RNA–Protein interactions for RNA: ENST00000548823.1

CTDSP2-204, Transcript of CTD small phosphatase 2, humanhuman

TSL 1 (best) BASIC

Gene CTDSP2, Length 1,368 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP2-204ENST00000548823 NPR2P20594 1047 aa17.38■□□□□ 0.37
CTDSP2-204ENST00000548823 ATP5J2P56134 94 aa17.38■□□□□ 0.37
CTDSP2-204ENST00000548823 CLDN15P56746 228 aa17.38■□□□□ 0.37
CTDSP2-204ENST00000548823 CARD17Q5XLA6 110 aa17.38■□□□□ 0.37
CTDSP2-204ENST00000548823 ZNF704Q6ZNC4 412 aaPredicted RBP17.38■□□□□ 0.37
CTDSP2-204ENST00000548823 HIST2H2ABQ8IUE6 130 aaPredicted RBP17.38■□□□□ 0.37
CTDSP2-204ENST00000548823 SNX29P2Q8IUI4 249 aa17.38■□□□□ 0.37
CTDSP2-204ENST00000548823 LINC00346Q8IVM7 164 aa17.38■□□□□ 0.37
CTDSP2-204ENST00000548823 G6PC2Q9NQR9 355 aa17.38■□□□□ 0.37
CTDSP2-204ENST00000548823 RABL2AQ9UBK7 228 aaPredicted RBP17.38■□□□□ 0.37
CTDSP2-204ENST00000548823 GDF2Q9UK05 429 aaPredicted RBP17.38■□□□□ 0.37
CTDSP2-204ENST00000548823 RABL2BQ9UNT1 228 aa17.38■□□□□ 0.37
CTDSP2-204ENST00000548823 LHFPL6Q9Y693 200 aa17.38■□□□□ 0.37
CTDSP2-204ENST00000548823 MED12LQ86YW9 2145 aa17.38■□□□□ 0.37
CTDSP2-204ENST00000548823 IGHV3-15A0A0B4J1V0 119 aa17.37■□□□□ 0.37
CTDSP2-204ENST00000548823 ZNF878C9JN71 531 aa17.37■□□□□ 0.37
CTDSP2-204ENST00000548823 DHHO43323 396 aa17.37■□□□□ 0.37
CTDSP2-204ENST00000548823 WNT11O96014 354 aa17.37■□□□□ 0.37
CTDSP2-204ENST00000548823 FAM157CP0CG43 387 aa17.37■□□□□ 0.37
CTDSP2-204ENST00000548823 ACHEP22303 614 aa17.37■□□□□ 0.37
CTDSP2-204ENST00000548823 CFPP27918 469 aa17.37■□□□□ 0.37
CTDSP2-204ENST00000548823 GUCA1AP43080 201 aaPredicted RBP17.37■□□□□ 0.37
CTDSP2-204ENST00000548823 LHX2P50458 406 aa17.37■□□□□ 0.37
CTDSP2-204ENST00000548823 TMEM244Q5VVB8 128 aa17.37■□□□□ 0.37
CTDSP2-204ENST00000548823 OTPQ5XKR4 325 aa17.37■□□□□ 0.37
CTDSP2-204ENST00000548823 STAC2Q6ZMT1 411 aa17.37■□□□□ 0.37
CTDSP2-204ENST00000548823 ABTB1Q969K4 478 aaPredicted RBP17.37■□□□□ 0.37
CTDSP2-204ENST00000548823 TMEM45BQ96B21 275 aa17.37■□□□□ 0.37
CTDSP2-204ENST00000548823 HS3ST6Q96QI5 342 aa17.37■□□□□ 0.37
CTDSP2-204ENST00000548823 REG4Q9BYZ8 158 aa17.37■□□□□ 0.37
CTDSP2-204ENST00000548823 NELFAQ9H3P2 528 aa17.37■□□□□ 0.37
CTDSP2-204ENST00000548823 MOB1AQ9H8S9 216 aa17.37■□□□□ 0.37
CTDSP2-204ENST00000548823 SEC61A2Q9H9S3 476 aa17.37■□□□□ 0.37
CTDSP2-204ENST00000548823 TCF7L1Q9HCS4 588 aa17.37■□□□□ 0.37
CTDSP2-204ENST00000548823 SPATA2Q9UM82 520 aa17.37■□□□□ 0.37
CTDSP2-204ENST00000548823 V9GY05 133 aa17.37■□□□□ 0.37
CTDSP2-204ENST00000548823 ROS1P08922 2347 aa17.37■□□□□ 0.37
CTDSP2-204ENST00000548823 IGKV3D-15A0A087WSY6 115 aa17.36■□□□□ 0.37
CTDSP2-204ENST00000548823 A0A1W2PPK0 400 aa17.36■□□□□ 0.37
CTDSP2-204ENST00000548823 H0YC42 278 aa17.36■□□□□ 0.37
CTDSP2-204ENST00000548823 AIPO00170 330 aa17.36■□□□□ 0.37
CTDSP2-204ENST00000548823 SLC43A1O75387 559 aa17.36■□□□□ 0.37
CTDSP2-204ENST00000548823 ACTL6AO96019 429 aa17.36■□□□□ 0.37
CTDSP2-204ENST00000548823 APOA1P02647 267 aa17.36■□□□□ 0.37
CTDSP2-204ENST00000548823 UBCP0CG48 685 aaKnown RBP17.36■□□□□ 0.37
CTDSP2-204ENST00000548823 ZNF708P17019 499 aa17.36■□□□□ 0.37
CTDSP2-204ENST00000548823 ATF1P18846 271 aa17.36■□□□□ 0.37
CTDSP2-204ENST00000548823 MSR1P21757 451 aa17.36■□□□□ 0.37
CTDSP2-204ENST00000548823 EIF1AXP47813 144 aaKnown RBP17.36■□□□□ 0.37
CTDSP2-204ENST00000548823 STARP49675 285 aa17.36■□□□□ 0.37
CTDSP2-204ENST00000548823 ZNF84P51523 738 aa17.36■□□□□ 0.37
CTDSP2-204ENST00000548823 SCAND1P57086 179 aa17.36■□□□□ 0.37
CTDSP2-204ENST00000548823 MFGE8Q08431 387 aaPredicted RBP17.36■□□□□ 0.37
CTDSP2-204ENST00000548823 FAM27E3Q08E93 113 aa17.36■□□□□ 0.37
CTDSP2-204ENST00000548823 CLEC12BQ2HXU8 276 aa17.36■□□□□ 0.37
CTDSP2-204ENST00000548823 KLHL24Q6TFL4 600 aa17.36■□□□□ 0.37
CTDSP2-204ENST00000548823 LRRTM1Q86UE6 522 aa17.36■□□□□ 0.37
CTDSP2-204ENST00000548823 OR10S1Q8NGN2 331 aa17.36■□□□□ 0.37
CTDSP2-204ENST00000548823 TRMT10AQ8TBZ6 339 aaKnown RBP17.36■□□□□ 0.37
CTDSP2-204ENST00000548823 KCNJ15Q99712 375 aa17.36■□□□□ 0.37
CTDSP2-204ENST00000548823 OR52A1Q9UKL2 312 aa17.36■□□□□ 0.37
CTDSP2-204ENST00000548823 AK6Q9Y3D8 172 aaKnown RBP17.36■□□□□ 0.37
CTDSP2-204ENST00000548823 TMEM269A0A1B0GVZ9 245 aa17.35■□□□□ 0.37
CTDSP2-204ENST00000548823 IFITM5A6NNB3 132 aa17.35■□□□□ 0.37
CTDSP2-204ENST00000548823 ELK1P19419 428 aa17.35■□□□□ 0.37
CTDSP2-204ENST00000548823 FSTP19883 344 aa17.35■□□□□ 0.37
CTDSP2-204ENST00000548823 LOXP28300 417 aaPredicted RBP17.35■□□□□ 0.37
CTDSP2-204ENST00000548823 CLDN18P56856 261 aa17.35■□□□□ 0.37
CTDSP2-204ENST00000548823 HIST1H3AP68431 136 aa17.35■□□□□ 0.37
CTDSP2-204ENST00000548823 MRPS34P82930 218 aaKnown RBP17.35■□□□□ 0.37
CTDSP2-204ENST00000548823 HIST2H3PS2Q5TEC6 136 aa17.35■□□□□ 0.37
CTDSP2-204ENST00000548823 HIST2H3AQ71DI3 136 aa17.35■□□□□ 0.37
CTDSP2-204ENST00000548823 OR8H2Q8N162 312 aa17.35■□□□□ 0.37
CTDSP2-204ENST00000548823 POC5Q8NA72 575 aa17.35■□□□□ 0.37
CTDSP2-204ENST00000548823 TMEM106AQ96A25 262 aa17.35■□□□□ 0.37
CTDSP2-204ENST00000548823 GFI1Q99684 422 aa17.35■□□□□ 0.37
CTDSP2-204ENST00000548823 RNF122Q9H9V4 155 aa17.35■□□□□ 0.37
CTDSP2-204ENST00000548823 EMC7Q9NPA0 242 aa17.35■□□□□ 0.37
CTDSP2-204ENST00000548823 B3GAT2Q9NPZ5 323 aa17.35■□□□□ 0.37
CTDSP2-204ENST00000548823 CENPMQ9NSP4 180 aa17.35■□□□□ 0.37
CTDSP2-204ENST00000548823 HHLA2Q9UM44 414 aa17.35■□□□□ 0.37
CTDSP2-204ENST00000548823 FOXJ3Q9UPW0 622 aa17.35■□□□□ 0.37
CTDSP2-204ENST00000548823 SLC22A13Q9Y226 551 aa17.35■□□□□ 0.37
CTDSP2-204ENST00000548823 POLR1DQ9Y2S0 133 aa17.35■□□□□ 0.37
CTDSP2-204ENST00000548823 FAM25AB3EWG3 89 aa17.34■□□□□ 0.37
CTDSP2-204ENST00000548823 FAM25CB3EWG5 89 aa17.34■□□□□ 0.37
CTDSP2-204ENST00000548823 FAM25GB3EWG6 89 aa17.34■□□□□ 0.37
CTDSP2-204ENST00000548823 MSTNO14793 375 aa17.34■□□□□ 0.37
CTDSP2-204ENST00000548823 HLA-DQB1P01920 261 aa17.34■□□□□ 0.37
CTDSP2-204ENST00000548823 CD2P06729 351 aa17.34■□□□□ 0.37
CTDSP2-204ENST00000548823 CALCBP10092 127 aa17.34■□□□□ 0.37
CTDSP2-204ENST00000548823 CD37P11049 281 aa17.34■□□□□ 0.37
CTDSP2-204ENST00000548823 SLC2A2P11168 524 aaPredicted RBP17.34■□□□□ 0.37
CTDSP2-204ENST00000548823 IL7P13232 177 aa17.34■□□□□ 0.37
CTDSP2-204ENST00000548823 TALDO1P37837 337 aa17.34■□□□□ 0.37
CTDSP2-204ENST00000548823 SELENOPP49908 381 aa17.34■□□□□ 0.37
CTDSP2-204ENST00000548823 SCN1BQ07699 218 aa17.34■□□□□ 0.37
CTDSP2-204ENST00000548823 STK11Q15831 433 aa17.34■□□□□ 0.37
CTDSP2-204ENST00000548823 PHYHD1Q5SRE7 291 aa17.34■□□□□ 0.37
CTDSP2-204ENST00000548823 CORO6Q6QEF8 472 aa17.34■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms