RNA–Protein interactions for RNA: ENST00000553426.1

LINC00643-202, long intergenic non-protein coding RNA 643, humanhuman

TSL 3 BASIC

Gene LINC00643, Length 526 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00643-202ENST00000553426 SAMHD1Q9Y3Z3 626 aaKnown RBP10.64□□□□□ -0.71
LINC00643-202ENST00000553426 COMMD3-BMI1R4GMX3 469 aa10.64□□□□□ -0.71
LINC00643-202ENST00000553426 hCG_1807616A0A1W2PRN6 198 aa10.63□□□□□ -0.71
LINC00643-202ENST00000553426 A6NLC8 198 aa10.63□□□□□ -0.71
LINC00643-202ENST00000553426 ANKRD30BLA7E2S9 258 aa10.63□□□□□ -0.71
LINC00643-202ENST00000553426 B2RBV5 119 aa10.63□□□□□ -0.71
LINC00643-202ENST00000553426 LGALS8O00214 317 aa10.63□□□□□ -0.71
LINC00643-202ENST00000553426 PLATP00750 562 aa10.63□□□□□ -0.71
LINC00643-202ENST00000553426 EGR1P18146 543 aa10.63□□□□□ -0.71
LINC00643-202ENST00000553426 HSD11B1P28845 292 aa10.63□□□□□ -0.71
LINC00643-202ENST00000553426 OTX1P32242 354 aaPredicted RBP10.63□□□□□ -0.71
LINC00643-202ENST00000553426 GRK5P34947 590 aa10.63□□□□□ -0.71
LINC00643-202ENST00000553426 MAGEA2P43356 314 aa10.63□□□□□ -0.71
LINC00643-202ENST00000553426 SLC25A1P53007 311 aa10.63□□□□□ -0.71
LINC00643-202ENST00000553426 GRB2P62993 217 aaKnown RBP10.63□□□□□ -0.71
LINC00643-202ENST00000553426 CRMP1Q14194 572 aa10.63□□□□□ -0.71
LINC00643-202ENST00000553426 SLC9A3R2Q15599 337 aa10.63□□□□□ -0.71
LINC00643-202ENST00000553426 MPPED2Q15777 294 aa10.63□□□□□ -0.71
LINC00643-202ENST00000553426 TIGD6Q17RP2 521 aa10.63□□□□□ -0.71
LINC00643-202ENST00000553426 MICAQ29983 383 aa10.63□□□□□ -0.71
LINC00643-202ENST00000553426 GLYATL3Q5SZD4 288 aa10.63□□□□□ -0.71
LINC00643-202ENST00000553426 SFRP4Q6FHJ7 346 aaPredicted RBP10.63□□□□□ -0.71
LINC00643-202ENST00000553426 OR2T5Q6IEZ7 315 aa10.63□□□□□ -0.71
LINC00643-202ENST00000553426 ZNF770Q6IQ21 691 aaPredicted RBP10.63□□□□□ -0.71
LINC00643-202ENST00000553426 LYPD2Q6UXB3 125 aa10.63□□□□□ -0.71
LINC00643-202ENST00000553426 FITM2Q8N6M3 262 aa10.63□□□□□ -0.71
LINC00643-202ENST00000553426 PNLDC1Q8NA58 520 aaKnown RBP10.63□□□□□ -0.71
LINC00643-202ENST00000553426 OR10S1Q8NGN2 331 aa10.63□□□□□ -0.71
LINC00643-202ENST00000553426 OR2T29Q8NH02 315 aa10.63□□□□□ -0.71
LINC00643-202ENST00000553426 OR8S1Q8NH09 359 aa10.63□□□□□ -0.71
LINC00643-202ENST00000553426 NSL1Q96IY1 281 aa10.63□□□□□ -0.71
LINC00643-202ENST00000553426 LRGUKQ96M69 825 aa10.63□□□□□ -0.71
LINC00643-202ENST00000553426 ZNF48Q96MX3 618 aaPredicted RBP10.63□□□□□ -0.71
LINC00643-202ENST00000553426 TOR3AQ9H497 397 aa10.63□□□□□ -0.71
LINC00643-202ENST00000553426 U3KQV3 271 aa10.63□□□□□ -0.71
LINC00643-202ENST00000553426 OOEPA6NGQ2 149 aa10.62□□□□□ -0.71
LINC00643-202ENST00000553426 POM121CA8CG34 1229 aa10.62□□□□□ -0.71
LINC00643-202ENST00000553426 C3orf80F5H4A9 247 aa10.62□□□□□ -0.71
LINC00643-202ENST00000553426 TBX1O43435 398 aa10.62□□□□□ -0.71
LINC00643-202ENST00000553426 ADAM20O43506 726 aa10.62□□□□□ -0.71
LINC00643-202ENST00000553426 PTBP3O95758 552 aaKnown RBP10.62□□□□□ -0.71
LINC00643-202ENST00000553426 GYPBP06028 91 aa10.62□□□□□ -0.71
LINC00643-202ENST00000553426 ANXA2P07355 339 aaKnown RBP10.62□□□□□ -0.71
LINC00643-202ENST00000553426 GRPP07492 148 aa10.62□□□□□ -0.71
LINC00643-202ENST00000553426 SPI1P17947 270 aa10.62□□□□□ -0.71
LINC00643-202ENST00000553426 ATP6V1B2P21281 511 aa10.62□□□□□ -0.71
LINC00643-202ENST00000553426 CFL1P23528 166 aaKnown RBP10.62□□□□□ -0.71
LINC00643-202ENST00000553426 PSMB10P40306 273 aa10.62□□□□□ -0.71
LINC00643-202ENST00000553426 FGF12P61328 243 aa10.62□□□□□ -0.71
LINC00643-202ENST00000553426 TRIM25Q14258 630 aaKnown RBP10.62□□□□□ -0.71
LINC00643-202ENST00000553426 GK3PQ14409 553 aa10.62□□□□□ -0.71
LINC00643-202ENST00000553426 PCK2Q16822 640 aa10.62□□□□□ -0.71
LINC00643-202ENST00000553426 TEX30Q5JUR7 227 aa10.62□□□□□ -0.71
LINC00643-202ENST00000553426 ZNF362Q5T0B9 420 aaPredicted RBP10.62□□□□□ -0.71
LINC00643-202ENST00000553426 FTMTQ8N4E7 242 aa10.62□□□□□ -0.71
LINC00643-202ENST00000553426 ZNF511Q8NB15 262 aa10.62□□□□□ -0.71
LINC00643-202ENST00000553426 C19orf18Q8NEA5 215 aa10.62□□□□□ -0.71
LINC00643-202ENST00000553426 OR56B2PQ8NGI1 322 aa10.62□□□□□ -0.71
LINC00643-202ENST00000553426 OR8D4Q8NGM9 314 aa10.62□□□□□ -0.71
LINC00643-202ENST00000553426 TEX47Q8TBZ9 253 aa10.62□□□□□ -0.71
LINC00643-202ENST00000553426 DACT3Q96B18 629 aaPredicted RBP10.62□□□□□ -0.71
LINC00643-202ENST00000553426 PCGF1Q9BSM1 259 aa10.62□□□□□ -0.71
LINC00643-202ENST00000553426 DGCR6LQ9BY27 220 aa10.62□□□□□ -0.71
LINC00643-202ENST00000553426 C1orf123Q9NWV4 160 aa10.62□□□□□ -0.71
LINC00643-202ENST00000553426 DOCK11Q5JSL3 2073 aa10.62□□□□□ -0.71
LINC00643-202ENST00000553426 MEGF8Q7Z7M0 2845 aa10.62□□□□□ -0.71
LINC00643-202ENST00000553426 ZNF879B4DU55 563 aa10.61□□□□□ -0.71
LINC00643-202ENST00000553426 H3BN98 237 aa10.61□□□□□ -0.71
LINC00643-202ENST00000553426 P2RY10O00398 339 aa10.61□□□□□ -0.71
LINC00643-202ENST00000553426 TOX4O94842 621 aa10.61□□□□□ -0.71
LINC00643-202ENST00000553426 SOX14O95416 240 aa10.61□□□□□ -0.71
LINC00643-202ENST00000553426 CRYBA1P05813 215 aa10.61□□□□□ -0.71
LINC00643-202ENST00000553426 SLC2A1P11166 492 aa10.61□□□□□ -0.71
LINC00643-202ENST00000553426 PAICSP22234 425 aaKnown RBP10.61□□□□□ -0.71
LINC00643-202ENST00000553426 CX3CR1P49238 355 aa10.61□□□□□ -0.71
LINC00643-202ENST00000553426 GYS2P54840 703 aa10.61□□□□□ -0.71
LINC00643-202ENST00000553426 PPP1R8Q12972 351 aaKnown RBP10.61□□□□□ -0.71
LINC00643-202ENST00000553426 EIF2B1Q14232 305 aaKnown RBP10.61□□□□□ -0.71
LINC00643-202ENST00000553426 SNCBQ16143 134 aa10.61□□□□□ -0.71
LINC00643-202ENST00000553426 C11orf91Q3C1V1 193 aa10.61□□□□□ -0.71
LINC00643-202ENST00000553426 METTL11BQ5VVY1 283 aa10.61□□□□□ -0.71
LINC00643-202ENST00000553426 LCN8Q6JVE9 175 aa10.61□□□□□ -0.71
LINC00643-202ENST00000553426 C16orf87Q6PH81 154 aa10.61□□□□□ -0.71
LINC00643-202ENST00000553426 LYPD4Q6UWN0 246 aa10.61□□□□□ -0.71
LINC00643-202ENST00000553426 ZNF841Q6ZN19 808 aa10.61□□□□□ -0.71
LINC00643-202ENST00000553426 SPATC1Q76KD6 591 aa10.61□□□□□ -0.71
LINC00643-202ENST00000553426 SHFQ7M4L6 423 aa10.61□□□□□ -0.71
LINC00643-202ENST00000553426 OR52H1Q8NGJ2 320 aa10.61□□□□□ -0.71
LINC00643-202ENST00000553426 ZNRF4Q8WWF5 429 aa10.61□□□□□ -0.71
LINC00643-202ENST00000553426 OTULINQ96BN8 352 aa10.61□□□□□ -0.71
LINC00643-202ENST00000553426 C1orf147Q96MC9 270 aaPredicted RBP10.61□□□□□ -0.71
LINC00643-202ENST00000553426 INTS14Q96SY0 518 aa10.61□□□□□ -0.71
LINC00643-202ENST00000553426 NMNAT2Q9BZQ4 307 aa10.61□□□□□ -0.71
LINC00643-202ENST00000553426 UNKLQ9H9P5 680 aaKnown RBP10.61□□□□□ -0.71
LINC00643-202ENST00000553426 NOX4Q9NPH5 578 aa10.61□□□□□ -0.71
LINC00643-202ENST00000553426 TCRBV5S2A0A599 114 aa10.6□□□□□ -0.71
LINC00643-202ENST00000553426 DHRS12A0PJE2 317 aa10.6□□□□□ -0.71
LINC00643-202ENST00000553426 C22orf46C9J442 243 aa10.6□□□□□ -0.71
LINC00643-202ENST00000553426 GNGT2O14610 69 aa10.6□□□□□ -0.71
LINC00643-202ENST00000553426 TMPRSS2O15393 492 aa10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 76.2 ms