RNA–Protein interactions for RNA: ENST00000553656.5

TUBB3-202, Transcript of tubulin beta 3 class III, humanhuman

TSL 4

Gene TUBB3, Length 550 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-202ENST00000553656 J3QLW9 94 aa11.81□□□□□ -0.52
TUBB3-202ENST00000553656 CSF3P09919 207 aa11.81□□□□□ -0.52
TUBB3-202ENST00000553656 ZNF19P17023 458 aa11.81□□□□□ -0.52
TUBB3-202ENST00000553656 DDOSTP39656 456 aa11.81□□□□□ -0.52
TUBB3-202ENST00000553656 PRSS12P56730 875 aa11.81□□□□□ -0.52
TUBB3-202ENST00000553656 MFGE8Q08431 387 aaPredicted RBP11.81□□□□□ -0.52
TUBB3-202ENST00000553656 CARTPTQ16568 116 aa11.81□□□□□ -0.52
TUBB3-202ENST00000553656 TSTQ16762 297 aaKnown RBP11.81□□□□□ -0.52
TUBB3-202ENST00000553656 TMEM255AQ5JRV8 349 aa11.81□□□□□ -0.52
TUBB3-202ENST00000553656 FAM209AQ5JX71 171 aa11.81□□□□□ -0.52
TUBB3-202ENST00000553656 ZNF684Q5T5D7 378 aa11.81□□□□□ -0.52
TUBB3-202ENST00000553656 CLEC2AQ6UVW9 174 aa11.81□□□□□ -0.52
TUBB3-202ENST00000553656 STX19Q8N4C7 294 aa11.81□□□□□ -0.52
TUBB3-202ENST00000553656 FTMTQ8N4E7 242 aa11.81□□□□□ -0.52
TUBB3-202ENST00000553656 OR2Z1Q8NG97 314 aa11.81□□□□□ -0.52
TUBB3-202ENST00000553656 OR56B2PQ8NGI1 322 aa11.81□□□□□ -0.52
TUBB3-202ENST00000553656 OR13G1Q8NGZ3 307 aa11.81□□□□□ -0.52
TUBB3-202ENST00000553656 GTF3AQ92664 365 aaKnown RBP11.81□□□□□ -0.52
TUBB3-202ENST00000553656 SPSB4Q96A44 273 aa11.81□□□□□ -0.52
TUBB3-202ENST00000553656 SGK3Q96BR1 496 aa11.81□□□□□ -0.52
TUBB3-202ENST00000553656 TMEM80Q96HE8 168 aa11.81□□□□□ -0.52
TUBB3-202ENST00000553656 C4orf36Q96KX1 117 aa11.81□□□□□ -0.52
TUBB3-202ENST00000553656 SIGLEC11Q96RL6 698 aa11.81□□□□□ -0.52
TUBB3-202ENST00000553656 SLC22A4Q9H015 551 aa11.81□□□□□ -0.52
TUBB3-202ENST00000553656 ACOXLQ9NUZ1 547 aa11.81□□□□□ -0.52
TUBB3-202ENST00000553656 TMEM100Q9NV29 134 aa11.81□□□□□ -0.52
TUBB3-202ENST00000553656 ERVK13-1Q9NX77 482 aa11.81□□□□□ -0.52
TUBB3-202ENST00000553656 NKIRAS2Q9NYR9 191 aa11.81□□□□□ -0.52
TUBB3-202ENST00000553656 CNOT2Q9NZN8 540 aaKnown RBP11.81□□□□□ -0.52
TUBB3-202ENST00000553656 OR52A1Q9UKL2 312 aa11.81□□□□□ -0.52
TUBB3-202ENST00000553656 EXOSC1Q9Y3B2 195 aaKnown RBP11.81□□□□□ -0.52
TUBB3-202ENST00000553656 ARFGEF3Q5TH69 2177 aa11.8□□□□□ -0.52
TUBB3-202ENST00000553656 A0A0U1RQV5 110 aa11.8□□□□□ -0.52
TUBB3-202ENST00000553656 hCG_38984A0A1B0GV85 526 aa11.8□□□□□ -0.52
TUBB3-202ENST00000553656 XPNPEP2O43895 674 aa11.8□□□□□ -0.52
TUBB3-202ENST00000553656 LY6HO94772 140 aa11.8□□□□□ -0.52
TUBB3-202ENST00000553656 PNPP00491 289 aa11.8□□□□□ -0.52
TUBB3-202ENST00000553656 IGHV1-46P01743 117 aa11.8□□□□□ -0.52
TUBB3-202ENST00000553656 PIPP12273 146 aaPredicted RBP11.8□□□□□ -0.52
TUBB3-202ENST00000553656 DAOP14920 347 aa11.8□□□□□ -0.52
TUBB3-202ENST00000553656 MAGEB1P43366 347 aa11.8□□□□□ -0.52
TUBB3-202ENST00000553656 OR12D2P58182 307 aa11.8□□□□□ -0.52
TUBB3-202ENST00000553656 DSCR9P59020 149 aa11.8□□□□□ -0.52
TUBB3-202ENST00000553656 CCL8P80075 99 aa11.8□□□□□ -0.52
TUBB3-202ENST00000553656 TNFAIP6P98066 277 aaPredicted RBP11.8□□□□□ -0.52
TUBB3-202ENST00000553656 FAM3AP98173 230 aa11.8□□□□□ -0.52
TUBB3-202ENST00000553656 MRPL28Q13084 256 aaKnown RBP11.8□□□□□ -0.52
TUBB3-202ENST00000553656 CLEC12BQ2HXU8 276 aa11.8□□□□□ -0.52
TUBB3-202ENST00000553656 C6orf141Q5SZD1 244 aa11.8□□□□□ -0.52
TUBB3-202ENST00000553656 TMPRSS11AQ6ZMR5 421 aa11.8□□□□□ -0.52
TUBB3-202ENST00000553656 AHSA2Q719I0 299 aa11.8□□□□□ -0.52
TUBB3-202ENST00000553656 EGFL6Q8IUX8 553 aa11.8□□□□□ -0.52
TUBB3-202ENST00000553656 SYS1Q8N2H4 156 aa11.8□□□□□ -0.52
TUBB3-202ENST00000553656 ZNF540Q8NDQ6 660 aa11.8□□□□□ -0.52
TUBB3-202ENST00000553656 CSNK2A3Q8NEV1 391 aa11.8□□□□□ -0.52
TUBB3-202ENST00000553656 UBASH3BQ8TF42 649 aa11.8□□□□□ -0.52
TUBB3-202ENST00000553656 GGHQ92820 318 aa11.8□□□□□ -0.52
TUBB3-202ENST00000553656 ELMOD3Q96FG2 381 aa11.8□□□□□ -0.52
TUBB3-202ENST00000553656 JAM3Q9BX67 310 aa11.8□□□□□ -0.52
TUBB3-202ENST00000553656 SAP30LQ9HAJ7 183 aa11.8□□□□□ -0.52
TUBB3-202ENST00000553656 PLCXD1Q9NUJ7 323 aa11.8□□□□□ -0.52
TUBB3-202ENST00000553656 MRPL15Q9P015 296 aaKnown RBP11.8□□□□□ -0.52
TUBB3-202ENST00000553656 ZNF319Q9P2F9 582 aa11.8□□□□□ -0.52
TUBB3-202ENST00000553656 PSORS1C1Q9UIG5 152 aa11.8□□□□□ -0.52
TUBB3-202ENST00000553656 DIMT1Q9UNQ2 313 aaKnown RBP11.8□□□□□ -0.52
TUBB3-202ENST00000553656 SLC1A7O00341 560 aa11.79□□□□□ -0.52
TUBB3-202ENST00000553656 SRSF10O75494 262 aaKnown RBP11.79□□□□□ -0.52
TUBB3-202ENST00000553656 MTRF1O75570 445 aaKnown RBP11.79□□□□□ -0.52
TUBB3-202ENST00000553656 ADH4P08319 380 aa11.79□□□□□ -0.52
TUBB3-202ENST00000553656 HTR1AP08908 422 aa11.79□□□□□ -0.52
TUBB3-202ENST00000553656 ANOS1P23352 680 aa11.79□□□□□ -0.52
TUBB3-202ENST00000553656 GNALP38405 381 aa11.79□□□□□ -0.52
TUBB3-202ENST00000553656 PSMB10P40306 273 aa11.79□□□□□ -0.52
TUBB3-202ENST00000553656 GSK3AP49840 483 aa11.79□□□□□ -0.52
TUBB3-202ENST00000553656 PDLIM4P50479 330 aa11.79□□□□□ -0.52
TUBB3-202ENST00000553656 ST3GAL4Q11206 333 aa11.79□□□□□ -0.52
TUBB3-202ENST00000553656 ELMOD2Q8IZ81 293 aa11.79□□□□□ -0.52
TUBB3-202ENST00000553656 KLHL36Q8N4N3 616 aa11.79□□□□□ -0.52
TUBB3-202ENST00000553656 ZNF525Q8N782 197 aa11.79□□□□□ -0.52
TUBB3-202ENST00000553656 OR51E1Q8TCB6 317 aa11.79□□□□□ -0.52
TUBB3-202ENST00000553656 HAVCR2Q8TDQ0 301 aa11.79□□□□□ -0.52
TUBB3-202ENST00000553656 RORBQ92753 470 aa11.79□□□□□ -0.52
TUBB3-202ENST00000553656 ITFG2Q969R8 447 aa11.79□□□□□ -0.52
TUBB3-202ENST00000553656 FAM71F1Q96KD3 344 aaPredicted RBP11.79□□□□□ -0.52
TUBB3-202ENST00000553656 Q96MF0 132 aa11.79□□□□□ -0.52
TUBB3-202ENST00000553656 SLC30A2Q9BRI3 323 aa11.79□□□□□ -0.52
TUBB3-202ENST00000553656 RHNO1Q9BSD3 238 aa11.79□□□□□ -0.52
TUBB3-202ENST00000553656 GPR84Q9NQS5 396 aa11.79□□□□□ -0.52
TUBB3-202ENST00000553656 TPRKBQ9Y3C4 175 aa11.79□□□□□ -0.52
TUBB3-202ENST00000553656 PDZD2O15018 2839 aa11.79□□□□□ -0.52
TUBB3-202ENST00000553656 CCDC168Q8NDH2 2452 aa11.78□□□□□ -0.52
TUBB3-202ENST00000553656 ARID1AO14497 2285 aa11.78□□□□□ -0.52
TUBB3-202ENST00000553656 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP11.78□□□□□ -0.52
TUBB3-202ENST00000553656 A0A1B0GVI7 797 aa11.78□□□□□ -0.52
TUBB3-202ENST00000553656 TTRP02766 147 aa11.78□□□□□ -0.52
TUBB3-202ENST00000553656 HPXP02790 462 aa11.78□□□□□ -0.52
TUBB3-202ENST00000553656 CD55P08174 381 aa11.78□□□□□ -0.52
TUBB3-202ENST00000553656 ATP6V1B1P15313 513 aa11.78□□□□□ -0.52
TUBB3-202ENST00000553656 TNFRSF1AP19438 455 aa11.78□□□□□ -0.52
TUBB3-202ENST00000553656 MAP2K3P46734 347 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms