RNA–Protein interactions for RNA: ENST00000550914.6

PTCH1-221, Transcript of patched 1, humanhuman

TSL 2

Gene PTCH1, Length 630 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-221ENST00000550914 ZNF823P16415 610 aa10.63□□□□□ -0.71
PTCH1-221ENST00000550914 IER3P46695 156 aa10.63□□□□□ -0.71
PTCH1-221ENST00000550914 GSSP48637 474 aa10.63□□□□□ -0.71
PTCH1-221ENST00000550914 PSME3P61289 254 aa10.63□□□□□ -0.71
PTCH1-221ENST00000550914 ZNF92Q03936 586 aa10.63□□□□□ -0.71
PTCH1-221ENST00000550914 SRSF4Q08170 494 aaKnown RBP10.63□□□□□ -0.71
PTCH1-221ENST00000550914 TEX36Q5VZQ5 186 aa10.63□□□□□ -0.71
PTCH1-221ENST00000550914 SFRP4Q6FHJ7 346 aaPredicted RBP10.63□□□□□ -0.71
PTCH1-221ENST00000550914 FAM86B1Q8N7N1 296 aa10.63□□□□□ -0.71
PTCH1-221ENST00000550914 OR4C15Q8NGM1 316 aa10.63□□□□□ -0.71
PTCH1-221ENST00000550914 CMTM5Q96DZ9 223 aa10.63□□□□□ -0.71
PTCH1-221ENST00000550914 SPAG4Q9NPE6 437 aa10.63□□□□□ -0.71
PTCH1-221ENST00000550914 C14orf119Q9NWQ9 140 aa10.63□□□□□ -0.71
PTCH1-221ENST00000550914 RNF114Q9Y508 228 aa10.63□□□□□ -0.71
PTCH1-221ENST00000550914 KPTNQ9Y664 436 aa10.63□□□□□ -0.71
PTCH1-221ENST00000550914 OR10H3O60404 316 aa10.62□□□□□ -0.71
PTCH1-221ENST00000550914 GPR137BO60478 399 aa10.62□□□□□ -0.71
PTCH1-221ENST00000550914 SEMG1P04279 462 aa10.62□□□□□ -0.71
PTCH1-221ENST00000550914 DDOSTP39656 456 aa10.62□□□□□ -0.71
PTCH1-221ENST00000550914 SPIBQ01892 262 aa10.62□□□□□ -0.71
PTCH1-221ENST00000550914 KHDRBS1Q07666 443 aaKnown RBP eCLIP10.62□□□□□ -0.71
PTCH1-221ENST00000550914 TSPAN31Q12999 210 aa10.62□□□□□ -0.71
PTCH1-221ENST00000550914 SNAI3Q3KNW1 292 aa10.62□□□□□ -0.71
PTCH1-221ENST00000550914 ASPHD2Q6ICH7 369 aa10.62□□□□□ -0.71
PTCH1-221ENST00000550914 RPL13AP3Q6NVV1 102 aa10.62□□□□□ -0.71
PTCH1-221ENST00000550914 BTN2A1Q7KYR7 527 aa10.62□□□□□ -0.71
PTCH1-221ENST00000550914 FAM90A1Q86YD7 464 aa10.62□□□□□ -0.71
PTCH1-221ENST00000550914 GCSAMQ8N6F7 178 aa10.62□□□□□ -0.71
PTCH1-221ENST00000550914 BOLLQ8N9W6 283 aaKnown RBP10.62□□□□□ -0.71
PTCH1-221ENST00000550914 SDR9C7Q8NEX9 313 aa10.62□□□□□ -0.71
PTCH1-221ENST00000550914 OR2T4Q8NH00 348 aa10.62□□□□□ -0.71
PTCH1-221ENST00000550914 LINC01006Q8NI28 216 aa10.62□□□□□ -0.71
PTCH1-221ENST00000550914 NPRL2Q8WTW4 380 aa10.62□□□□□ -0.71
PTCH1-221ENST00000550914 LRTOMTQ8WZ04 291 aa10.62□□□□□ -0.71
PTCH1-221ENST00000550914 LHX4Q969G2 390 aa10.62□□□□□ -0.71
PTCH1-221ENST00000550914 PYURFQ96I23 114 aa10.62□□□□□ -0.71
PTCH1-221ENST00000550914 NSRP1Q9H0G5 558 aaKnown RBP10.62□□□□□ -0.71
PTCH1-221ENST00000550914 DPAGT1Q9H3H5 408 aa10.62□□□□□ -0.71
PTCH1-221ENST00000550914 FN3KQ9H479 309 aa10.62□□□□□ -0.71
PTCH1-221ENST00000550914 RNPEPL1Q9HAU8 725 aa10.62□□□□□ -0.71
PTCH1-221ENST00000550914 C1orf123Q9NWV4 160 aa10.62□□□□□ -0.71
PTCH1-221ENST00000550914 CD300AQ9UGN4 299 aa10.62□□□□□ -0.71
PTCH1-221ENST00000550914 A0A1B0GVI7 797 aa10.61□□□□□ -0.71
PTCH1-221ENST00000550914 BHLHE40O14503 412 aa10.61□□□□□ -0.71
PTCH1-221ENST00000550914 DVL1O14640 695 aa10.61□□□□□ -0.71
PTCH1-221ENST00000550914 GPR37O15354 613 aa10.61□□□□□ -0.71
PTCH1-221ENST00000550914 XRCC2O43543 280 aa10.61□□□□□ -0.71
PTCH1-221ENST00000550914 IGHV4-59P01825 116 aa10.61□□□□□ -0.71
PTCH1-221ENST00000550914 GYPAP02724 150 aa10.61□□□□□ -0.71
PTCH1-221ENST00000550914 MUC1P15941 1255 aaPredicted RBP10.61□□□□□ -0.71
PTCH1-221ENST00000550914 GRK5P34947 590 aa10.61□□□□□ -0.71
PTCH1-221ENST00000550914 PROK1P58294 105 aa10.61□□□□□ -0.71
PTCH1-221ENST00000550914 ARF6P62330 175 aa10.61□□□□□ -0.71
PTCH1-221ENST00000550914 HOXA4Q00056 320 aaPredicted RBP10.61□□□□□ -0.71
PTCH1-221ENST00000550914 TAF9Q16594 264 aa10.61□□□□□ -0.71
PTCH1-221ENST00000550914 PCK2Q16822 640 aa10.61□□□□□ -0.71
PTCH1-221ENST00000550914 CDONQ4KMG0 1287 aa10.61□□□□□ -0.71
PTCH1-221ENST00000550914 GLYATL3Q5SZD4 288 aa10.61□□□□□ -0.71
PTCH1-221ENST00000550914 METAP1DQ6UB28 335 aaPredicted RBP10.61□□□□□ -0.71
PTCH1-221ENST00000550914 GDPGP1Q6ZNW5 385 aa10.61□□□□□ -0.71
PTCH1-221ENST00000550914 ZSCAN4Q8NAM6 433 aaPredicted RBP10.61□□□□□ -0.71
PTCH1-221ENST00000550914 SCCPDHQ8NBX0 429 aa10.61□□□□□ -0.71
PTCH1-221ENST00000550914 PROKR2Q8NFJ6 384 aa10.61□□□□□ -0.71
PTCH1-221ENST00000550914 OR52L1Q8NGH7 329 aa10.61□□□□□ -0.71
PTCH1-221ENST00000550914 OR2AE1Q8NHA4 323 aa10.61□□□□□ -0.71
PTCH1-221ENST00000550914 GNPDA2Q8TDQ7 276 aa10.61□□□□□ -0.71
PTCH1-221ENST00000550914 UBE2FQ969M7 185 aa10.61□□□□□ -0.71
PTCH1-221ENST00000550914 SPSB4Q96A44 273 aa10.61□□□□□ -0.71
PTCH1-221ENST00000550914 MCUR1Q96AQ8 359 aa10.61□□□□□ -0.71
PTCH1-221ENST00000550914 DDOQ99489 341 aa10.61□□□□□ -0.71
PTCH1-221ENST00000550914 RBM4BQ9BQ04 359 aaKnown RBP10.61□□□□□ -0.71
PTCH1-221ENST00000550914 CNTD2Q9H8S5 307 aa10.61□□□□□ -0.71
PTCH1-221ENST00000550914 RPUSD1Q9UJJ7 312 aaKnown RBP10.61□□□□□ -0.71
PTCH1-221ENST00000550914 CAB39Q9Y376 341 aaPredicted RBP10.61□□□□□ -0.71
PTCH1-221ENST00000550914 A0A0U1RQK1 487 aa10.6□□□□□ -0.71
PTCH1-221ENST00000550914 hCG_1807616A0A1W2PRN6 198 aa10.6□□□□□ -0.71
PTCH1-221ENST00000550914 A6NLC8 198 aa10.6□□□□□ -0.71
PTCH1-221ENST00000550914 FCN3O75636 299 aa10.6□□□□□ -0.71
PTCH1-221ENST00000550914 TIPRLO75663 272 aa10.6□□□□□ -0.71
PTCH1-221ENST00000550914 GRPP07492 148 aa10.6□□□□□ -0.71
PTCH1-221ENST00000550914 PRDX6P30041 224 aa10.6□□□□□ -0.71
PTCH1-221ENST00000550914 KRTAP10-3P60369 221 aa10.6□□□□□ -0.71
PTCH1-221ENST00000550914 DBPQ10586 325 aaPredicted RBP10.6□□□□□ -0.71
PTCH1-221ENST00000550914 MICBQ29980 383 aa10.6□□□□□ -0.71
PTCH1-221ENST00000550914 TEX30Q5JUR7 227 aa10.6□□□□□ -0.71
PTCH1-221ENST00000550914 SLC35F1Q5T1Q4 408 aa10.6□□□□□ -0.71
PTCH1-221ENST00000550914 DCXRQ7Z4W1 244 aa10.6□□□□□ -0.71
PTCH1-221ENST00000550914 ZDHHC21Q8IVQ6 265 aa10.6□□□□□ -0.71
PTCH1-221ENST00000550914 LY6G5BQ8NDX9 201 aa10.6□□□□□ -0.71
PTCH1-221ENST00000550914 OR56B2PQ8NGI1 322 aa10.6□□□□□ -0.71
PTCH1-221ENST00000550914 KCNJ15Q99712 375 aa10.6□□□□□ -0.71
PTCH1-221ENST00000550914 COPS4Q9BT78 406 aa10.6□□□□□ -0.71
PTCH1-221ENST00000550914 RASSF4Q9H2L5 321 aa10.6□□□□□ -0.71
PTCH1-221ENST00000550914 C16orf95Q9H693 158 aa10.6□□□□□ -0.71
PTCH1-221ENST00000550914 ADA2Q9NZK5 511 aa10.6□□□□□ -0.71
PTCH1-221ENST00000550914 MAGEL2Q9UJ55 1249 aa10.6□□□□□ -0.71
PTCH1-221ENST00000550914 CDH10Q9Y6N8 788 aa10.6□□□□□ -0.71
PTCH1-221ENST00000550914 COMMD3-BMI1R4GMX3 469 aa10.6□□□□□ -0.71
PTCH1-221ENST00000550914 TET2Q6N021 2002 aaPredicted RBP10.6□□□□□ -0.71
PTCH1-221ENST00000550914 SLC22A31A6NKX4 558 aa10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms