RNA–Protein interactions for RNA: ENST00000550611.1

LIMA1-206, Transcript of LIM domain and actin binding 1, humanhuman

TSL 4

Gene LIMA1, Length 543 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMA1-206ENST00000550611 PLXNB1O43157 2135 aa2.93□□□□□ -1.94
LIMA1-206ENST00000550611 DNAH10Q8IVF4 4471 aa2.93□□□□□ -1.94
LIMA1-206ENST00000550611 TRAV36DV7A0A075B6V5 113 aa2.92□□□□□ -1.94
LIMA1-206ENST00000550611 LOC100509620A0A075B734 347 aa2.92□□□□□ -1.94
LIMA1-206ENST00000550611 IGHV3OR16-10A0A075B7F0 116 aa2.92□□□□□ -1.94
LIMA1-206ENST00000550611 TRBV5-7A0A0A0MS05 114 aa2.92□□□□□ -1.94
LIMA1-206ENST00000550611 A0A0G2JPF8 293 aa2.92□□□□□ -1.94
LIMA1-206ENST00000550611 LCE6AA0A183 80 aa2.92□□□□□ -1.94
LIMA1-206ENST00000550611 KIR2DS1A0A191URI9 304 aa2.92□□□□□ -1.94
LIMA1-206ENST00000550611 A0A1B0GUV1 79 aa2.92□□□□□ -1.94
LIMA1-206ENST00000550611 A0A1B0GWA3 101 aa2.92□□□□□ -1.94
LIMA1-206ENST00000550611 C5orf63A6NC05 138 aa2.92□□□□□ -1.94
LIMA1-206ENST00000550611 HNRNPCL2B2RXH8 293 aa2.92□□□□□ -1.94
LIMA1-206ENST00000550611 HNRNPCL3B7ZW38 293 aa2.92□□□□□ -1.94
LIMA1-206ENST00000550611 H0YL77 283 aa2.92□□□□□ -1.94
LIMA1-206ENST00000550611 COPEO14579 308 aa2.92□□□□□ -1.94
LIMA1-206ENST00000550611 SPRY3O43610 288 aa2.92□□□□□ -1.94
LIMA1-206ENST00000550611 MGRN1O60291 552 aa2.92□□□□□ -1.94
LIMA1-206ENST00000550611 TPST2O60704 377 aa2.92□□□□□ -1.94
LIMA1-206ENST00000550611 PTP4A3O75365 173 aa2.92□□□□□ -1.94
LIMA1-206ENST00000550611 E2F6O75461 281 aa2.92□□□□□ -1.94
LIMA1-206ENST00000550611 FSTL3O95633 263 aa2.92□□□□□ -1.94
LIMA1-206ENST00000550611 SHBGP04278 402 aa2.92□□□□□ -1.94
LIMA1-206ENST00000550611 MELTFP08582 738 aa2.92□□□□□ -1.94
LIMA1-206ENST00000550611 SBK2P0C263 348 aa2.92□□□□□ -1.94
LIMA1-206ENST00000550611 HNRNPCL4P0DMR1 293 aa2.92□□□□□ -1.94
LIMA1-206ENST00000550611 NR2F1P10589 423 aa2.92□□□□□ -1.94
LIMA1-206ENST00000550611 HTR2AP28223 471 aa2.92□□□□□ -1.94
LIMA1-206ENST00000550611 IL12AP29459 219 aa2.92□□□□□ -1.94
LIMA1-206ENST00000550611 TNFSF8P32971 234 aa2.92□□□□□ -1.94
LIMA1-206ENST00000550611 CHI3L1P36222 383 aaPredicted RBP2.92□□□□□ -1.94
LIMA1-206ENST00000550611 SERPINB5P36952 375 aa2.92□□□□□ -1.94
LIMA1-206ENST00000550611 MPV17P39210 176 aa2.92□□□□□ -1.94
LIMA1-206ENST00000550611 WNT5AP41221 380 aa2.92□□□□□ -1.94
LIMA1-206ENST00000550611 CDKN2CP42773 168 aa2.92□□□□□ -1.94
LIMA1-206ENST00000550611 GPR12P47775 334 aa2.92□□□□□ -1.94
LIMA1-206ENST00000550611 MNAT1P51948 309 aa2.92□□□□□ -1.94
LIMA1-206ENST00000550611 ZNF133P52736 654 aaPredicted RBP2.92□□□□□ -1.94
LIMA1-206ENST00000550611 BPIFB3P59826 476 aa2.92□□□□□ -1.94
LIMA1-206ENST00000550611 HPCAP84074 193 aa2.92□□□□□ -1.94
LIMA1-206ENST00000550611 HOXC5Q00444 222 aa2.92□□□□□ -1.94
LIMA1-206ENST00000550611 RBBP4Q09028 425 aa2.92□□□□□ -1.94
LIMA1-206ENST00000550611 PMS2P3Q13401 168 aa2.92□□□□□ -1.94
LIMA1-206ENST00000550611 ZMYND11Q15326 602 aa2.92□□□□□ -1.94
LIMA1-206ENST00000550611 HIST3H3Q16695 136 aa2.92□□□□□ -1.94
LIMA1-206ENST00000550611 DEFB121Q5J5C9 76 aa2.92□□□□□ -1.94
LIMA1-206ENST00000550611 SPANXN4Q5MJ08 99 aa2.92□□□□□ -1.94
LIMA1-206ENST00000550611 THEM4Q5T1C6 240 aa2.92□□□□□ -1.94
LIMA1-206ENST00000550611 HHATQ5VTY9 493 aa2.92□□□□□ -1.94
LIMA1-206ENST00000550611 CARD17Q5XLA6 110 aa2.92□□□□□ -1.94
LIMA1-206ENST00000550611 FIP1L1Q6UN15 594 aaKnown RBP2.92□□□□□ -1.94
LIMA1-206ENST00000550611 LRRN1Q6UXK5 716 aa2.92□□□□□ -1.94
LIMA1-206ENST00000550611 SYT10Q6XYQ8 523 aa2.92□□□□□ -1.94
LIMA1-206ENST00000550611 C17orf107Q6ZR85 190 aa2.92□□□□□ -1.94
LIMA1-206ENST00000550611 DPPA2Q7Z7J5 298 aa2.92□□□□□ -1.94
LIMA1-206ENST00000550611 COMTD1Q86VU5 262 aa2.92□□□□□ -1.94
LIMA1-206ENST00000550611 SNX32Q86XE0 403 aa2.92□□□□□ -1.94
LIMA1-206ENST00000550611 C1orf174Q8IYL3 243 aa2.92□□□□□ -1.94
LIMA1-206ENST00000550611 LRRC34Q8IZ02 419 aa2.92□□□□□ -1.94
LIMA1-206ENST00000550611 C4orf33Q8N1A6 199 aa2.92□□□□□ -1.94
LIMA1-206ENST00000550611 PARP8Q8N3A8 854 aa2.92□□□□□ -1.94
LIMA1-206ENST00000550611 C17orf53Q8N3J3 647 aaPredicted RBP2.92□□□□□ -1.94
LIMA1-206ENST00000550611 CCDC63Q8NA47 563 aa2.92□□□□□ -1.94
LIMA1-206ENST00000550611 ZSCAN4Q8NAM6 433 aaPredicted RBP2.92□□□□□ -1.94
LIMA1-206ENST00000550611 TMEM116Q8NCL8 245 aa2.92□□□□□ -1.94
LIMA1-206ENST00000550611 OR10S1Q8NGN2 331 aa2.92□□□□□ -1.94
LIMA1-206ENST00000550611 OR1J2Q8NGS2 313 aa2.92□□□□□ -1.94
LIMA1-206ENST00000550611 OR6X1Q8NH79 312 aa2.92□□□□□ -1.94
LIMA1-206ENST00000550611 KLF14Q8TD94 323 aaPredicted RBP2.92□□□□□ -1.94
LIMA1-206ENST00000550611 SLC38A5Q8WUX1 472 aa2.92□□□□□ -1.94
LIMA1-206ENST00000550611 SLC38A4Q969I6 547 aa2.92□□□□□ -1.94
LIMA1-206ENST00000550611 TUBGCP3Q96CW5 907 aa2.92□□□□□ -1.94
LIMA1-206ENST00000550611 RNF183Q96D59 192 aa2.92□□□□□ -1.94
LIMA1-206ENST00000550611 POM121L2Q96KW2 1035 aa2.92□□□□□ -1.94
LIMA1-206ENST00000550611 SAMD8Q96LT4 415 aa2.92□□□□□ -1.94
LIMA1-206ENST00000550611 SEPHS2Q99611 448 aa2.92□□□□□ -1.94
LIMA1-206ENST00000550611 NUDT16L1Q9BRJ7 211 aaKnown RBP2.92□□□□□ -1.94
LIMA1-206ENST00000550611 CENPOQ9BU64 300 aa2.92□□□□□ -1.94
LIMA1-206ENST00000550611 MRPL13Q9BYD1 178 aaKnown RBP2.92□□□□□ -1.94
LIMA1-206ENST00000550611 ULBP2Q9BZM5 246 aa2.92□□□□□ -1.94
LIMA1-206ENST00000550611 CHIAQ9BZP6 476 aa2.92□□□□□ -1.94
LIMA1-206ENST00000550611 GHITMQ9H3K2 345 aa2.92□□□□□ -1.94
LIMA1-206ENST00000550611 C1orf198Q9H425 327 aa2.92□□□□□ -1.94
LIMA1-206ENST00000550611 C16orf95Q9H693 158 aa2.92□□□□□ -1.94
LIMA1-206ENST00000550611 FN3KRPQ9HA64 309 aa2.92□□□□□ -1.94
LIMA1-206ENST00000550611 TMEM165Q9HC07 324 aa2.92□□□□□ -1.94
LIMA1-206ENST00000550611 BCL2L10Q9HD36 194 aa2.92□□□□□ -1.94
LIMA1-206ENST00000550611 A4GALTQ9NPC4 353 aa2.92□□□□□ -1.94
LIMA1-206ENST00000550611 B3GAT2Q9NPZ5 323 aa2.92□□□□□ -1.94
LIMA1-206ENST00000550611 TMEM106BQ9NUM4 274 aa2.92□□□□□ -1.94
LIMA1-206ENST00000550611 TMEM38BQ9NVV0 291 aa2.92□□□□□ -1.94
LIMA1-206ENST00000550611 MRPL39Q9NYK5 338 aaKnown RBP2.92□□□□□ -1.94
LIMA1-206ENST00000550611 TAS2R5Q9NYW4 299 aa2.92□□□□□ -1.94
LIMA1-206ENST00000550611 UBAP1Q9NZ09 502 aa2.92□□□□□ -1.94
LIMA1-206ENST00000550611 GLTPQ9NZD2 209 aa2.92□□□□□ -1.94
LIMA1-206ENST00000550611 CALML5Q9NZT1 146 aa2.92□□□□□ -1.94
LIMA1-206ENST00000550611 IL20RAQ9UHF4 553 aa2.92□□□□□ -1.94
LIMA1-206ENST00000550611 KCNG2Q9UJ96 466 aa2.92□□□□□ -1.94
LIMA1-206ENST00000550611 IFT52Q9Y366 437 aa2.92□□□□□ -1.94
LIMA1-206ENST00000550611 POMT1Q9Y6A1 747 aa2.92□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms