RNA–Protein interactions for RNA: ENST00000551260.5

RACGAP1-223, Transcript of Rac GTPase activating protein 1, human

TSL 4

Gene RACGAP1, Length 555 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RACGAP1-223	ENST00000551260	MRPL13	Q9BYD1	178 aa	Known RBP	4.61	□□□□□ -1.67
RACGAP1-223	ENST00000551260	TSPYL1	Q9H0U9	437 aa		4.61	□□□□□ -1.67
RACGAP1-223	ENST00000551260	VNN3	Q9NY84	501 aa		4.61	□□□□□ -1.67
RACGAP1-223	ENST00000551260	ADA2	Q9NZK5	511 aa		4.61	□□□□□ -1.67
RACGAP1-223	ENST00000551260	MARCO	Q9UEW3	520 aa	Predicted RBP	4.61	□□□□□ -1.67
RACGAP1-223	ENST00000551260	PITPNC1	Q9UKF7	332 aa		4.61	□□□□□ -1.67
RACGAP1-223	ENST00000551260	TIMM10B	Q9Y5J6	103 aa		4.61	□□□□□ -1.67
RACGAP1-223	ENST00000551260	LYVE1	Q9Y5Y7	322 aa		4.61	□□□□□ -1.67
RACGAP1-223	ENST00000551260	hCG_1807616	A0A1W2PRN6	198 aa		4.6	□□□□□ -1.67
RACGAP1-223	ENST00000551260	FAM90A8P	A6NJQ4	464 aa		4.6	□□□□□ -1.67
RACGAP1-223	ENST00000551260	TMEM233	B4DJY2	109 aa		4.6	□□□□□ -1.67
RACGAP1-223	ENST00000551260		H3BSH0	61 aa		4.6	□□□□□ -1.67
RACGAP1-223	ENST00000551260	DOK2	O60496	412 aa		4.6	□□□□□ -1.67
RACGAP1-223	ENST00000551260	PEX11A	O75192	247 aa		4.6	□□□□□ -1.67
RACGAP1-223	ENST00000551260	OR6A2	O95222	327 aa		4.6	□□□□□ -1.67
RACGAP1-223	ENST00000551260	AMY1A	P04745	511 aa		4.6	□□□□□ -1.67
RACGAP1-223	ENST00000551260	GRP	P07492	148 aa		4.6	□□□□□ -1.67
RACGAP1-223	ENST00000551260	CST2	P09228	141 aa		4.6	□□□□□ -1.67
RACGAP1-223	ENST00000551260	TUBG1	P23258	451 aa		4.6	□□□□□ -1.67
RACGAP1-223	ENST00000551260	POU1F1	P28069	291 aa		4.6	□□□□□ -1.67
RACGAP1-223	ENST00000551260	MTNR1B	P49286	362 aa		4.6	□□□□□ -1.67
RACGAP1-223	ENST00000551260	GSK3B	P49841	420 aa		4.6	□□□□□ -1.67
RACGAP1-223	ENST00000551260	ZNF133	P52736	654 aa	Predicted RBP	4.6	□□□□□ -1.67
RACGAP1-223	ENST00000551260	GNG11	P61952	73 aa		4.6	□□□□□ -1.67
RACGAP1-223	ENST00000551260	OR8G1	Q15617	311 aa		4.6	□□□□□ -1.67
RACGAP1-223	ENST00000551260	PCK2	Q16822	640 aa		4.6	□□□□□ -1.67
RACGAP1-223	ENST00000551260	C9orf152	Q5JTZ5	239 aa		4.6	□□□□□ -1.67
RACGAP1-223	ENST00000551260	FAM27D1	Q5T7N8	215 aa		4.6	□□□□□ -1.67
RACGAP1-223	ENST00000551260	FAM27B	Q5VT28	67 aa		4.6	□□□□□ -1.67
RACGAP1-223	ENST00000551260	RNF220	Q5VTB9	566 aa		4.6	□□□□□ -1.67
RACGAP1-223	ENST00000551260	TEX36	Q5VZQ5	186 aa		4.6	□□□□□ -1.67
RACGAP1-223	ENST00000551260	C5orf46	Q6UWT4	87 aa		4.6	□□□□□ -1.67
RACGAP1-223	ENST00000551260	FRMD7	Q6ZUT3	714 aa		4.6	□□□□□ -1.67
RACGAP1-223	ENST00000551260	PIGW	Q7Z7B1	504 aa		4.6	□□□□□ -1.67
RACGAP1-223	ENST00000551260	ZNF575	Q86XF7	245 aa		4.6	□□□□□ -1.67
RACGAP1-223	ENST00000551260	LRRC34	Q8IZ02	419 aa		4.6	□□□□□ -1.67
RACGAP1-223	ENST00000551260	MAPKAPK5-AS1	Q8N8E1	139 aa		4.6	□□□□□ -1.67
RACGAP1-223	ENST00000551260	OR4Q3	Q8NH05	313 aa		4.6	□□□□□ -1.67
RACGAP1-223	ENST00000551260	HDAC2	Q92769	488 aa	Known RBP	4.6	□□□□□ -1.67
RACGAP1-223	ENST00000551260	ERGIC1	Q969X5	290 aa		4.6	□□□□□ -1.67
RACGAP1-223	ENST00000551260	NMD3	Q96D46	503 aa	Known RBP	4.6	□□□□□ -1.67
RACGAP1-223	ENST00000551260	NOL4L	Q96MY1	436 aa	Predicted RBP	4.6	□□□□□ -1.67
RACGAP1-223	ENST00000551260	CCDC115	Q96NT0	180 aa		4.6	□□□□□ -1.67
RACGAP1-223	ENST00000551260	CDRT15	Q96T59	188 aa		4.6	□□□□□ -1.67
RACGAP1-223	ENST00000551260	CPPED1	Q9BRF8	314 aa	Predicted RBP	4.6	□□□□□ -1.67
RACGAP1-223	ENST00000551260	ERP44	Q9BS26	406 aa		4.6	□□□□□ -1.67
RACGAP1-223	ENST00000551260	WAC	Q9BTA9	647 aa		4.6	□□□□□ -1.67
RACGAP1-223	ENST00000551260	EMC7	Q9NPA0	242 aa		4.6	□□□□□ -1.67
RACGAP1-223	ENST00000551260	TUBG2	Q9NRH3	451 aa		4.6	□□□□□ -1.67
RACGAP1-223	ENST00000551260	LINC00527	Q9UJ94	153 aa		4.6	□□□□□ -1.67
RACGAP1-223	ENST00000551260	NDUFAF1	Q9Y375	327 aa		4.6	□□□□□ -1.67
RACGAP1-223	ENST00000551260	TMED5	Q9Y3A6	229 aa		4.6	□□□□□ -1.67
RACGAP1-223	ENST00000551260		A6NLC8	198 aa		4.59	□□□□□ -1.67
RACGAP1-223	ENST00000551260	TMEM114	B3SHH9	223 aa		4.59	□□□□□ -1.67
RACGAP1-223	ENST00000551260	ANKHD1-EIF4EBP3	H7C0V5	636 aa	Predicted RBP	4.59	□□□□□ -1.67
RACGAP1-223	ENST00000551260	AGRN	O00468	2067 aa		4.59	□□□□□ -1.67
RACGAP1-223	ENST00000551260	RHBDL1	O75783	438 aa		4.59	□□□□□ -1.67
RACGAP1-223	ENST00000551260	CH25H	O95992	272 aa		4.59	□□□□□ -1.67
RACGAP1-223	ENST00000551260	NEFH	P12036	1026 aa		4.59	□□□□□ -1.67
RACGAP1-223	ENST00000551260	ACADS	P16219	412 aa		4.59	□□□□□ -1.67
RACGAP1-223	ENST00000551260	ZNF20	P17024	532 aa		4.59	□□□□□ -1.67
RACGAP1-223	ENST00000551260	NDUFB7	P17568	137 aa		4.59	□□□□□ -1.67
RACGAP1-223	ENST00000551260	PRPS1L1	P21108	318 aa		4.59	□□□□□ -1.67
RACGAP1-223	ENST00000551260	CA6	P23280	308 aa		4.59	□□□□□ -1.67
RACGAP1-223	ENST00000551260	ECHS1	P30084	290 aa		4.59	□□□□□ -1.67
RACGAP1-223	ENST00000551260	CASQ1	P31415	396 aa		4.59	□□□□□ -1.67
RACGAP1-223	ENST00000551260	OR3A4P	P47883	348 aa		4.59	□□□□□ -1.67
RACGAP1-223	ENST00000551260	TGM4	P49221	684 aa		4.59	□□□□□ -1.67
RACGAP1-223	ENST00000551260	GMFB	P60983	142 aa		4.59	□□□□□ -1.67
RACGAP1-223	ENST00000551260	KHDRBS1	Q07666	443 aa	Known RBP eCLIP	4.59	□□□□□ -1.67
RACGAP1-223	ENST00000551260	BLMH	Q13867	455 aa		4.59	□□□□□ -1.67
RACGAP1-223	ENST00000551260	KRT72	Q14CN4	511 aa		4.59	□□□□□ -1.67
RACGAP1-223	ENST00000551260	RNF151	Q2KHN1	245 aa		4.59	□□□□□ -1.67
RACGAP1-223	ENST00000551260	LRRC10	Q5BKY1	277 aa		4.59	□□□□□ -1.67
RACGAP1-223	ENST00000551260	SLC25A47	Q6Q0C1	308 aa		4.59	□□□□□ -1.67
RACGAP1-223	ENST00000551260	ZNF782	Q6ZMW2	699 aa	Predicted RBP	4.59	□□□□□ -1.67
RACGAP1-223	ENST00000551260	SLC22A9	Q8IVM8	553 aa		4.59	□□□□□ -1.67
RACGAP1-223	ENST00000551260	FAM185A	Q8N0U4	392 aa		4.59	□□□□□ -1.67
RACGAP1-223	ENST00000551260	NATD1	Q8N6N6	113 aa		4.59	□□□□□ -1.67
RACGAP1-223	ENST00000551260	SPATA4	Q8NEY3	305 aa		4.59	□□□□□ -1.67
RACGAP1-223	ENST00000551260	OR5D13	Q8NGL4	314 aa		4.59	□□□□□ -1.67
RACGAP1-223	ENST00000551260	ASB10	Q8WXI3	467 aa		4.59	□□□□□ -1.67
RACGAP1-223	ENST00000551260	ACOT11	Q8WXI4	607 aa	Predicted RBP	4.59	□□□□□ -1.67
RACGAP1-223	ENST00000551260	SEPHS2	Q99611	448 aa		4.59	□□□□□ -1.67
RACGAP1-223	ENST00000551260	EPYC	Q99645	322 aa		4.59	□□□□□ -1.67
RACGAP1-223	ENST00000551260	HIPK2	Q9H2X6	1198 aa		4.59	□□□□□ -1.67
RACGAP1-223	ENST00000551260	DCLRE1B	Q9H816	532 aa		4.59	□□□□□ -1.67
RACGAP1-223	ENST00000551260	C12orf10	Q9HB07	376 aa		4.59	□□□□□ -1.67
RACGAP1-223	ENST00000551260	ISYNA1	Q9NPH2	558 aa		4.59	□□□□□ -1.67
RACGAP1-223	ENST00000551260	SNTG1	Q9NSN8	517 aa		4.59	□□□□□ -1.67
RACGAP1-223	ENST00000551260	ZNF391	Q9UJN7	358 aa		4.59	□□□□□ -1.67
RACGAP1-223	ENST00000551260	ANGPT4	Q9Y264	503 aa		4.59	□□□□□ -1.67
RACGAP1-223	ENST00000551260	HILPDA	Q9Y5L2	63 aa		4.59	□□□□□ -1.67
RACGAP1-223	ENST00000551260		A0A1W2PPL8	197 aa		4.58	□□□□□ -1.68
RACGAP1-223	ENST00000551260	CXorf65	A6NEN9	183 aa		4.58	□□□□□ -1.68
RACGAP1-223	ENST00000551260	AZIN1	O14977	448 aa		4.58	□□□□□ -1.68
RACGAP1-223	ENST00000551260	LYPLA1	O75608	230 aa	Predicted RBP	4.58	□□□□□ -1.68
RACGAP1-223	ENST00000551260	ARG1	P05089	322 aa		4.58	□□□□□ -1.68
RACGAP1-223	ENST00000551260	BCHE	P06276	602 aa		4.58	□□□□□ -1.68
RACGAP1-223	ENST00000551260	COX5B	P10606	129 aa		4.58	□□□□□ -1.68

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