RNA–Protein interactions for RNA: ENST00000552839.6

TMEM116-218, Transcript of transmembrane protein 116, humanhuman

TSL 4

Gene TMEM116, Length 511 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-218ENST00000552839 C10orf105Q8TEF2 133 aa9.77□□□□□ -0.85
TMEM116-218ENST00000552839 FBLIM1Q8WUP2 373 aa9.77□□□□□ -0.85
TMEM116-218ENST00000552839 FAM168AQ92567 244 aa9.77□□□□□ -0.85
TMEM116-218ENST00000552839 AMELYQ99218 206 aa9.77□□□□□ -0.85
TMEM116-218ENST00000552839 MND1Q9BWT6 205 aa9.77□□□□□ -0.85
TMEM116-218ENST00000552839 FGF20Q9NP95 211 aaPredicted RBP9.77□□□□□ -0.85
TMEM116-218ENST00000552839 PNRC2Q9NPJ4 139 aaKnown RBP9.77□□□□□ -0.85
TMEM116-218ENST00000552839 CBLN4Q9NTU7 201 aa9.77□□□□□ -0.85
TMEM116-218ENST00000552839 ERVK13-1Q9NX77 482 aa9.77□□□□□ -0.85
TMEM116-218ENST00000552839 PTTG3PQ9NZH4 202 aa9.77□□□□□ -0.85
TMEM116-218ENST00000552839 CMAHPQ9Y471 501 aa9.77□□□□□ -0.85
TMEM116-218ENST00000552839 SVEP1Q4LDE5 3571 aa9.77□□□□□ -0.85
TMEM116-218ENST00000552839 ARFGEF3Q5TH69 2177 aa9.77□□□□□ -0.85
TMEM116-218ENST00000552839 TMEM269A0A1B0GVZ9 245 aa9.76□□□□□ -0.85
TMEM116-218ENST00000552839 E7EQL1 145 aa9.76□□□□□ -0.85
TMEM116-218ENST00000552839 J3QW42 95 aa9.76□□□□□ -0.85
TMEM116-218ENST00000552839 XRCC2O43543 280 aa9.76□□□□□ -0.85
TMEM116-218ENST00000552839 IGHA1P01876 353 aa9.76□□□□□ -0.85
TMEM116-218ENST00000552839 CDK1P06493 297 aa9.76□□□□□ -0.85
TMEM116-218ENST00000552839 ACSM4P0C7M7 580 aa9.76□□□□□ -0.85
TMEM116-218ENST00000552839 BMP4P12644 408 aa9.76□□□□□ -0.85
TMEM116-218ENST00000552839 USF1P22415 310 aaPredicted RBP9.76□□□□□ -0.85
TMEM116-218ENST00000552839 NR4A1P22736 598 aa9.76□□□□□ -0.85
TMEM116-218ENST00000552839 UCP2P55851 309 aa9.76□□□□□ -0.85
TMEM116-218ENST00000552839 ZNF121P58317 390 aaPredicted RBP9.76□□□□□ -0.85
TMEM116-218ENST00000552839 GABARAPL2P60520 117 aa9.76□□□□□ -0.85
TMEM116-218ENST00000552839 ZNF85Q03923 595 aa9.76□□□□□ -0.85
TMEM116-218ENST00000552839 ZNF718Q3SXZ3 478 aa9.76□□□□□ -0.85
TMEM116-218ENST00000552839 FAM120AOSQ5T036 256 aa9.76□□□□□ -0.85
TMEM116-218ENST00000552839 RFPL4BQ6ZWI9 263 aa9.76□□□□□ -0.85
TMEM116-218ENST00000552839 SSX6Q7RTT6 188 aa9.76□□□□□ -0.85
TMEM116-218ENST00000552839 PAQR4Q8N4S7 273 aaPredicted RBP9.76□□□□□ -0.85
TMEM116-218ENST00000552839 SVOPQ8N4V2 548 aa9.76□□□□□ -0.85
TMEM116-218ENST00000552839 NUP37Q8NFH4 326 aa9.76□□□□□ -0.85
TMEM116-218ENST00000552839 OR52H1Q8NGJ2 320 aa9.76□□□□□ -0.85
TMEM116-218ENST00000552839 OR10S1Q8NGN2 331 aa9.76□□□□□ -0.85
TMEM116-218ENST00000552839 YTHDF1Q9BYJ9 559 aaKnown RBP9.76□□□□□ -0.85
TMEM116-218ENST00000552839 CHODLQ9H9P2 273 aa9.76□□□□□ -0.85
TMEM116-218ENST00000552839 VCX3AQ9NNX9 186 aa9.76□□□□□ -0.85
TMEM116-218ENST00000552839 DYNLRB1Q9NP97 96 aa9.76□□□□□ -0.85
TMEM116-218ENST00000552839 TRIM36Q9NQ86 728 aa9.76□□□□□ -0.85
TMEM116-218ENST00000552839 CA10Q9NS85 328 aa9.76□□□□□ -0.85
TMEM116-218ENST00000552839 ACOXLQ9NUZ1 547 aa9.76□□□□□ -0.85
TMEM116-218ENST00000552839 MRPS18AQ9NVS2 196 aaKnown RBP9.76□□□□□ -0.85
TMEM116-218ENST00000552839 GPR160Q9UJ42 338 aa9.76□□□□□ -0.85
TMEM116-218ENST00000552839 R4GMQ9 66 aa9.76□□□□□ -0.85
TMEM116-218ENST00000552839 GGT3PA6NGU5 568 aa9.75□□□□□ -0.85
TMEM116-218ENST00000552839 MAGEB4O15481 346 aaPredicted RBP9.75□□□□□ -0.85
TMEM116-218ENST00000552839 TIMM8AO60220 97 aaPredicted RBP9.75□□□□□ -0.85
TMEM116-218ENST00000552839 TNFAIP8O95379 198 aa9.75□□□□□ -0.85
TMEM116-218ENST00000552839 ZNF35P13682 527 aa9.75□□□□□ -0.85
TMEM116-218ENST00000552839 CFL1P23528 166 aaKnown RBP9.75□□□□□ -0.85
TMEM116-218ENST00000552839 CRHBPP24387 322 aa9.75□□□□□ -0.85
TMEM116-218ENST00000552839 GLRXP35754 106 aa9.75□□□□□ -0.85
TMEM116-218ENST00000552839 CHN2P52757 468 aa9.75□□□□□ -0.85
TMEM116-218ENST00000552839 KLF3P57682 345 aaPredicted RBP9.75□□□□□ -0.85
TMEM116-218ENST00000552839 SNRPD2P62316 118 aaKnown RBP9.75□□□□□ -0.85
TMEM116-218ENST00000552839 ROM1Q03395 351 aa9.75□□□□□ -0.85
TMEM116-218ENST00000552839 MOGQ16653 247 aa9.75□□□□□ -0.85
TMEM116-218ENST00000552839 NKPD1Q17RQ9 610 aa9.75□□□□□ -0.85
TMEM116-218ENST00000552839 CDONQ4KMG0 1287 aa9.75□□□□□ -0.85
TMEM116-218ENST00000552839 LIPNQ5VXI9 398 aa9.75□□□□□ -0.85
TMEM116-218ENST00000552839 FAM166AQ6J272 317 aa9.75□□□□□ -0.85
TMEM116-218ENST00000552839 PGAP1Q75T13 922 aa9.75□□□□□ -0.85
TMEM116-218ENST00000552839 SYS1Q8N2H4 156 aa9.75□□□□□ -0.85
TMEM116-218ENST00000552839 SYNPRQ8TBG9 265 aa9.75□□□□□ -0.85
TMEM116-218ENST00000552839 ZNF75AQ96N20 296 aa9.75□□□□□ -0.85
TMEM116-218ENST00000552839 DHRS9Q9BPW9 319 aa9.75□□□□□ -0.85
TMEM116-218ENST00000552839 COMMD4Q9H0A8 199 aa9.75□□□□□ -0.85
TMEM116-218ENST00000552839 PLK3Q9H4B4 646 aa9.75□□□□□ -0.85
TMEM116-218ENST00000552839 OPA3Q9H6K4 179 aa9.75□□□□□ -0.85
TMEM116-218ENST00000552839 TBCCD1Q9NVR7 557 aa9.75□□□□□ -0.85
TMEM116-218ENST00000552839 UBAP1Q9NZ09 502 aa9.75□□□□□ -0.85
TMEM116-218ENST00000552839 MRM2Q9UI43 246 aaKnown RBP9.75□□□□□ -0.85
TMEM116-218ENST00000552839 DUSP13Q9UII6 198 aa9.75□□□□□ -0.85
TMEM116-218ENST00000552839 KCNS2Q9ULS6 477 aa9.75□□□□□ -0.85
TMEM116-218ENST00000552839 FZR1Q9UM11 496 aa9.75□□□□□ -0.85
TMEM116-218ENST00000552839 CAB39Q9Y376 341 aaPredicted RBP9.75□□□□□ -0.85
TMEM116-218ENST00000552839 LOC100289279A0A1B0GTE1 492 aa9.74□□□□□ -0.85
TMEM116-218ENST00000552839 A0A1B0GVI7 797 aa9.74□□□□□ -0.85
TMEM116-218ENST00000552839 PLSCR5A0PG75 271 aa9.74□□□□□ -0.85
TMEM116-218ENST00000552839 H7C417 338 aa9.74□□□□□ -0.85
TMEM116-218ENST00000552839 LY6HO94772 140 aa9.74□□□□□ -0.85
TMEM116-218ENST00000552839 MT-ND2P03891 347 aa9.74□□□□□ -0.85
TMEM116-218ENST00000552839 ERCC1P07992 297 aaPredicted RBP9.74□□□□□ -0.85
TMEM116-218ENST00000552839 SELEP16581 610 aa9.74□□□□□ -0.85
TMEM116-218ENST00000552839 TUBG1P23258 451 aa9.74□□□□□ -0.85
TMEM116-218ENST00000552839 APOBEC3AP31941 199 aaPredicted RBP9.74□□□□□ -0.85
TMEM116-218ENST00000552839 DCTDP32321 178 aa9.74□□□□□ -0.85
TMEM116-218ENST00000552839 THBS4P35443 961 aa9.74□□□□□ -0.85
TMEM116-218ENST00000552839 PSMB10P40306 273 aa9.74□□□□□ -0.85
TMEM116-218ENST00000552839 WNT5AP41221 380 aa9.74□□□□□ -0.85
TMEM116-218ENST00000552839 GZMKP49863 264 aa9.74□□□□□ -0.85
TMEM116-218ENST00000552839 ETV1P50549 477 aa9.74□□□□□ -0.85
TMEM116-218ENST00000552839 WNT4P56705 351 aa9.74□□□□□ -0.85
TMEM116-218ENST00000552839 OR12D2P58182 307 aa9.74□□□□□ -0.85
TMEM116-218ENST00000552839 TAS2R43P59537 309 aa9.74□□□□□ -0.85
TMEM116-218ENST00000552839 MED22Q15528 200 aa9.74□□□□□ -0.85
TMEM116-218ENST00000552839 ODF4Q2M2E3 257 aa9.74□□□□□ -0.85
TMEM116-218ENST00000552839 ZMAT1Q5H9K5 638 aa9.74□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms