RNA–Protein interactions for RNA: ENST00000553405.1

MTHFD1-204, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 2

Gene MTHFD1, Length 833 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-204ENST00000553405 J3QLW9 94 aa12.67□□□□□ -0.38
MTHFD1-204ENST00000553405 XRCC2O43543 280 aa12.67□□□□□ -0.38
MTHFD1-204ENST00000553405 RPP14O95059 124 aaKnown RBP12.67□□□□□ -0.38
MTHFD1-204ENST00000553405 RAF1P04049 648 aa12.67□□□□□ -0.38
MTHFD1-204ENST00000553405 ZNF19P17023 458 aa12.67□□□□□ -0.38
MTHFD1-204ENST00000553405 CCL1P22362 96 aa12.67□□□□□ -0.38
MTHFD1-204ENST00000553405 ACKR3P25106 362 aa12.67□□□□□ -0.38
MTHFD1-204ENST00000553405 MED21Q13503 144 aa12.67□□□□□ -0.38
MTHFD1-204ENST00000553405 WDR38Q5JTN6 314 aa12.67□□□□□ -0.38
MTHFD1-204ENST00000553405 OR2T2Q6IF00 324 aa12.67□□□□□ -0.38
MTHFD1-204ENST00000553405 NANOGP1Q8N7R0 232 aa12.67□□□□□ -0.38
MTHFD1-204ENST00000553405 SPRYD4Q8WW59 207 aaPredicted RBP12.67□□□□□ -0.38
MTHFD1-204ENST00000553405 MBD6Q96DN6 1003 aa12.67□□□□□ -0.38
MTHFD1-204ENST00000553405 REEP6Q96HR9 211 aa12.67□□□□□ -0.38
MTHFD1-204ENST00000553405 PGAM5Q96HS1 289 aa12.67□□□□□ -0.38
MTHFD1-204ENST00000553405 OR10A2Q9H208 303 aa12.67□□□□□ -0.38
MTHFD1-204ENST00000553405 RGCCQ9H4X1 137 aa12.67□□□□□ -0.38
MTHFD1-204ENST00000553405 SP140LQ9H930 580 aa12.67□□□□□ -0.38
MTHFD1-204ENST00000553405 SCN3BQ9NY72 215 aa12.67□□□□□ -0.38
MTHFD1-204ENST00000553405 FRRS1LQ9P0K9 344 aa12.67□□□□□ -0.38
MTHFD1-204ENST00000553405 DUSP13Q9UII6 198 aa12.67□□□□□ -0.38
MTHFD1-204ENST00000553405 TPRKBQ9Y3C4 175 aa12.67□□□□□ -0.38
MTHFD1-204ENST00000553405 SIRT4Q9Y6E7 314 aaPredicted RBP12.67□□□□□ -0.38
MTHFD1-204ENST00000553405 MAST4O15021 2626 aa12.67□□□□□ -0.38
MTHFD1-204ENST00000553405 MYO9AB2RTY4 2548 aa12.66□□□□□ -0.38
MTHFD1-204ENST00000553405 ARID1AO14497 2285 aa12.66□□□□□ -0.38
MTHFD1-204ENST00000553405 ZSCAN5BA6NJL1 495 aa12.66□□□□□ -0.38
MTHFD1-204ENST00000553405 H7C417 338 aa12.66□□□□□ -0.38
MTHFD1-204ENST00000553405 MT-ND2P03891 347 aa12.66□□□□□ -0.38
MTHFD1-204ENST00000553405 TACSTD2P09758 323 aa12.66□□□□□ -0.38
MTHFD1-204ENST00000553405 ALDH3B1P43353 468 aa12.66□□□□□ -0.38
MTHFD1-204ENST00000553405 TGM4P49221 684 aa12.66□□□□□ -0.38
MTHFD1-204ENST00000553405 PPOXP50336 477 aa12.66□□□□□ -0.38
MTHFD1-204ENST00000553405 CCR9P51686 369 aa12.66□□□□□ -0.38
MTHFD1-204ENST00000553405 GTF2A1P52655 376 aaPredicted RBP12.66□□□□□ -0.38
MTHFD1-204ENST00000553405 GABARAPL2P60520 117 aa12.66□□□□□ -0.38
MTHFD1-204ENST00000553405 PRSS48Q7RTY5 328 aa12.66□□□□□ -0.38
MTHFD1-204ENST00000553405 FAM220AQ7Z4H9 259 aa12.66□□□□□ -0.38
MTHFD1-204ENST00000553405 ZCCHC24Q8N2G6 241 aaKnown RBP12.66□□□□□ -0.38
MTHFD1-204ENST00000553405 STX19Q8N4C7 294 aa12.66□□□□□ -0.38
MTHFD1-204ENST00000553405 NINJ1Q92982 152 aa12.66□□□□□ -0.38
MTHFD1-204ENST00000553405 MYDGFQ969H8 173 aa12.66□□□□□ -0.38
MTHFD1-204ENST00000553405 CCL19Q99731 98 aa12.66□□□□□ -0.38
MTHFD1-204ENST00000553405 CACNG6Q9BXT2 260 aa12.66□□□□□ -0.38
MTHFD1-204ENST00000553405 YTHDF1Q9BYJ9 559 aaKnown RBP12.66□□□□□ -0.38
MTHFD1-204ENST00000553405 OPA3Q9H6K4 179 aa12.66□□□□□ -0.38
MTHFD1-204ENST00000553405 TAAR3PQ9P1P4 343 aa12.66□□□□□ -0.38
MTHFD1-204ENST00000553405 N6AMT1Q9Y5N5 214 aa12.66□□□□□ -0.38
MTHFD1-204ENST00000553405 CD300LBA8K4G0 201 aa12.65□□□□□ -0.38
MTHFD1-204ENST00000553405 OGG1O15527 345 aa12.65□□□□□ -0.38
MTHFD1-204ENST00000553405 TBX1O43435 398 aa12.65□□□□□ -0.38
MTHFD1-204ENST00000553405 MT-ND5P03915 603 aa12.65□□□□□ -0.38
MTHFD1-204ENST00000553405 ADH4P08319 380 aa12.65□□□□□ -0.38
MTHFD1-204ENST00000553405 MYL12AP19105 171 aa12.65□□□□□ -0.38
MTHFD1-204ENST00000553405 GCH1P30793 250 aa12.65□□□□□ -0.38
MTHFD1-204ENST00000553405 CDKN1AP38936 164 aa12.65□□□□□ -0.38
MTHFD1-204ENST00000553405 GSK3AP49840 483 aa12.65□□□□□ -0.38
MTHFD1-204ENST00000553405 MALLQ13021 153 aa12.65□□□□□ -0.38
MTHFD1-204ENST00000553405 BCL2L15Q5TBC7 163 aa12.65□□□□□ -0.38
MTHFD1-204ENST00000553405 PGAP1Q75T13 922 aa12.65□□□□□ -0.38
MTHFD1-204ENST00000553405 CDH24Q86UP0 819 aa12.65□□□□□ -0.38
MTHFD1-204ENST00000553405 KLHL36Q8N4N3 616 aa12.65□□□□□ -0.38
MTHFD1-204ENST00000553405 OR51E1Q8TCB6 317 aa12.65□□□□□ -0.38
MTHFD1-204ENST00000553405 GPR84Q9NQS5 396 aa12.65□□□□□ -0.38
MTHFD1-204ENST00000553405 BABAM2Q9NXR7 383 aa12.65□□□□□ -0.38
MTHFD1-204ENST00000553405 ZNF391Q9UJN7 358 aa12.65□□□□□ -0.38
MTHFD1-204ENST00000553405 CHD3Q12873 2000 aaKnown RBP12.65□□□□□ -0.38
MTHFD1-204ENST00000553405 PRRC2AP48634 2157 aaKnown RBP12.64□□□□□ -0.39
MTHFD1-204ENST00000553405 LOC390937A0A1W2PQ73 354 aa12.64□□□□□ -0.39
MTHFD1-204ENST00000553405 VSTM5A8MXK1 200 aa12.64□□□□□ -0.39
MTHFD1-204ENST00000553405 M0R233 179 aa12.64□□□□□ -0.39
MTHFD1-204ENST00000553405 MLNRO43193 412 aa12.64□□□□□ -0.39
MTHFD1-204ENST00000553405 RGS10O43665 173 aa12.64□□□□□ -0.39
MTHFD1-204ENST00000553405 NDUFS7O75251 213 aa12.64□□□□□ -0.39
MTHFD1-204ENST00000553405 NAT2P11245 290 aa12.64□□□□□ -0.39
MTHFD1-204ENST00000553405 SNRPD2P62316 118 aaKnown RBP12.64□□□□□ -0.39
MTHFD1-204ENST00000553405 MRPL28Q13084 256 aaKnown RBP12.64□□□□□ -0.39
MTHFD1-204ENST00000553405 ALKBH1Q13686 389 aaKnown RBP12.64□□□□□ -0.39
MTHFD1-204ENST00000553405 CDK5R1Q15078 307 aa12.64□□□□□ -0.39
MTHFD1-204ENST00000553405 TIGD6Q17RP2 521 aa12.64□□□□□ -0.39
MTHFD1-204ENST00000553405 DMKNQ6E0U4 476 aaPredicted RBP12.64□□□□□ -0.39
MTHFD1-204ENST00000553405 MRPL21Q7Z2W9 205 aaKnown RBP12.64□□□□□ -0.39
MTHFD1-204ENST00000553405 KLBQ86Z14 1044 aa12.64□□□□□ -0.39
MTHFD1-204ENST00000553405 KRTAP1-3Q8IUG1 177 aa12.64□□□□□ -0.39
MTHFD1-204ENST00000553405 OR56B2PQ8NGI1 322 aa12.64□□□□□ -0.39
MTHFD1-204ENST00000553405 GATAD2BQ8WXI9 593 aa12.64□□□□□ -0.39
MTHFD1-204ENST00000553405 RGP1Q92546 391 aaPredicted RBP12.64□□□□□ -0.39
MTHFD1-204ENST00000553405 PIGTQ969N2 578 aa12.64□□□□□ -0.39
MTHFD1-204ENST00000553405 MRPL48Q96GC5 212 aaKnown RBP12.64□□□□□ -0.39
MTHFD1-204ENST00000553405 SORCS2Q96PQ0 1159 aa12.64□□□□□ -0.39
MTHFD1-204ENST00000553405 OR5M11Q96RB7 305 aa12.64□□□□□ -0.39
MTHFD1-204ENST00000553405 SLC30A2Q9BRI3 323 aa12.64□□□□□ -0.39
MTHFD1-204ENST00000553405 GSX2Q9BZM3 304 aa12.64□□□□□ -0.39
MTHFD1-204ENST00000553405 LRCH1Q9Y2L9 728 aa12.64□□□□□ -0.39
MTHFD1-204ENST00000553405 A0A1W2PPW3 197 aa12.63□□□□□ -0.39
MTHFD1-204ENST00000553405 C17orf100A8MU93 164 aa12.63□□□□□ -0.39
MTHFD1-204ENST00000553405 P2RY10O00398 339 aa12.63□□□□□ -0.39
MTHFD1-204ENST00000553405 NCR1O76036 304 aa12.63□□□□□ -0.39
MTHFD1-204ENST00000553405 ZFPL1O95159 310 aa12.63□□□□□ -0.39
MTHFD1-204ENST00000553405 IGHV4-39P01824 125 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms