RNA–Protein interactions for RNA: ENST00000553391.2

MTHFD1-203, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 4

Gene MTHFD1, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-203ENST00000553391 VSIG8P0DPA2 414 aa8.2□□□□□ -1.1
MTHFD1-203ENST00000553391 PSMB1P20618 241 aaKnown RBP8.2□□□□□ -1.1
MTHFD1-203ENST00000553391 GSK3AP49840 483 aa8.2□□□□□ -1.1
MTHFD1-203ENST00000553391 CCR6P51684 374 aa8.2□□□□□ -1.1
MTHFD1-203ENST00000553391 RNPS1Q15287 305 aaKnown RBP8.2□□□□□ -1.1
MTHFD1-203ENST00000553391 TBRG1Q3YBR2 411 aa8.2□□□□□ -1.1
MTHFD1-203ENST00000553391 ZNF260Q3ZCT1 412 aa8.2□□□□□ -1.1
MTHFD1-203ENST00000553391 TMEM255AQ5JRV8 349 aa8.2□□□□□ -1.1
MTHFD1-203ENST00000553391 ATAD3CQ5T2N8 411 aa8.2□□□□□ -1.1
MTHFD1-203ENST00000553391 OR10K2Q6IF99 312 aa8.2□□□□□ -1.1
MTHFD1-203ENST00000553391 UTS2BQ765I0 119 aa8.2□□□□□ -1.1
MTHFD1-203ENST00000553391 OR2W3Q7Z3T1 314 aa8.2□□□□□ -1.1
MTHFD1-203ENST00000553391 ABHD12BQ7Z5M8 362 aaPredicted RBP8.2□□□□□ -1.1
MTHFD1-203ENST00000553391 ADGRE4PQ86SQ3 457 aa8.2□□□□□ -1.1
MTHFD1-203ENST00000553391 LIX1LQ8IVB5 337 aa8.2□□□□□ -1.1
MTHFD1-203ENST00000553391 FDCSPQ8NFU4 85 aa8.2□□□□□ -1.1
MTHFD1-203ENST00000553391 OR52H1Q8NGJ2 320 aa8.2□□□□□ -1.1
MTHFD1-203ENST00000553391 GCDHQ92947 438 aaPredicted RBP8.2□□□□□ -1.1
MTHFD1-203ENST00000553391 C1orf147Q96MC9 270 aaPredicted RBP8.2□□□□□ -1.1
MTHFD1-203ENST00000553391 NUDT16L1Q9BRJ7 211 aaKnown RBP8.2□□□□□ -1.1
MTHFD1-203ENST00000553391 OR10A2Q9H208 303 aa8.2□□□□□ -1.1
MTHFD1-203ENST00000553391 CALHM2Q9HA72 323 aa8.2□□□□□ -1.1
MTHFD1-203ENST00000553391 SCPEP1Q9HB40 452 aa8.2□□□□□ -1.1
MTHFD1-203ENST00000553391 TAS2R8Q9NYW2 309 aa8.2□□□□□ -1.1
MTHFD1-203ENST00000553391 EMC3Q9P0I2 261 aa8.2□□□□□ -1.1
MTHFD1-203ENST00000553391 LIPGQ9Y5X9 500 aa8.2□□□□□ -1.1
MTHFD1-203ENST00000553391 NCOA6Q14686 2063 aaPredicted RBP8.2□□□□□ -1.1
MTHFD1-203ENST00000553391 CNTRLQ7Z7A1 2325 aa8.19□□□□□ -1.1
MTHFD1-203ENST00000553391 METTL21EPA6NDL7 271 aa8.19□□□□□ -1.1
MTHFD1-203ENST00000553391 DHRS7CA6NNS2 312 aa8.19□□□□□ -1.1
MTHFD1-203ENST00000553391 PROB1E7EW31 1015 aa8.19□□□□□ -1.1
MTHFD1-203ENST00000553391 EFSO43281 561 aa8.19□□□□□ -1.1
MTHFD1-203ENST00000553391 DHRS3O75911 302 aa8.19□□□□□ -1.1
MTHFD1-203ENST00000553391 CHRM2P08172 466 aa8.19□□□□□ -1.1
MTHFD1-203ENST00000553391 NAT2P11245 290 aa8.19□□□□□ -1.1
MTHFD1-203ENST00000553391 B4GALT1P15291 398 aa8.19□□□□□ -1.1
MTHFD1-203ENST00000553391 ZNF93P35789 620 aaPredicted RBP8.19□□□□□ -1.1
MTHFD1-203ENST00000553391 ALDH3B1P43353 468 aa8.19□□□□□ -1.1
MTHFD1-203ENST00000553391 MECP2P51608 486 aaKnown RBP8.19□□□□□ -1.1
MTHFD1-203ENST00000553391 RRAS2P62070 204 aaPredicted RBP8.19□□□□□ -1.1
MTHFD1-203ENST00000553391 GUCA2AQ02747 115 aa8.19□□□□□ -1.1
MTHFD1-203ENST00000553391 HGFACQ04756 655 aa8.19□□□□□ -1.1
MTHFD1-203ENST00000553391 PMPCAQ10713 525 aa8.19□□□□□ -1.1
MTHFD1-203ENST00000553391 CLN3Q13286 438 aa8.19□□□□□ -1.1
MTHFD1-203ENST00000553391 UNC119Q13432 240 aa8.19□□□□□ -1.1
MTHFD1-203ENST00000553391 UBE2V2Q15819 145 aa8.19□□□□□ -1.1
MTHFD1-203ENST00000553391 KCNJ8Q15842 424 aa8.19□□□□□ -1.1
MTHFD1-203ENST00000553391 GSG1Q2KHT4 349 aa8.19□□□□□ -1.1
MTHFD1-203ENST00000553391 MOGAT2Q3SYC2 334 aa8.19□□□□□ -1.1
MTHFD1-203ENST00000553391 RAB12Q6IQ22 244 aa8.19□□□□□ -1.1
MTHFD1-203ENST00000553391 COLCA1Q6ZS62 124 aa8.19□□□□□ -1.1
MTHFD1-203ENST00000553391 SLC16A14Q7RTX9 510 aa8.19□□□□□ -1.1
MTHFD1-203ENST00000553391 NUFIP2Q7Z417 695 aaKnown RBP8.19□□□□□ -1.1
MTHFD1-203ENST00000553391 CDH24Q86UP0 819 aa8.19□□□□□ -1.1
MTHFD1-203ENST00000553391 TMEM229BQ8NBD8 167 aa8.19□□□□□ -1.1
MTHFD1-203ENST00000553391 OR56B4Q8NH76 319 aa8.19□□□□□ -1.1
MTHFD1-203ENST00000553391 AKR7LQ8NHP1 331 aa8.19□□□□□ -1.1
MTHFD1-203ENST00000553391 FNDC9Q8TBE3 224 aa8.19□□□□□ -1.1
MTHFD1-203ENST00000553391 UBASH3BQ8TF42 649 aa8.19□□□□□ -1.1
MTHFD1-203ENST00000553391 AQP3Q92482 292 aa8.19□□□□□ -1.1
MTHFD1-203ENST00000553391 FAM46BQ96A09 425 aa8.19□□□□□ -1.1
MTHFD1-203ENST00000553391 PHF21AQ96BD5 680 aa8.19□□□□□ -1.1
MTHFD1-203ENST00000553391 MED30Q96HR3 178 aa8.19□□□□□ -1.1
MTHFD1-203ENST00000553391 PRRG4Q9BZD6 226 aa8.19□□□□□ -1.1
MTHFD1-203ENST00000553391 EXO5Q9H790 373 aa8.19□□□□□ -1.1
MTHFD1-203ENST00000553391 GP6Q9HCN6 339 aa8.19□□□□□ -1.1
MTHFD1-203ENST00000553391 B3GNT2Q9NY97 397 aa8.19□□□□□ -1.1
MTHFD1-203ENST00000553391 MYEF2Q9P2K5 600 aaKnown RBP8.19□□□□□ -1.1
MTHFD1-203ENST00000553391 SPRR3Q9UBC9 169 aa8.19□□□□□ -1.1
MTHFD1-203ENST00000553391 ZNF107Q9UII5 783 aaPredicted RBP8.19□□□□□ -1.1
MTHFD1-203ENST00000553391 ZNF221Q9UK13 617 aa8.19□□□□□ -1.1
MTHFD1-203ENST00000553391 POU2F3Q9UKI9 436 aa8.19□□□□□ -1.1
MTHFD1-203ENST00000553391 TRAV6A0A075B6T7 132 aa8.18□□□□□ -1.1
MTHFD1-203ENST00000553391 ZNF891A8MT65 544 aaPredicted RBP8.18□□□□□ -1.1
MTHFD1-203ENST00000553391 ICMTO60725 284 aa8.18□□□□□ -1.1
MTHFD1-203ENST00000553391 MTRF1O75570 445 aaKnown RBP8.18□□□□□ -1.1
MTHFD1-203ENST00000553391 FARS2O95363 451 aaKnown RBP8.18□□□□□ -1.1
MTHFD1-203ENST00000553391 TGM6O95932 706 aa8.18□□□□□ -1.1
MTHFD1-203ENST00000553391 LCATP04180 440 aa8.18□□□□□ -1.1
MTHFD1-203ENST00000553391 IL5P05113 134 aa8.18□□□□□ -1.1
MTHFD1-203ENST00000553391 CSF1P09603 554 aa8.18□□□□□ -1.1
MTHFD1-203ENST00000553391 UBBP0CG47 229 aa8.18□□□□□ -1.1
MTHFD1-203ENST00000553391 COX5BP10606 129 aa8.18□□□□□ -1.1
MTHFD1-203ENST00000553391 NOVA1P51513 510 aaKnown RBP8.18□□□□□ -1.1
MTHFD1-203ENST00000553391 FOXG1P55316 489 aaPredicted RBP8.18□□□□□ -1.1
MTHFD1-203ENST00000553391 RAB25P57735 213 aa8.18□□□□□ -1.1
MTHFD1-203ENST00000553391 TNK1Q13470 666 aa8.18□□□□□ -1.1
MTHFD1-203ENST00000553391 RSPO4Q2I0M5 234 aaPredicted RBP8.18□□□□□ -1.1
MTHFD1-203ENST00000553391 DEFB109BQ30KR1 87 aa8.18□□□□□ -1.1
MTHFD1-203ENST00000553391 SNAI3Q3KNW1 292 aa8.18□□□□□ -1.1
MTHFD1-203ENST00000553391 CDNFQ49AH0 187 aa8.18□□□□□ -1.1
MTHFD1-203ENST00000553391 GLIPR1L1Q6UWM5 242 aa8.18□□□□□ -1.1
MTHFD1-203ENST00000553391 PLXDC2Q6UX71 529 aa8.18□□□□□ -1.1
MTHFD1-203ENST00000553391 CHMP1BQ7LBR1 199 aa8.18□□□□□ -1.1
MTHFD1-203ENST00000553391 ZC3HAV1Q7Z2W4 902 aaKnown RBP8.18□□□□□ -1.1
MTHFD1-203ENST00000553391 TCTE3Q8IZS6 198 aa8.18□□□□□ -1.1
MTHFD1-203ENST00000553391 FAM89BQ8N5H3 189 aa8.18□□□□□ -1.1
MTHFD1-203ENST00000553391 CPEB3Q8NE35 698 aaKnown RBP8.18□□□□□ -1.1
MTHFD1-203ENST00000553391 PP6455Q8WZ26 134 aa8.18□□□□□ -1.1
MTHFD1-203ENST00000553391 RNF170Q96K19 258 aa8.18□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms