□ -1.36
ABCD4-220ENST00000553998 SLAMF6Q96DU3 332 aa6.55□□□□□ -1.36
ABCD4-220ENST00000553998 MAP6Q96JE9 813 aa6.55□□□□□ -1.36
ABCD4-220ENST00000553998 COG8Q96MW5 612 aa6.55□□□□□ -1.36
ABCD4-220ENST00000553998 MYCBPQ99417 103 aaPredicted RBP6.55□□□□□ -1.36
ABCD4-220ENST00000553998 ATF6BQ99941 703 aa6.55□□□□□ -1.36
ABCD4-220ENST00000553998 ABHD6Q9BV23 337 aa6.55□□□□□ -1.36
ABCD4-220ENST00000553998 ANKRD60Q9BZ19 345 aa6.55□□□□□ -1.36
ABCD4-220ENST00000553998 BCL2L14Q9BZR8 327 aa6.55□□□□□ -1.36
ABCD4-220ENST00000553998 ZNF665Q9H7R5 613 aa6.55□□□□□ -1.36
ABCD4-220ENST00000553998 NIPAL2Q9H841 368 aa6.55□□□□□ -1.36
ABCD4-220ENST00000553998 ELOVL3Q9HB03 270 aa6.55□□□□□ -1.36
ABCD4-220ENST00000553998 ADGRL4Q9HBW9 690 aa6.55□□□□□ -1.36
ABCD4-220ENST00000553998 PNRC2Q9NPJ4 139 aaKnown RBP6.55□□□□□ -1.36
ABCD4-220ENST00000553998 TBCCD1Q9NVR7 557 aa6.55□□□□□ -1.36
ABCD4-220ENST00000553998 MRPS18AQ9NVS2 196 aaKnown RBP6.55□□□□□ -1.36
ABCD4-220ENST00000553998 LAMP5Q9UJQ1 280 aa6.55□□□□□ -1.36
ABCD4-220ENST00000553998 NBEAL2Q6ZNJ1 2754 aa6.55□□□□□ -1.36
ABCD4-220ENST00000553998 ZNF670-ZNF695F2Z2N8 137 aa6.54□□□□□ -1.36
ABCD4-220ENST00000553998 H3BSA7 217 aa6.54□□□□□ -1.36
ABCD4-220ENST00000553998 PPIHO43447 177 aaKnown RBP6.54□□□□□ -1.36
ABCD4-220ENST00000553998 ZNF254O75437 659 aa6.54□□□□□ -1.36
ABCD4-220ENST00000553998 WBP4O75554 376 aaKnown RBP6.54□□□□□ -1.36
ABCD4-220ENST00000553998 NCR1O76036 304 aa6.54□□□□□ -1.36
ABCD4-220ENST00000553998 CLIC3O95833 236 aa6.54□□□□□ -1.36
ABCD4-220ENST00000553998 FADS2O95864 444 aaKnown RBP6.54□□□□□ -1.36
ABCD4-220ENST00000553998 RNASE1P07998 156 aaKnown RBP6.54□□□□□ -1.36
ABCD4-220ENST00000553998 DBTP11182 482 aaKnown RBP6.54□□□□□ -1.36
ABCD4-220ENST00000553998 GCH1P30793 250 aa6.54□□□□□ -1.36
ABCD4-220ENST00000553998 OTX1P32242 354 aaPredicted RBP6.54□□□□□ -1.36
ABCD4-220ENST00000553998 DCTDP32321 178 aa6.54□□□□□ -1.36
ABCD4-220ENST00000553998 OPRL1P41146 370 aa6.54□□□□□ -1.36
ABCD4-220ENST00000553998 RPS27P42677 84 aaKnown RBP6.54□□□□□ -1.36
ABCD4-220ENST00000553998 ALDH3B1P43353 468 aa6.54□□□□□ -1.36
ABCD4-220ENST00000553998 UCP2P55851 309 aa6.54□□□□□ -1.36
ABCD4-220ENST00000553998 TPTEP56180 551 aa6.54□□□□□ -1.36
ABCD4-220ENST00000553998 CXCR4P61073 352 aa6.54□□□□□ -1.36
ABCD4-220ENST00000553998 CSNK2BP67870 215 aa6.54□□□□□ -1.36
ABCD4-220ENST00000553998 ROM1Q03395 351 aa6.54□□□□□ -1.36
ABCD4-220ENST00000553998 ZNF91Q05481 1191 aa6.54□□□□□ -1.36
ABCD4-220ENST00000553998 EGR3Q06889 387 aa6.54□□□□□ -1.36
ABCD4-220ENST00000553998 RAB40BQ12829 278 aa6.54□□□□□ -1.36
ABCD4-220ENST00000553998 TAF13Q15543 124 aa6.54□□□□□ -1.36
ABCD4-220ENST00000553998 KLHL22Q53GT1 634 aa6.54□□□□□ -1.36
ABCD4-220ENST00000553998 KRT80Q6KB66 452 aa6.54□□□□□ -1.36
ABCD4-220ENST00000553998 KCTD18Q6PI47 426 aaPredicted RBP6.54□□□□□ -1.36
ABCD4-220ENST00000553998 COLCA1Q6ZS62 124 aa6.54□□□□□ -1.36
ABCD4-220ENST00000553998 SLC35F2Q8IXU6 374 aa6.54□□□□□ -1.36
ABCD4-220ENST00000553998 OR51G2Q8NGK0 314 aa6.54□□□□□ -1.36
ABCD4-220ENST00000553998 OR10S1Q8NGN2 331 aa6.54□□□□□ -1.36
ABCD4-220ENST00000553998 THEM6Q8WUY1 208 aa6.54□□□□□ -1.36
ABCD4-220ENST00000553998 SPTSSAQ969W0 71 aa6.54□□□□□ -1.36
ABCD4-220ENST00000553998 RNFT2Q96EX2 444 aa6.54□□□□□ -1.36
ABCD4-220ENST00000553998 C4orf45Q96LM5 186 aa6.54□□□□□ -1.36
ABCD4-220ENST00000553998 C1orf147Q96MC9 270 aaPredicted RBP6.54□□□□□ -1.36
ABCD4-220ENST00000553998 ZNF184Q99676 751 aaPredicted RBP6.54□□□□□ -1.36
ABCD4-220ENST00000553998 KCNJ15Q99712 375 aa6.54□□□□□ -1.36
ABCD4-220ENST00000553998 COPS4Q9BT78 406 aa6.54□□□□□ -1.36
ABCD4-220ENST00000553998 Q9H521 79 aa6.54□□□□□ -1.36
ABCD4-220ENST00000553998 NARFLQ9H6Q4 476 aa6.54□□□□□ -1.36
ABCD4-220ENST00000553998 SP140LQ9H930 580 aa6.54□□□□□ -1.36
ABCD4-220ENST00000553998 INPP5EQ9NRR6 644 aa6.54□□□□□ -1.36
ABCD4-220ENST00000553998 NKIRAS2Q9NYR9 191 aa6.54□□□□□ -1.36
ABCD4-220ENST00000553998 RAB26Q9ULW5 256 aa6.54□□□□□ -1.36
ABCD4-220ENST00000553998 EXOGQ9Y2C4 368 aaKnown RBP6.54□□□□□ -1.36
ABCD4-220ENST00000553998 PPIAL4AQ9Y536 164 aa6.54□□□□□ -1.36
ABCD4-220ENST00000553998 MMP24Q9Y5R2 645 aa6.54□□□□□ -1.36
ABCD4-220ENST00000553998 EFCAB10A6NFE3 127 aa6.53□□□□□ -1.36
ABCD4-220ENST00000553998 ACOD1A6NK06 481 aa6.53□□□□□ -1.36
ABCD4-220ENST00000553998 J3QRE1 110 aa6.53□□□□□ -1.36
ABCD4-220ENST00000553998 M0R135 149 aa6.53□□□□□ -1.36
ABCD4-220ENST00000553998 SULT1C4O75897 302 aa6.53□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms