RNA–Protein interactions for RNA: ENST00000551716.5

CACNB3-220, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 3

Gene CACNB3, Length 544 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-220ENST00000551716 CLIC3O95833 236 aa12.41□□□□□ -0.42
CACNB3-220ENST00000551716 IFNA14P01570 189 aa12.41□□□□□ -0.42
CACNB3-220ENST00000551716 GGT2P36268 569 aa12.41□□□□□ -0.42
CACNB3-220ENST00000551716 NAA10P41227 235 aaPredicted RBP12.41□□□□□ -0.42
CACNB3-220ENST00000551716 TGM4P49221 684 aa12.41□□□□□ -0.42
CACNB3-220ENST00000551716 TPTEP56180 551 aa12.41□□□□□ -0.42
CACNB3-220ENST00000551716 PRSS12P56730 875 aa12.41□□□□□ -0.42
CACNB3-220ENST00000551716 MESTQ5EB52 335 aa12.41□□□□□ -0.42
CACNB3-220ENST00000551716 RABL3Q5HYI8 236 aa12.41□□□□□ -0.42
CACNB3-220ENST00000551716 WDR38Q5JTN6 314 aa12.41□□□□□ -0.42
CACNB3-220ENST00000551716 GPR139Q6DWJ6 353 aa12.41□□□□□ -0.42
CACNB3-220ENST00000551716 OR9Q1Q8NGQ5 310 aa12.41□□□□□ -0.42
CACNB3-220ENST00000551716 H1FXQ92522 213 aaKnown RBP12.41□□□□□ -0.42
CACNB3-220ENST00000551716 Q96M85 177 aa12.41□□□□□ -0.42
CACNB3-220ENST00000551716 WNT10AQ9GZT5 417 aa12.41□□□□□ -0.42
CACNB3-220ENST00000551716 SYT4Q9H2B2 425 aa12.41□□□□□ -0.42
CACNB3-220ENST00000551716 KAT8Q9H7Z6 458 aaKnown RBP12.41□□□□□ -0.42
CACNB3-220ENST00000551716 ADAM18Q9Y3Q7 739 aa12.41□□□□□ -0.42
CACNB3-220ENST00000551716 LHFPL6Q9Y693 200 aa12.41□□□□□ -0.42
CACNB3-220ENST00000551716 BHLHE40O14503 412 aa12.4□□□□□ -0.42
CACNB3-220ENST00000551716 CHST1O43916 411 aa12.4□□□□□ -0.42
CACNB3-220ENST00000551716 ZFPL1O95159 310 aa12.4□□□□□ -0.42
CACNB3-220ENST00000551716 CD83Q01151 205 aa12.4□□□□□ -0.42
CACNB3-220ENST00000551716 PRKCDQ05655 676 aa12.4□□□□□ -0.42
CACNB3-220ENST00000551716 IKZF1Q13422 519 aa12.4□□□□□ -0.42
CACNB3-220ENST00000551716 FHL1Q13642 323 aa12.4□□□□□ -0.42
CACNB3-220ENST00000551716 PCK2Q16822 640 aa12.4□□□□□ -0.42
CACNB3-220ENST00000551716 VMACQ2NL98 169 aa12.4□□□□□ -0.42
CACNB3-220ENST00000551716 OTPQ5XKR4 325 aa12.4□□□□□ -0.42
CACNB3-220ENST00000551716 DNM1P34Q6PK57 102 aa12.4□□□□□ -0.42
CACNB3-220ENST00000551716 TSEN54Q7Z6J9 526 aaKnown RBP12.4□□□□□ -0.42
CACNB3-220ENST00000551716 MICU2Q8IYU8 434 aa12.4□□□□□ -0.42
CACNB3-220ENST00000551716 RNF113BQ8IZP6 322 aaKnown RBP12.4□□□□□ -0.42
CACNB3-220ENST00000551716 FGFRL1Q8N441 504 aa12.4□□□□□ -0.42
CACNB3-220ENST00000551716 MED30Q96HR3 178 aa12.4□□□□□ -0.42
CACNB3-220ENST00000551716 CGREF1Q99674 301 aa12.4□□□□□ -0.42
CACNB3-220ENST00000551716 PITX2Q99697 317 aa12.4□□□□□ -0.42
CACNB3-220ENST00000551716 VSX1Q9NZR4 365 aaPredicted RBP12.4□□□□□ -0.42
CACNB3-220ENST00000551716 NDUFAF1Q9Y375 327 aa12.4□□□□□ -0.42
CACNB3-220ENST00000551716 A0A1W2PQ09 198 aa12.39□□□□□ -0.43
CACNB3-220ENST00000551716 H0YAE9 185 aa12.39□□□□□ -0.43
CACNB3-220ENST00000551716 POU1F1P28069 291 aa12.39□□□□□ -0.43
CACNB3-220ENST00000551716 CRABP1P29762 137 aa12.39□□□□□ -0.43
CACNB3-220ENST00000551716 CENPAP49450 140 aa12.39□□□□□ -0.43
CACNB3-220ENST00000551716 BMXP51813 675 aa12.39□□□□□ -0.43
CACNB3-220ENST00000551716 DLX1P56177 255 aa12.39□□□□□ -0.43
CACNB3-220ENST00000551716 MTPNP58546 118 aa12.39□□□□□ -0.43
CACNB3-220ENST00000551716 CNN3Q15417 329 aaKnown RBP12.39□□□□□ -0.43
CACNB3-220ENST00000551716 ZBED5Q49AG3 693 aa12.39□□□□□ -0.43
CACNB3-220ENST00000551716 AGKQ53H12 422 aa12.39□□□□□ -0.43
CACNB3-220ENST00000551716 FAM122BQ7Z309 247 aa12.39□□□□□ -0.43
CACNB3-220ENST00000551716 RNF144BQ7Z419 303 aa12.39□□□□□ -0.43
CACNB3-220ENST00000551716 DHDDSQ86SQ9 333 aa12.39□□□□□ -0.43
CACNB3-220ENST00000551716 ADCK1Q86TW2 530 aa12.39□□□□□ -0.43
CACNB3-220ENST00000551716 NRMQ8IXM6 262 aa12.39□□□□□ -0.43
CACNB3-220ENST00000551716 DPP10Q8N608 796 aa12.39□□□□□ -0.43
CACNB3-220ENST00000551716 FAM216BQ8N7L0 139 aa12.39□□□□□ -0.43
CACNB3-220ENST00000551716 ANKRD42Q8N9B4 389 aa12.39□□□□□ -0.43
CACNB3-220ENST00000551716 LRRC29Q8WV35 223 aa12.39□□□□□ -0.43
CACNB3-220ENST00000551716 C17orf50Q8WW18 174 aa12.39□□□□□ -0.43
CACNB3-220ENST00000551716 AJUBAQ96IF1 538 aa12.39□□□□□ -0.43
CACNB3-220ENST00000551716 ATF6BQ99941 703 aa12.39□□□□□ -0.43
CACNB3-220ENST00000551716 NUAK2Q9H093 628 aa12.39□□□□□ -0.43
CACNB3-220ENST00000551716 RABEP2Q9H5N1 569 aa12.39□□□□□ -0.43
CACNB3-220ENST00000551716 PITPNC1Q9UKF7 332 aa12.39□□□□□ -0.43
CACNB3-220ENST00000551716 PCDHGB5Q9Y5G0 923 aa12.39□□□□□ -0.43
CACNB3-220ENST00000551716 TRBV23-1A0A0A0MS06 115 aa12.38□□□□□ -0.43
CACNB3-220ENST00000551716 A0A1B0GW55 424 aa12.38□□□□□ -0.43
CACNB3-220ENST00000551716 A0A1W2PRX2 142 aa12.38□□□□□ -0.43
CACNB3-220ENST00000551716 VGLL3A8MV65 326 aa12.38□□□□□ -0.43
CACNB3-220ENST00000551716 F2RL2O00254 374 aa12.38□□□□□ -0.43
CACNB3-220ENST00000551716 ACOT8O14734 319 aa12.38□□□□□ -0.43
CACNB3-220ENST00000551716 ANGPTL7O43827 346 aa12.38□□□□□ -0.43
CACNB3-220ENST00000551716 TIPRLO75663 272 aa12.38□□□□□ -0.43
CACNB3-220ENST00000551716 DUX4L2P0CJ85 424 aa12.38□□□□□ -0.43
CACNB3-220ENST00000551716 DUX4L3P0CJ86 424 aa12.38□□□□□ -0.43
CACNB3-220ENST00000551716 DUX4L4P0CJ87 422 aa12.38□□□□□ -0.43
CACNB3-220ENST00000551716 DUX4L5P0CJ88 424 aa12.38□□□□□ -0.43
CACNB3-220ENST00000551716 DUX4L6P0CJ89 424 aa12.38□□□□□ -0.43
CACNB3-220ENST00000551716 DUX4L7P0CJ90 424 aa12.38□□□□□ -0.43
CACNB3-220ENST00000551716 SDHAP31040 664 aa12.38□□□□□ -0.43
CACNB3-220ENST00000551716 DDOSTP39656 456 aa12.38□□□□□ -0.43
CACNB3-220ENST00000551716 MDH1P40925 334 aaKnown RBP12.38□□□□□ -0.43
CACNB3-220ENST00000551716 OR1E2P47887 323 aa12.38□□□□□ -0.43
CACNB3-220ENST00000551716 CRYBA2P53672 197 aa12.38□□□□□ -0.43
CACNB3-220ENST00000551716 LGALS4P56470 323 aa12.38□□□□□ -0.43
CACNB3-220ENST00000551716 WDR4P57081 412 aaKnown RBP12.38□□□□□ -0.43
CACNB3-220ENST00000551716 TRAP1Q12931 704 aaKnown RBP12.38□□□□□ -0.43
CACNB3-220ENST00000551716 KRR1Q13601 381 aaKnown RBP12.38□□□□□ -0.43
CACNB3-220ENST00000551716 HABP2Q14520 560 aaPredicted RBP12.38□□□□□ -0.43
CACNB3-220ENST00000551716 SLC36A3Q495N2 470 aa12.38□□□□□ -0.43
CACNB3-220ENST00000551716 ARSJQ5FYB0 599 aaPredicted RBP12.38□□□□□ -0.43
CACNB3-220ENST00000551716 CORO6Q6QEF8 472 aa12.38□□□□□ -0.43
CACNB3-220ENST00000551716 DUX4L9Q6RFH8 374 aaPredicted RBP12.38□□□□□ -0.43
CACNB3-220ENST00000551716 OR5AU1Q8NGC0 362 aa12.38□□□□□ -0.43
CACNB3-220ENST00000551716 OR13C2Q8NGS9 318 aa12.38□□□□□ -0.43
CACNB3-220ENST00000551716 OR2AJ1Q8NGZ0 328 aa12.38□□□□□ -0.43
CACNB3-220ENST00000551716 OR8S1Q8NH09 359 aa12.38□□□□□ -0.43
CACNB3-220ENST00000551716 OR10A6Q8NH74 314 aa12.38□□□□□ -0.43
CACNB3-220ENST00000551716 PIFOQ8TCI5 191 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms