RNA–Protein interactions for RNA: ENST00000553947.1

AL049839.2-201, humanhuman

APPRIS P1 TSL 2 BASIC

Gene AL049839.2, Length 3,067 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AL049839.2-201ENST00000553947 SOX1O00570 391 aaPredicted RBP8.06□□□□□ -1.12
AL049839.2-201ENST00000553947 ADAM10O14672 748 aa8.06□□□□□ -1.12
AL049839.2-201ENST00000553947 ZFPL1O95159 310 aa8.06□□□□□ -1.12
AL049839.2-201ENST00000553947 TIAF1O95411 115 aa8.06□□□□□ -1.12
AL049839.2-201ENST00000553947 BGLAPP02818 100 aa8.06□□□□□ -1.12
AL049839.2-201ENST00000553947 HOXB5P09067 269 aa8.06□□□□□ -1.12
AL049839.2-201ENST00000553947 HOXA5P20719 270 aa8.06□□□□□ -1.12
AL049839.2-201ENST00000553947 CD34P28906 385 aa8.06□□□□□ -1.12
AL049839.2-201ENST00000553947 SLC25A1P53007 311 aa8.06□□□□□ -1.12
AL049839.2-201ENST00000553947 NUTF2P61970 127 aaKnown RBP8.06□□□□□ -1.12
AL049839.2-201ENST00000553947 ZNF345Q14585 488 aa8.06□□□□□ -1.12
AL049839.2-201ENST00000553947 UNQ9370/PRO34162Q6UXP9 181 aa8.06□□□□□ -1.12
AL049839.2-201ENST00000553947 GLB1L2Q8IW92 636 aa8.06□□□□□ -1.12
AL049839.2-201ENST00000553947 ZNF441Q8N8Z8 693 aa8.06□□□□□ -1.12
AL049839.2-201ENST00000553947 ACBD4Q8NC06 268 aa8.06□□□□□ -1.12
AL049839.2-201ENST00000553947 OR5AP2Q8NGF4 316 aa8.06□□□□□ -1.12
AL049839.2-201ENST00000553947 WDR76Q9H967 626 aa8.06□□□□□ -1.12
AL049839.2-201ENST00000553947 BCO1Q9HAY6 547 aa8.06□□□□□ -1.12
AL049839.2-201ENST00000553947 NOX4Q9NPH5 578 aa8.06□□□□□ -1.12
AL049839.2-201ENST00000553947 GRHPRQ9UBQ7 328 aa8.06□□□□□ -1.12
AL049839.2-201ENST00000553947 MRM2Q9UI43 246 aaKnown RBP8.06□□□□□ -1.12
AL049839.2-201ENST00000553947 GDF2Q9UK05 429 aaPredicted RBP8.06□□□□□ -1.12
AL049839.2-201ENST00000553947 FBXO4Q9UKT5 387 aa8.06□□□□□ -1.12
AL049839.2-201ENST00000553947 ZDHHC8Q9ULC8 765 aa8.06□□□□□ -1.12
AL049839.2-201ENST00000553947 TP53TG5Q9Y2B4 290 aa8.06□□□□□ -1.12
AL049839.2-201ENST00000553947 COL6A3P12111 3177 aa8.06□□□□□ -1.12
AL049839.2-201ENST00000553947 CPED1A4D0V7 1026 aa8.06□□□□□ -1.12
AL049839.2-201ENST00000553947 RNF222A6NCQ9 220 aa8.06□□□□□ -1.12
AL049839.2-201ENST00000553947 EEF1E1-BLOC1S5C9J1V9 151 aa8.06□□□□□ -1.12
AL049839.2-201ENST00000553947 ZNF208O43345 1280 aa8.06□□□□□ -1.12
AL049839.2-201ENST00000553947 F10P00742 488 aa8.06□□□□□ -1.12
AL049839.2-201ENST00000553947 PLGP00747 810 aaPredicted RBP8.06□□□□□ -1.12
AL049839.2-201ENST00000553947 OR4E1P0C645 316 aa8.06□□□□□ -1.12
AL049839.2-201ENST00000553947 PGAM2P15259 253 aa8.06□□□□□ -1.12
AL049839.2-201ENST00000553947 RAB4AP20338 218 aa8.06□□□□□ -1.12
AL049839.2-201ENST00000553947 CXCR1P25024 350 aa8.06□□□□□ -1.12
AL049839.2-201ENST00000553947 CXCL12P48061 93 aa8.06□□□□□ -1.12
AL049839.2-201ENST00000553947 TAS2R20P59543 309 aa8.06□□□□□ -1.12
AL049839.2-201ENST00000553947 DCAF7P61962 342 aa8.06□□□□□ -1.12
AL049839.2-201ENST00000553947 PPA1Q15181 289 aa8.06□□□□□ -1.12
AL049839.2-201ENST00000553947 STPG1Q5TH74 334 aa8.06□□□□□ -1.12
AL049839.2-201ENST00000553947 OR2A2Q6IF42 318 aa8.06□□□□□ -1.12
AL049839.2-201ENST00000553947 OIT3Q8WWZ8 545 aa8.06□□□□□ -1.12
AL049839.2-201ENST00000553947 CLDN23Q96B33 292 aa8.06□□□□□ -1.12
AL049839.2-201ENST00000553947 SLC25A36Q96CQ1 311 aa8.06□□□□□ -1.12
AL049839.2-201ENST00000553947 SHDQ96IW2 340 aa8.06□□□□□ -1.12
AL049839.2-201ENST00000553947 FOXN4Q96NZ1 517 aa8.06□□□□□ -1.12
AL049839.2-201ENST00000553947 TBL1XR1Q9BZK7 514 aa8.06□□□□□ -1.12
AL049839.2-201ENST00000553947 DUSP15Q9H1R2 295 aaPredicted RBP8.06□□□□□ -1.12
AL049839.2-201ENST00000553947 OPN3Q9H1Y3 402 aaPredicted RBP8.06□□□□□ -1.12
AL049839.2-201ENST00000553947 SYT4Q9H2B2 425 aa8.06□□□□□ -1.12
AL049839.2-201ENST00000553947 CRLF2Q9HC73 371 aa8.06□□□□□ -1.12
AL049839.2-201ENST00000553947 DNAJB11Q9UBS4 358 aa8.06□□□□□ -1.12
AL049839.2-201ENST00000553947 CDV3Q9UKY7 258 aaKnown RBP8.06□□□□□ -1.12
AL049839.2-201ENST00000553947 C2orf72A6NCS6 295 aa8.06□□□□□ -1.12
AL049839.2-201ENST00000553947 ZNF726A6NNF4 738 aa8.06□□□□□ -1.12
AL049839.2-201ENST00000553947 FGF16O43320 207 aa8.06□□□□□ -1.12
AL049839.2-201ENST00000553947 UPK3AO75631 287 aa8.06□□□□□ -1.12
AL049839.2-201ENST00000553947 VAMP1P23763 118 aa8.06□□□□□ -1.12
AL049839.2-201ENST00000553947 CAV2P51636 162 aa8.06□□□□□ -1.12
AL049839.2-201ENST00000553947 NHLH2Q02577 135 aa8.06□□□□□ -1.12
AL049839.2-201ENST00000553947 FOXO1Q12778 655 aa8.06□□□□□ -1.12
AL049839.2-201ENST00000553947 HYAL4Q2M3T9 481 aa8.06□□□□□ -1.12
AL049839.2-201ENST00000553947 SCGB2B2Q4G0G5 96 aa8.06□□□□□ -1.12
AL049839.2-201ENST00000553947 FAM199XQ6PEV8 388 aaPredicted RBP8.06□□□□□ -1.12
AL049839.2-201ENST00000553947 WDR74Q6RFH5 385 aaPredicted RBP8.06□□□□□ -1.12
AL049839.2-201ENST00000553947 DHRS11Q6UWP2 260 aa8.06□□□□□ -1.12
AL049839.2-201ENST00000553947 SLC16A9Q7RTY1 509 aa8.06□□□□□ -1.12
AL049839.2-201ENST00000553947 PPP1R3BQ86XI6 285 aa8.06□□□□□ -1.12
AL049839.2-201ENST00000553947 OR56B1Q8NGI3 324 aa8.06□□□□□ -1.12
AL049839.2-201ENST00000553947 STT3BQ8TCJ2 826 aa8.06□□□□□ -1.12
AL049839.2-201ENST00000553947 RPS4Y2Q8TD47 263 aa8.06□□□□□ -1.12
AL049839.2-201ENST00000553947 THAP3Q8WTV1 239 aaPredicted RBP8.06□□□□□ -1.12
AL049839.2-201ENST00000553947 SECTM1Q8WVN6 248 aa8.06□□□□□ -1.12
AL049839.2-201ENST00000553947 AMELYQ99218 206 aa8.06□□□□□ -1.12
AL049839.2-201ENST00000553947 UTP23Q9BRU9 249 aaKnown RBP8.06□□□□□ -1.12
AL049839.2-201ENST00000553947 SIRT7Q9NRC8 400 aa8.06□□□□□ -1.12
AL049839.2-201ENST00000553947 COPS7AQ9UBW8 275 aa8.06□□□□□ -1.12
AL049839.2-201ENST00000553947 C13orf42A0A1B0GVH6 325 aa8.05□□□□□ -1.12
AL049839.2-201ENST00000553947 A0A1W2PPE2 198 aa8.05□□□□□ -1.12
AL049839.2-201ENST00000553947 A0A1W2PQD3 144 aa8.05□□□□□ -1.12
AL049839.2-201ENST00000553947 H3BSH0 61 aa8.05□□□□□ -1.12
AL049839.2-201ENST00000553947 CDC40O60508 579 aaKnown RBP eCLIP8.05□□□□□ -1.12
AL049839.2-201ENST00000553947 SERPINA5P05154 406 aa8.05□□□□□ -1.12
AL049839.2-201ENST00000553947 CD79AP11912 226 aa8.05□□□□□ -1.12
AL049839.2-201ENST00000553947 SLC6A8P48029 635 aa8.05□□□□□ -1.12
AL049839.2-201ENST00000553947 LSM6P62312 80 aaKnown RBP8.05□□□□□ -1.12
AL049839.2-201ENST00000553947 LY6G6FQ5SQ64 297 aa8.05□□□□□ -1.12
AL049839.2-201ENST00000553947 LIPNQ5VXI9 398 aa8.05□□□□□ -1.12
AL049839.2-201ENST00000553947 ZNF385CQ66K41 422 aaPredicted RBP8.05□□□□□ -1.12
AL049839.2-201ENST00000553947 ZNF529Q6P280 563 aa8.05□□□□□ -1.12
AL049839.2-201ENST00000553947 CDC20BQ86Y33 519 aa8.05□□□□□ -1.12
AL049839.2-201ENST00000553947 OR6N1Q8NGY5 312 aa8.05□□□□□ -1.12
AL049839.2-201ENST00000553947 CD300LFQ8TDQ1 290 aa8.05□□□□□ -1.12
AL049839.2-201ENST00000553947 DCUN1D4Q92564 292 aa8.05□□□□□ -1.12
AL049839.2-201ENST00000553947 KIRREL1Q96J84 757 aa8.05□□□□□ -1.12
AL049839.2-201ENST00000553947 ADAD1Q96M93 576 aaKnown RBP8.05□□□□□ -1.12
AL049839.2-201ENST00000553947 OR11A1Q9GZK7 315 aa8.05□□□□□ -1.12
AL049839.2-201ENST00000553947 ATG5Q9H1Y0 275 aa8.05□□□□□ -1.12
AL049839.2-201ENST00000553947 FKRPQ9H9S5 495 aa8.05□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms