RNA–Protein interactions for RNA: ENST00000550220.1

VTI1BP3-201, Transcript of vesicle transport through interaction with t-SNAREs 1B pseudogene 3, humanhuman

BASIC

Gene VTI1BP3, Length 636 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1BP3-201ENST00000550220 PAICSP22234 425 aaKnown RBP9.09□□□□□ -0.95
VTI1BP3-201ENST00000550220 HSD11B1P28845 292 aa9.09□□□□□ -0.95
VTI1BP3-201ENST00000550220 PSMB10P40306 273 aa9.09□□□□□ -0.95
VTI1BP3-201ENST00000550220 GYS2P54840 703 aa9.09□□□□□ -0.95
VTI1BP3-201ENST00000550220 PAX2Q02962 417 aa9.09□□□□□ -0.95
VTI1BP3-201ENST00000550220 BAMBIQ13145 260 aa9.09□□□□□ -0.95
VTI1BP3-201ENST00000550220 CRMP1Q14194 572 aa9.09□□□□□ -0.95
VTI1BP3-201ENST00000550220 SNAI3Q3KNW1 292 aa9.09□□□□□ -0.95
VTI1BP3-201ENST00000550220 KLF17Q5JT82 389 aaPredicted RBP9.09□□□□□ -0.95
VTI1BP3-201ENST00000550220 WDR25Q64LD2 544 aaPredicted RBP9.09□□□□□ -0.95
VTI1BP3-201ENST00000550220 SHFQ7M4L6 423 aa9.09□□□□□ -0.95
VTI1BP3-201ENST00000550220 PARP8Q8N3A8 854 aa9.09□□□□□ -0.95
VTI1BP3-201ENST00000550220 FTMTQ8N4E7 242 aa9.09□□□□□ -0.95
VTI1BP3-201ENST00000550220 ZNF511Q8NB15 262 aa9.09□□□□□ -0.95
VTI1BP3-201ENST00000550220 OR10G2Q8NGC3 310 aa9.09□□□□□ -0.95
VTI1BP3-201ENST00000550220 OR51L1Q8NGJ5 315 aa9.09□□□□□ -0.95
VTI1BP3-201ENST00000550220 OR10S1Q8NGN2 331 aa9.09□□□□□ -0.95
VTI1BP3-201ENST00000550220 OR9Q1Q8NGQ5 310 aa9.09□□□□□ -0.95
VTI1BP3-201ENST00000550220 OR6K6Q8NGW6 343 aa9.09□□□□□ -0.95
VTI1BP3-201ENST00000550220 TEX47Q8TBZ9 253 aa9.09□□□□□ -0.95
VTI1BP3-201ENST00000550220 ITFG2Q969R8 447 aa9.09□□□□□ -0.95
VTI1BP3-201ENST00000550220 SPSB4Q96A44 273 aa9.09□□□□□ -0.95
VTI1BP3-201ENST00000550220 INTS14Q96SY0 518 aa9.09□□□□□ -0.95
VTI1BP3-201ENST00000550220 NUDT16L1Q9BRJ7 211 aaKnown RBP9.09□□□□□ -0.95
VTI1BP3-201ENST00000550220 ADAT1Q9BUB4 502 aaKnown RBP9.09□□□□□ -0.95
VTI1BP3-201ENST00000550220 RGCCQ9H4X1 137 aa9.09□□□□□ -0.95
VTI1BP3-201ENST00000550220 YY1AP1Q9H869 796 aa9.09□□□□□ -0.95
VTI1BP3-201ENST00000550220 CMC2Q9NRP2 79 aa9.09□□□□□ -0.95
VTI1BP3-201ENST00000550220 UFSP2Q9NUQ7 469 aa9.09□□□□□ -0.95
VTI1BP3-201ENST00000550220 U3KQV3 271 aa9.09□□□□□ -0.95
VTI1BP3-201ENST00000550220 H3BN98 237 aa9.08□□□□□ -0.96
VTI1BP3-201ENST00000550220 GNGT2O14610 69 aa9.08□□□□□ -0.96
VTI1BP3-201ENST00000550220 TIPRLO75663 272 aa9.08□□□□□ -0.96
VTI1BP3-201ENST00000550220 ECDO95905 644 aaPredicted RBP9.08□□□□□ -0.96
VTI1BP3-201ENST00000550220 GSTT1P30711 240 aa9.08□□□□□ -0.96
VTI1BP3-201ENST00000550220 PRKXP51817 358 aa9.08□□□□□ -0.96
VTI1BP3-201ENST00000550220 MS4A2Q01362 244 aa9.08□□□□□ -0.96
VTI1BP3-201ENST00000550220 OR8B8Q15620 311 aa9.08□□□□□ -0.96
VTI1BP3-201ENST00000550220 AWAT1Q58HT5 328 aa9.08□□□□□ -0.96
VTI1BP3-201ENST00000550220 GLYATL3Q5SZD4 288 aa9.08□□□□□ -0.96
VTI1BP3-201ENST00000550220 ZNF454Q8N9F8 522 aa9.08□□□□□ -0.96
VTI1BP3-201ENST00000550220 PNLDC1Q8NA58 520 aaKnown RBP9.08□□□□□ -0.96
VTI1BP3-201ENST00000550220 CSNK2A3Q8NEV1 391 aa9.08□□□□□ -0.96
VTI1BP3-201ENST00000550220 OR8D4Q8NGM9 314 aa9.08□□□□□ -0.96
VTI1BP3-201ENST00000550220 OR8S1Q8NH09 359 aa9.08□□□□□ -0.96
VTI1BP3-201ENST00000550220 GIPC3Q8TF64 312 aa9.08□□□□□ -0.96
VTI1BP3-201ENST00000550220 DACT3Q96B18 629 aaPredicted RBP9.08□□□□□ -0.96
VTI1BP3-201ENST00000550220 FEVQ99581 238 aa9.08□□□□□ -0.96
VTI1BP3-201ENST00000550220 CHID1Q9BWS9 393 aa9.08□□□□□ -0.96
VTI1BP3-201ENST00000550220 ZNF556Q9HAH1 456 aa9.08□□□□□ -0.96
VTI1BP3-201ENST00000550220 RNPEPL1Q9HAU8 725 aa9.08□□□□□ -0.96
VTI1BP3-201ENST00000550220 ESM1Q9NQ30 184 aa9.08□□□□□ -0.96
VTI1BP3-201ENST00000550220 IGHV3-64DA0A0J9YX35 117 aa9.07□□□□□ -0.96
VTI1BP3-201ENST00000550220 DHRS12A0PJE2 317 aa9.07□□□□□ -0.96
VTI1BP3-201ENST00000550220 OOEPA6NGQ2 149 aa9.07□□□□□ -0.96
VTI1BP3-201ENST00000550220 AQP12BA6NM10 295 aa9.07□□□□□ -0.96
VTI1BP3-201ENST00000550220 POM121CA8CG34 1229 aa9.07□□□□□ -0.96
VTI1BP3-201ENST00000550220 P2RY10O00398 339 aa9.07□□□□□ -0.96
VTI1BP3-201ENST00000550220 GLCEO94923 617 aa9.07□□□□□ -0.96
VTI1BP3-201ENST00000550220 SOX14O95416 240 aa9.07□□□□□ -0.96
VTI1BP3-201ENST00000550220 PLATP00750 562 aa9.07□□□□□ -0.96
VTI1BP3-201ENST00000550220 CST1P01037 141 aa9.07□□□□□ -0.96
VTI1BP3-201ENST00000550220 HMGN1P05114 100 aa9.07□□□□□ -0.96
VTI1BP3-201ENST00000550220 ANXA2P07355 339 aaKnown RBP9.07□□□□□ -0.96
VTI1BP3-201ENST00000550220 RNASE1P07998 156 aaKnown RBP9.07□□□□□ -0.96
VTI1BP3-201ENST00000550220 RPS27P42677 84 aaKnown RBP9.07□□□□□ -0.96
VTI1BP3-201ENST00000550220 CX3CR1P49238 355 aa9.07□□□□□ -0.96
VTI1BP3-201ENST00000550220 IL13RA1P78552 427 aa9.07□□□□□ -0.96
VTI1BP3-201ENST00000550220 EIF2B1Q14232 305 aaKnown RBP9.07□□□□□ -0.96
VTI1BP3-201ENST00000550220 MPPED2Q15777 294 aa9.07□□□□□ -0.96
VTI1BP3-201ENST00000550220 TIGD6Q17RP2 521 aa9.07□□□□□ -0.96
VTI1BP3-201ENST00000550220 LINC01590Q5TEZ4 76 aa9.07□□□□□ -0.96
VTI1BP3-201ENST00000550220 GPR157Q5UAW9 335 aa9.07□□□□□ -0.96
VTI1BP3-201ENST00000550220 PRAMEF6Q5VXH4 476 aa9.07□□□□□ -0.96
VTI1BP3-201ENST00000550220 SHISA2Q6UWI4 295 aa9.07□□□□□ -0.96
VTI1BP3-201ENST00000550220 HIST2H2ABQ8IUE6 130 aaPredicted RBP9.07□□□□□ -0.96
VTI1BP3-201ENST00000550220 AQP12AQ8IXF9 295 aa9.07□□□□□ -0.96
VTI1BP3-201ENST00000550220 OR4Q3Q8NH05 313 aa9.07□□□□□ -0.96
VTI1BP3-201ENST00000550220 OR2AE1Q8NHA4 323 aa9.07□□□□□ -0.96
VTI1BP3-201ENST00000550220 RNF133Q8WVZ7 376 aa9.07□□□□□ -0.96
VTI1BP3-201ENST00000550220 ZNRF4Q8WWF5 429 aa9.07□□□□□ -0.96
VTI1BP3-201ENST00000550220 DMRTB1Q96MA1 342 aa9.07□□□□□ -0.96
VTI1BP3-201ENST00000550220 ZNF747Q9BV97 191 aa9.07□□□□□ -0.96
VTI1BP3-201ENST00000550220 OR10A2Q9H208 303 aa9.07□□□□□ -0.96
VTI1BP3-201ENST00000550220 MMADHCQ9H3L0 296 aaPredicted RBP9.07□□□□□ -0.96
VTI1BP3-201ENST00000550220 NIPAL2Q9H841 368 aa9.07□□□□□ -0.96
VTI1BP3-201ENST00000550220 MARCH7Q9H992 704 aa9.07□□□□□ -0.96
VTI1BP3-201ENST00000550220 ABCB9Q9NP78 766 aa9.07□□□□□ -0.96
VTI1BP3-201ENST00000550220 NOX4Q9NPH5 578 aa9.07□□□□□ -0.96
VTI1BP3-201ENST00000550220 ARMC1Q9NVT9 282 aa9.07□□□□□ -0.96
VTI1BP3-201ENST00000550220 C1orf123Q9NWV4 160 aa9.07□□□□□ -0.96
VTI1BP3-201ENST00000550220 ZNF391Q9UJN7 358 aa9.07□□□□□ -0.96
VTI1BP3-201ENST00000550220 N6AMT1Q9Y5N5 214 aa9.07□□□□□ -0.96
VTI1BP3-201ENST00000550220 TANC2Q9HCD6 1990 aa9.06□□□□□ -0.96
VTI1BP3-201ENST00000550220 DNAJC9-AS1A6NH13 148 aa9.06□□□□□ -0.96
VTI1BP3-201ENST00000550220 A6NLC8 198 aa9.06□□□□□ -0.96
VTI1BP3-201ENST00000550220 ANXA2P2A6NMY6 339 aa9.06□□□□□ -0.96
VTI1BP3-201ENST00000550220 GPR37O15354 613 aa9.06□□□□□ -0.96
VTI1BP3-201ENST00000550220 TBX1O43435 398 aa9.06□□□□□ -0.96
VTI1BP3-201ENST00000550220 LHBP01229 141 aa9.06□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms