RNA–Protein interactions for RNA: ENST00000552896.1

TRAFD1-209, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

APPRIS ALT2 TSL 3

Gene TRAFD1, Length 983 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-209ENST00000552896 FAM206AQ9NX38 181 aa9.95□□□□□ -0.82
TRAFD1-209ENST00000552896 MRPL15Q9P015 296 aaKnown RBP9.95□□□□□ -0.82
TRAFD1-209ENST00000552896 IKZF2Q9UKS7 526 aa9.95□□□□□ -0.82
TRAFD1-209ENST00000552896 hCG_38984A0A1B0GV85 526 aa9.94□□□□□ -0.82
TRAFD1-209ENST00000552896 A0A1W2PQL4 384 aaPredicted RBP9.94□□□□□ -0.82
TRAFD1-209ENST00000552896 CD300LBA8K4G0 201 aa9.94□□□□□ -0.82
TRAFD1-209ENST00000552896 SMAD7O15105 426 aaKnown RBP9.94□□□□□ -0.82
TRAFD1-209ENST00000552896 TPD52L2O43399 206 aaKnown RBP9.94□□□□□ -0.82
TRAFD1-209ENST00000552896 LILRA1O75019 489 aa9.94□□□□□ -0.82
TRAFD1-209ENST00000552896 APOL3O95236 402 aa9.94□□□□□ -0.82
TRAFD1-209ENST00000552896 TNFRSF1AP19438 455 aa9.94□□□□□ -0.82
TRAFD1-209ENST00000552896 USF1P22415 310 aaPredicted RBP9.94□□□□□ -0.82
TRAFD1-209ENST00000552896 ATP6V1E1P36543 226 aa9.94□□□□□ -0.82
TRAFD1-209ENST00000552896 CRYBB2P43320 205 aa9.94□□□□□ -0.82
TRAFD1-209ENST00000552896 MMP16P51512 607 aa9.94□□□□□ -0.82
TRAFD1-209ENST00000552896 PRSS12P56730 875 aa9.94□□□□□ -0.82
TRAFD1-209ENST00000552896 TNFAIP6P98066 277 aaPredicted RBP9.94□□□□□ -0.82
TRAFD1-209ENST00000552896 ZNF91Q05481 1191 aa9.94□□□□□ -0.82
TRAFD1-209ENST00000552896 SLC34A1Q06495 639 aa9.94□□□□□ -0.82
TRAFD1-209ENST00000552896 IL18R1Q13478 541 aa9.94□□□□□ -0.82
TRAFD1-209ENST00000552896 OR8B8Q15620 311 aa9.94□□□□□ -0.82
TRAFD1-209ENST00000552896 ZNF691Q5VV52 312 aa9.94□□□□□ -0.82
TRAFD1-209ENST00000552896 TTC23Q5W5X9 447 aa9.94□□□□□ -0.82
TRAFD1-209ENST00000552896 SSX6Q7RTT6 188 aa9.94□□□□□ -0.82
TRAFD1-209ENST00000552896 SETD9Q8NE22 299 aa9.94□□□□□ -0.82
TRAFD1-209ENST00000552896 OR10H4Q8NGA5 316 aa9.94□□□□□ -0.82
TRAFD1-209ENST00000552896 OR10AD1Q8NGE0 317 aa9.94□□□□□ -0.82
TRAFD1-209ENST00000552896 OR8B12Q8NGG6 310 aa9.94□□□□□ -0.82
TRAFD1-209ENST00000552896 OR56B2PQ8NGI1 322 aa9.94□□□□□ -0.82
TRAFD1-209ENST00000552896 SPRYD4Q8WW59 207 aaPredicted RBP9.94□□□□□ -0.82
TRAFD1-209ENST00000552896 CYGBQ8WWM9 190 aa9.94□□□□□ -0.82
TRAFD1-209ENST00000552896 RNFT2Q96EX2 444 aa9.94□□□□□ -0.82
TRAFD1-209ENST00000552896 SLC22A4Q9H015 551 aa9.94□□□□□ -0.82
TRAFD1-209ENST00000552896 BRD7Q9NPI1 651 aa9.94□□□□□ -0.82
TRAFD1-209ENST00000552896 ZNF275Q9NSD4 429 aaPredicted RBP9.94□□□□□ -0.82
TRAFD1-209ENST00000552896 NKX1-2Q9UD57 310 aaPredicted RBP9.94□□□□□ -0.82
TRAFD1-209ENST00000552896 IL19Q9UHD0 177 aa9.94□□□□□ -0.82
TRAFD1-209ENST00000552896 A0A0U1RQV5 110 aa9.93□□□□□ -0.82
TRAFD1-209ENST00000552896 TMEM269A0A1B0GVZ9 245 aa9.93□□□□□ -0.82
TRAFD1-209ENST00000552896 GGT3PA6NGU5 568 aa9.93□□□□□ -0.82
TRAFD1-209ENST00000552896 LYNX1G3V0Z9 82 aa9.93□□□□□ -0.82
TRAFD1-209ENST00000552896 H0YHG0 523 aa9.93□□□□□ -0.82
TRAFD1-209ENST00000552896 PSMD9O00233 223 aa9.93□□□□□ -0.82
TRAFD1-209ENST00000552896 MLNRO43193 412 aa9.93□□□□□ -0.82
TRAFD1-209ENST00000552896 SRSF10O75494 262 aaKnown RBP9.93□□□□□ -0.82
TRAFD1-209ENST00000552896 KRT8P05787 483 aa9.93□□□□□ -0.82
TRAFD1-209ENST00000552896 TACSTD2P09758 323 aa9.93□□□□□ -0.82
TRAFD1-209ENST00000552896 LYNX1P0DP58 116 aa9.93□□□□□ -0.82
TRAFD1-209ENST00000552896 DBTP11182 482 aaKnown RBP9.93□□□□□ -0.82
TRAFD1-209ENST00000552896 DDOSTP39656 456 aa9.93□□□□□ -0.82
TRAFD1-209ENST00000552896 SRP9P49458 86 aaKnown RBP9.93□□□□□ -0.82
TRAFD1-209ENST00000552896 ADARB1P78563 741 aaKnown RBP9.93□□□□□ -0.82
TRAFD1-209ENST00000552896 FAM3AP98173 230 aa9.93□□□□□ -0.82
TRAFD1-209ENST00000552896 MFGE8Q08431 387 aaPredicted RBP9.93□□□□□ -0.82
TRAFD1-209ENST00000552896 SNCBQ16143 134 aa9.93□□□□□ -0.82
TRAFD1-209ENST00000552896 HFEQ30201 348 aa9.93□□□□□ -0.82
TRAFD1-209ENST00000552896 GFOD2Q3B7J2 385 aa9.93□□□□□ -0.82
TRAFD1-209ENST00000552896 ZNF684Q5T5D7 378 aa9.93□□□□□ -0.82
TRAFD1-209ENST00000552896 KLBQ86Z14 1044 aa9.93□□□□□ -0.82
TRAFD1-209ENST00000552896 DHRSXQ8N5I4 330 aa9.93□□□□□ -0.82
TRAFD1-209ENST00000552896 APH1BQ8WW43 257 aa9.93□□□□□ -0.82
TRAFD1-209ENST00000552896 ITFG2Q969R8 447 aa9.93□□□□□ -0.82
TRAFD1-209ENST00000552896 OR2V2Q96R30 315 aa9.93□□□□□ -0.82
TRAFD1-209ENST00000552896 TBX5Q99593 518 aa9.93□□□□□ -0.82
TRAFD1-209ENST00000552896 ADAT1Q9BUB4 502 aaKnown RBP9.93□□□□□ -0.82
TRAFD1-209ENST00000552896 ADI1Q9BV57 179 aa9.93□□□□□ -0.82
TRAFD1-209ENST00000552896 TMEM100Q9NV29 134 aa9.93□□□□□ -0.82
TRAFD1-209ENST00000552896 ZNF319Q9P2F9 582 aa9.93□□□□□ -0.82
TRAFD1-209ENST00000552896 NUFIP1Q9UHK0 495 aaKnown RBP9.93□□□□□ -0.82
TRAFD1-209ENST00000552896 MRM2Q9UI43 246 aaKnown RBP9.93□□□□□ -0.82
TRAFD1-209ENST00000552896 PCDHGB1Q9Y5G3 927 aa9.93□□□□□ -0.82
TRAFD1-209ENST00000552896 N6AMT1Q9Y5N5 214 aa9.93□□□□□ -0.82
TRAFD1-209ENST00000552896 DOCK11Q5JSL3 2073 aa9.93□□□□□ -0.82
TRAFD1-209ENST00000552896 HIVEP2P31629 2446 aa9.92□□□□□ -0.82
TRAFD1-209ENST00000552896 IGHV4-61A0A0C4DH41 118 aa9.92□□□□□ -0.82
TRAFD1-209ENST00000552896 CLDN25C9JDP6 229 aa9.92□□□□□ -0.82
TRAFD1-209ENST00000552896 LOC110117498-PIK3R3F6TDL0 507 aa9.92□□□□□ -0.82
TRAFD1-209ENST00000552896 H0YAE9 185 aa9.92□□□□□ -0.82
TRAFD1-209ENST00000552896 J3QRE1 110 aa9.92□□□□□ -0.82
TRAFD1-209ENST00000552896 IFNL4K9M1U5 179 aa9.92□□□□□ -0.82
TRAFD1-209ENST00000552896 GMDSO60547 372 aa9.92□□□□□ -0.82
TRAFD1-209ENST00000552896 CDC14BO60729 498 aa9.92□□□□□ -0.82
TRAFD1-209ENST00000552896 WBP4O75554 376 aaKnown RBP9.92□□□□□ -0.82
TRAFD1-209ENST00000552896 SULT1C4O75897 302 aa9.92□□□□□ -0.82
TRAFD1-209ENST00000552896 HEXAP06865 529 aa9.92□□□□□ -0.82
TRAFD1-209ENST00000552896 COL8A2P25067 703 aa9.92□□□□□ -0.82
TRAFD1-209ENST00000552896 CAPGP40121 348 aa9.92□□□□□ -0.82
TRAFD1-209ENST00000552896 CD200P41217 278 aa9.92□□□□□ -0.82
TRAFD1-209ENST00000552896 GATA4P43694 442 aa9.92□□□□□ -0.82
TRAFD1-209ENST00000552896 GPR6P46095 362 aaPredicted RBP9.92□□□□□ -0.82
TRAFD1-209ENST00000552896 GSK3AP49840 483 aa9.92□□□□□ -0.82
TRAFD1-209ENST00000552896 CHN2P52757 468 aa9.92□□□□□ -0.82
TRAFD1-209ENST00000552896 TMEM33P57088 247 aa9.92□□□□□ -0.82
TRAFD1-209ENST00000552896 ISL1P61371 349 aa9.92□□□□□ -0.82
TRAFD1-209ENST00000552896 IL5RAQ01344 420 aa9.92□□□□□ -0.82
TRAFD1-209ENST00000552896 KRTAP1-1Q07627 177 aa9.92□□□□□ -0.82
TRAFD1-209ENST00000552896 SLC3A1Q07837 685 aa9.92□□□□□ -0.82
TRAFD1-209ENST00000552896 BCL2L15Q5TBC7 163 aa9.92□□□□□ -0.82
TRAFD1-209ENST00000552896 FAM220AQ7Z4H9 259 aa9.92□□□□□ -0.82
TRAFD1-209ENST00000552896 FTMTQ8N4E7 242 aa9.92□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms