RNA–Protein interactions for RNA: ENST00000551845.5

PTCH1-225, Transcript of patched 1, humanhuman

TSL 5

Gene PTCH1, Length 809 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-225ENST00000551845 GABRB1P18505 474 aa9.03□□□□□ -0.96
PTCH1-225ENST00000551845 ACHEP22303 614 aa9.03□□□□□ -0.96
PTCH1-225ENST00000551845 IL5RAQ01344 420 aa9.03□□□□□ -0.96
PTCH1-225ENST00000551845 HFEQ30201 348 aa9.03□□□□□ -0.96
PTCH1-225ENST00000551845 ZNF829Q3KNS6 432 aaPredicted RBP9.03□□□□□ -0.96
PTCH1-225ENST00000551845 TMEM255AQ5JRV8 349 aa9.03□□□□□ -0.96
PTCH1-225ENST00000551845 PRSS45Q7RTY3 260 aa9.03□□□□□ -0.96
PTCH1-225ENST00000551845 CIARTQ8N365 385 aaPredicted RBP9.03□□□□□ -0.96
PTCH1-225ENST00000551845 SETD9Q8NE22 299 aa9.03□□□□□ -0.96
PTCH1-225ENST00000551845 OR2AE1Q8NHA4 323 aa9.03□□□□□ -0.96
PTCH1-225ENST00000551845 GTF3AQ92664 365 aaKnown RBP9.03□□□□□ -0.96
PTCH1-225ENST00000551845 SPSB4Q96A44 273 aa9.03□□□□□ -0.96
PTCH1-225ENST00000551845 RNFT2Q96EX2 444 aa9.03□□□□□ -0.96
PTCH1-225ENST00000551845 ELMOD3Q96FG2 381 aa9.03□□□□□ -0.96
PTCH1-225ENST00000551845 REEP6Q96HR9 211 aa9.03□□□□□ -0.96
PTCH1-225ENST00000551845 COX4I2Q96KJ9 171 aa9.03□□□□□ -0.96
PTCH1-225ENST00000551845 MYCBPQ99417 103 aaPredicted RBP9.03□□□□□ -0.96
PTCH1-225ENST00000551845 TBX5Q99593 518 aa9.03□□□□□ -0.96
PTCH1-225ENST00000551845 SLC30A2Q9BRI3 323 aa9.03□□□□□ -0.96
PTCH1-225ENST00000551845 CHODLQ9H9P2 273 aa9.03□□□□□ -0.96
PTCH1-225ENST00000551845 RNPEPL1Q9HAU8 725 aa9.03□□□□□ -0.96
PTCH1-225ENST00000551845 NKX1-2Q9UD57 310 aaPredicted RBP9.03□□□□□ -0.96
PTCH1-225ENST00000551845 IL19Q9UHD0 177 aa9.03□□□□□ -0.96
PTCH1-225ENST00000551845 NOP16Q9Y3C1 178 aaKnown RBP9.03□□□□□ -0.96
PTCH1-225ENST00000551845 RPL36Q9Y3U8 105 aaKnown RBP9.03□□□□□ -0.96
PTCH1-225ENST00000551845 ARID1AO14497 2285 aa9.02□□□□□ -0.96
PTCH1-225ENST00000551845 CSPG4Q6UVK1 2322 aa9.02□□□□□ -0.97
PTCH1-225ENST00000551845 IGHV1-69-2A0A0G2JMI3 117 aa9.02□□□□□ -0.97
PTCH1-225ENST00000551845 A0A1W2PQL4 384 aaPredicted RBP9.02□□□□□ -0.97
PTCH1-225ENST00000551845 DAPL1A0PJW8 107 aa9.02□□□□□ -0.97
PTCH1-225ENST00000551845 C5orf63A6NC05 138 aa9.02□□□□□ -0.97
PTCH1-225ENST00000551845 METTL15A6NJ78 407 aa9.02□□□□□ -0.97
PTCH1-225ENST00000551845 VWC2LB2RUY7 222 aa9.02□□□□□ -0.97
PTCH1-225ENST00000551845 H0YAE9 185 aa9.02□□□□□ -0.97
PTCH1-225ENST00000551845 GPR37O15354 613 aa9.02□□□□□ -0.97
PTCH1-225ENST00000551845 SULT1C4O75897 302 aa9.02□□□□□ -0.97
PTCH1-225ENST00000551845 APOL3O95236 402 aa9.02□□□□□ -0.97
PTCH1-225ENST00000551845 FADS2O95864 444 aaKnown RBP9.02□□□□□ -0.97
PTCH1-225ENST00000551845 TACSTD2P09758 323 aa9.02□□□□□ -0.97
PTCH1-225ENST00000551845 USF1P22415 310 aaPredicted RBP9.02□□□□□ -0.97
PTCH1-225ENST00000551845 GIFP27352 417 aa9.02□□□□□ -0.97
PTCH1-225ENST00000551845 NR4A2P43354 598 aa9.02□□□□□ -0.97
PTCH1-225ENST00000551845 SRP9P49458 86 aaKnown RBP9.02□□□□□ -0.97
PTCH1-225ENST00000551845 MMP16P51512 607 aa9.02□□□□□ -0.97
PTCH1-225ENST00000551845 PSMA6P60900 246 aaKnown RBP9.02□□□□□ -0.97
PTCH1-225ENST00000551845 ACTC1P68032 377 aa9.02□□□□□ -0.97
PTCH1-225ENST00000551845 ACTA1P68133 377 aa9.02□□□□□ -0.97
PTCH1-225ENST00000551845 FAM3AP98173 230 aa9.02□□□□□ -0.97
PTCH1-225ENST00000551845 SLC3A1Q07837 685 aa9.02□□□□□ -0.97
PTCH1-225ENST00000551845 LOXL1Q08397 574 aaPredicted RBP9.02□□□□□ -0.97
PTCH1-225ENST00000551845 IL18R1Q13478 541 aa9.02□□□□□ -0.97
PTCH1-225ENST00000551845 SNCBQ16143 134 aa9.02□□□□□ -0.97
PTCH1-225ENST00000551845 KLHL22Q53GT1 634 aa9.02□□□□□ -0.97
PTCH1-225ENST00000551845 Q6ZR03 302 aa9.02□□□□□ -0.97
PTCH1-225ENST00000551845 PLEKHG7Q6ZR37 379 aa9.02□□□□□ -0.97
PTCH1-225ENST00000551845 KCTD20Q7Z5Y7 419 aa9.02□□□□□ -0.97
PTCH1-225ENST00000551845 YIPF7Q8N8F6 280 aa9.02□□□□□ -0.97
PTCH1-225ENST00000551845 BHLHE23Q8NDY6 225 aa9.02□□□□□ -0.97
PTCH1-225ENST00000551845 CCL17Q92583 94 aa9.02□□□□□ -0.97
PTCH1-225ENST00000551845 ITFG2Q969R8 447 aa9.02□□□□□ -0.97
PTCH1-225ENST00000551845 MRPL48Q96GC5 212 aaKnown RBP9.02□□□□□ -0.97
PTCH1-225ENST00000551845 TTTY10Q9BZA0 68 aa9.02□□□□□ -0.97
PTCH1-225ENST00000551845 AMBNQ9NP70 447 aa9.02□□□□□ -0.97
PTCH1-225ENST00000551845 ZNF319Q9P2F9 582 aa9.02□□□□□ -0.97
PTCH1-225ENST00000551845 ZNF391Q9UJN7 358 aa9.02□□□□□ -0.97
PTCH1-225ENST00000551845 EXOGQ9Y2C4 368 aaKnown RBP9.02□□□□□ -0.97
PTCH1-225ENST00000551845 HSPE1-MOB4S4R3N1 261 aa9.02□□□□□ -0.97
PTCH1-225ENST00000551845 NSD1Q96L73 2696 aaPredicted RBP9.02□□□□□ -0.97
PTCH1-225ENST00000551845 ANKRD30BLA7E2S9 258 aa9.01□□□□□ -0.97
PTCH1-225ENST00000551845 MAGEB4O15481 346 aaPredicted RBP9.01□□□□□ -0.97
PTCH1-225ENST00000551845 PPIHO43447 177 aaKnown RBP9.01□□□□□ -0.97
PTCH1-225ENST00000551845 GMDSO60547 372 aa9.01□□□□□ -0.97
PTCH1-225ENST00000551845 NCR1O76036 304 aa9.01□□□□□ -0.97
PTCH1-225ENST00000551845 CLIC3O95833 236 aa9.01□□□□□ -0.97
PTCH1-225ENST00000551845 HLA-DPB1P04440 258 aa9.01□□□□□ -0.97
PTCH1-225ENST00000551845 GPR6P46095 362 aaPredicted RBP9.01□□□□□ -0.97
PTCH1-225ENST00000551845 ADARB1P78563 741 aaKnown RBP9.01□□□□□ -0.97
PTCH1-225ENST00000551845 MZT1Q08AG7 82 aa9.01□□□□□ -0.97
PTCH1-225ENST00000551845 RIN1Q13671 783 aa9.01□□□□□ -0.97
PTCH1-225ENST00000551845 GFOD2Q3B7J2 385 aa9.01□□□□□ -0.97
PTCH1-225ENST00000551845 ZNF691Q5VV52 312 aa9.01□□□□□ -0.97
PTCH1-225ENST00000551845 PEG10Q86TG7 708 aaKnown RBP9.01□□□□□ -0.97
PTCH1-225ENST00000551845 FTMTQ8N4E7 242 aa9.01□□□□□ -0.97
PTCH1-225ENST00000551845 ACBD7Q8N6N7 88 aa9.01□□□□□ -0.97
PTCH1-225ENST00000551845 SPERTQ8NA61 448 aa9.01□□□□□ -0.97
PTCH1-225ENST00000551845 CSNK2A3Q8NEV1 391 aa9.01□□□□□ -0.97
PTCH1-225ENST00000551845 RAB1CQ92928 201 aa9.01□□□□□ -0.97
PTCH1-225ENST00000551845 YIPF5Q969M3 257 aa9.01□□□□□ -0.97
PTCH1-225ENST00000551845 LGALS12Q96DT0 336 aa9.01□□□□□ -0.97
PTCH1-225ENST00000551845 SIGLEC11Q96RL6 698 aa9.01□□□□□ -0.97
PTCH1-225ENST00000551845 ADI1Q9BV57 179 aa9.01□□□□□ -0.97
PTCH1-225ENST00000551845 BPESC1Q9GZL8 116 aa9.01□□□□□ -0.97
PTCH1-225ENST00000551845 PBOV1Q9GZY1 135 aa9.01□□□□□ -0.97
PTCH1-225ENST00000551845 VCX3BQ9H321 246 aa9.01□□□□□ -0.97
PTCH1-225ENST00000551845 ZNF275Q9NSD4 429 aaPredicted RBP9.01□□□□□ -0.97
PTCH1-225ENST00000551845 FAM206AQ9NX38 181 aa9.01□□□□□ -0.97
PTCH1-225ENST00000551845 MRPL15Q9P015 296 aaKnown RBP9.01□□□□□ -0.97
PTCH1-225ENST00000551845 MRM2Q9UI43 246 aaKnown RBP9.01□□□□□ -0.97
PTCH1-225ENST00000551845 SNX5Q9Y5X3 404 aa9.01□□□□□ -0.97
PTCH1-225ENST00000551845 R4GMQ9 66 aa9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms