RNA–Protein interactions for RNA: ENST00000552491.5

LIMA1-212, Transcript of LIM domain and actin binding 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene LIMA1, Length 2,652 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMA1-212ENST00000552491 EPOPA6NHQ4 379 aa4.81□□□□□ -1.64
LIMA1-212ENST00000552491 ALG1L2C9J202 215 aa4.81□□□□□ -1.64
LIMA1-212ENST00000552491 IGHMP01871 453 aa4.81□□□□□ -1.64
LIMA1-212ENST00000552491 GP1BBP13224 206 aa4.81□□□□□ -1.64
LIMA1-212ENST00000552491 GABRG2P18507 467 aa4.81□□□□□ -1.64
LIMA1-212ENST00000552491 TBPP20226 339 aa4.81□□□□□ -1.64
LIMA1-212ENST00000552491 CRABP1P29762 137 aa4.81□□□□□ -1.64
LIMA1-212ENST00000552491 GNALP38405 381 aa4.81□□□□□ -1.64
LIMA1-212ENST00000552491 NPY4RP50391 375 aa4.81□□□□□ -1.64
LIMA1-212ENST00000552491 SLC26A5P58743 744 aa4.81□□□□□ -1.64
LIMA1-212ENST00000552491 S100A12P80511 92 aa4.81□□□□□ -1.64
LIMA1-212ENST00000552491 AIMP2Q13155 320 aaKnown RBP4.81□□□□□ -1.64
LIMA1-212ENST00000552491 PCK2Q16822 640 aa4.81□□□□□ -1.64
LIMA1-212ENST00000552491 ANKRD55Q3KP44 614 aa4.81□□□□□ -1.64
LIMA1-212ENST00000552491 C9orf50Q5SZB4 431 aa4.81□□□□□ -1.64
LIMA1-212ENST00000552491 DEGS2Q6QHC5 323 aa4.81□□□□□ -1.64
LIMA1-212ENST00000552491 DRAM2Q6UX65 266 aa4.81□□□□□ -1.64
LIMA1-212ENST00000552491 COX15Q7KZN9 410 aa4.81□□□□□ -1.64
LIMA1-212ENST00000552491 DMBX1Q8NFW5 382 aa4.81□□□□□ -1.64
LIMA1-212ENST00000552491 OR1M1Q8NGA1 313 aa4.81□□□□□ -1.64
LIMA1-212ENST00000552491 OR13C9Q8NGT0 318 aa4.81□□□□□ -1.64
LIMA1-212ENST00000552491 LILRB1Q8NHL6 650 aaPredicted RBP4.81□□□□□ -1.64
LIMA1-212ENST00000552491 GLYATL2Q8WU03 294 aa4.81□□□□□ -1.64
LIMA1-212ENST00000552491 OR10C1Q96KK4 312 aa4.81□□□□□ -1.64
LIMA1-212ENST00000552491 C1orf147Q96MC9 270 aaPredicted RBP4.81□□□□□ -1.64
LIMA1-212ENST00000552491 MESP1Q9BRJ9 268 aa4.81□□□□□ -1.64
LIMA1-212ENST00000552491 LRRC61Q9BV99 259 aa4.81□□□□□ -1.64
LIMA1-212ENST00000552491 LPAR5Q9H1C0 372 aa4.81□□□□□ -1.64
LIMA1-212ENST00000552491 HRH4Q9H3N8 390 aa4.81□□□□□ -1.64
LIMA1-212ENST00000552491 ZFAND3Q9H8U3 227 aa4.81□□□□□ -1.64
LIMA1-212ENST00000552491 TREM1Q9NP99 234 aa4.81□□□□□ -1.64
LIMA1-212ENST00000552491 OR2S2Q9NQN1 319 aa4.81□□□□□ -1.64
LIMA1-212ENST00000552491 MMP26Q9NRE1 261 aa4.81□□□□□ -1.64
LIMA1-212ENST00000552491 HS3ST3A1Q9Y663 406 aa4.81□□□□□ -1.64
LIMA1-212ENST00000552491 CEP290O15078 2479 aa4.81□□□□□ -1.64
LIMA1-212ENST00000552491 A8MVM7 634 aa4.8□□□□□ -1.64
LIMA1-212ENST00000552491 ZNF705EA8MWA4 302 aaPredicted RBP4.8□□□□□ -1.64
LIMA1-212ENST00000552491 TMEM14DPA8MWL7 114 aa4.8□□□□□ -1.64
LIMA1-212ENST00000552491 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.8□□□□□ -1.64
LIMA1-212ENST00000552491 C10orf142B7Z368 130 aa4.8□□□□□ -1.64
LIMA1-212ENST00000552491 ZNF354AO60765 605 aaPredicted RBP4.8□□□□□ -1.64
LIMA1-212ENST00000552491 SCGNO76038 276 aa4.8□□□□□ -1.64
LIMA1-212ENST00000552491 FARS2O95363 451 aaKnown RBP4.8□□□□□ -1.64
LIMA1-212ENST00000552491 SEMA4FO95754 770 aa4.8□□□□□ -1.64
LIMA1-212ENST00000552491 IFNA6P05013 189 aa4.8□□□□□ -1.64
LIMA1-212ENST00000552491 HEXAP06865 529 aa4.8□□□□□ -1.64
LIMA1-212ENST00000552491 THEGLP0DJG4 465 aa4.8□□□□□ -1.64
LIMA1-212ENST00000552491 CTSEP14091 401 aa4.8□□□□□ -1.64
LIMA1-212ENST00000552491 ABOP16442 354 aa4.8□□□□□ -1.64
LIMA1-212ENST00000552491 RCC1P18754 421 aaPredicted RBP4.8□□□□□ -1.64
LIMA1-212ENST00000552491 PGCP20142 388 aa4.8□□□□□ -1.64
LIMA1-212ENST00000552491 ABCD3P28288 659 aa4.8□□□□□ -1.64
LIMA1-212ENST00000552491 HSD11B1P28845 292 aa4.8□□□□□ -1.64
LIMA1-212ENST00000552491 IL12BP29460 328 aa4.8□□□□□ -1.64
LIMA1-212ENST00000552491 LPAR6P43657 344 aa4.8□□□□□ -1.64
LIMA1-212ENST00000552491 RABIFP47224 123 aa4.8□□□□□ -1.64
LIMA1-212ENST00000552491 POLR2HP52434 150 aaKnown RBP4.8□□□□□ -1.64
LIMA1-212ENST00000552491 TMEM50BP56557 158 aa4.8□□□□□ -1.64
LIMA1-212ENST00000552491 CLDN6P56747 220 aa4.8□□□□□ -1.64
LIMA1-212ENST00000552491 TAS2R31P59538 309 aa4.8□□□□□ -1.64
LIMA1-212ENST00000552491 PJVKQ0ZLH3 352 aa4.8□□□□□ -1.64
LIMA1-212ENST00000552491 SMAD2Q15796 467 aaKnown RBP4.8□□□□□ -1.64
LIMA1-212ENST00000552491 ZNF529Q6P280 563 aa4.8□□□□□ -1.64
LIMA1-212ENST00000552491 CLEC18BQ6UXF7 455 aa4.8□□□□□ -1.64
LIMA1-212ENST00000552491 IL34Q6ZMJ4 242 aa4.8□□□□□ -1.64
LIMA1-212ENST00000552491 TTLL10Q6ZVT0 673 aa4.8□□□□□ -1.64
LIMA1-212ENST00000552491 ANGPTL5Q86XS5 388 aa4.8□□□□□ -1.64
LIMA1-212ENST00000552491 PRSS58Q8IYP2 241 aa4.8□□□□□ -1.64
LIMA1-212ENST00000552491 OR4K15Q8NH41 348 aa4.8□□□□□ -1.64
LIMA1-212ENST00000552491 NUBPLQ8TB37 319 aa4.8□□□□□ -1.64
LIMA1-212ENST00000552491 ASB10Q8WXI3 467 aa4.8□□□□□ -1.64
LIMA1-212ENST00000552491 TCTN2Q96GX1 697 aa4.8□□□□□ -1.64
LIMA1-212ENST00000552491 NRIP2Q9BQI9 281 aa4.8□□□□□ -1.64
LIMA1-212ENST00000552491 NUDT16L1Q9BRJ7 211 aaKnown RBP4.8□□□□□ -1.64
LIMA1-212ENST00000552491 EMC6Q9BV81 110 aa4.8□□□□□ -1.64
LIMA1-212ENST00000552491 TBL1XR1Q9BZK7 514 aa4.8□□□□□ -1.64
LIMA1-212ENST00000552491 BANF2Q9H503 90 aa4.8□□□□□ -1.64
LIMA1-212ENST00000552491 RHOFQ9HBH0 211 aa4.8□□□□□ -1.64
LIMA1-212ENST00000552491 PDE7BQ9NP56 450 aa4.8□□□□□ -1.64
LIMA1-212ENST00000552491 ZFP57Q9NU63 452 aa4.8□□□□□ -1.64
LIMA1-212ENST00000552491 RCC2Q9P258 522 aaKnown RBP4.8□□□□□ -1.64
LIMA1-212ENST00000552491 ZNF319Q9P2F9 582 aa4.8□□□□□ -1.64
LIMA1-212ENST00000552491 DHCR7Q9UBM7 475 aaKnown RBP4.8□□□□□ -1.64
LIMA1-212ENST00000552491 GPR132Q9UNW8 380 aa4.8□□□□□ -1.64
LIMA1-212ENST00000552491 ASCC3Q8N3C0 2202 aaKnown RBP4.8□□□□□ -1.64
LIMA1-212ENST00000552491 ADAMTS9Q9P2N4 1935 aa4.8□□□□□ -1.64
LIMA1-212ENST00000552491 A0A1W2PQD3 144 aa4.8□□□□□ -1.64
LIMA1-212ENST00000552491 TCRBV21S2A2A0A5A6 115 aa4.8□□□□□ -1.64
LIMA1-212ENST00000552491 PMS2P1A4D2B8 440 aa4.8□□□□□ -1.64
LIMA1-212ENST00000552491 COLCA2A8K830 154 aa4.8□□□□□ -1.64
LIMA1-212ENST00000552491 SHISA8B8ZZ34 492 aa4.8□□□□□ -1.64
LIMA1-212ENST00000552491 BPNT1O95861 308 aa4.8□□□□□ -1.64
LIMA1-212ENST00000552491 GLAP06280 429 aa4.8□□□□□ -1.64
LIMA1-212ENST00000552491 ACAA1P09110 424 aaPredicted RBP4.8□□□□□ -1.64
LIMA1-212ENST00000552491 H2BFMP0C1H6 154 aa4.8□□□□□ -1.64
LIMA1-212ENST00000552491 SLC2A1P11166 492 aa4.8□□□□□ -1.64
LIMA1-212ENST00000552491 ZNF823P16415 610 aa4.8□□□□□ -1.64
LIMA1-212ENST00000552491 CAPZBP47756 277 aa4.8□□□□□ -1.64
LIMA1-212ENST00000552491 SLC6A9P48067 706 aa4.8□□□□□ -1.64
LIMA1-212ENST00000552491 MEOX2P50222 304 aa4.8□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms