RNA–Protein interactions for RNA: ENST00000548420.1

PTCH1-217, Transcript of patched 1, humanhuman

TSL 5

Gene PTCH1, Length 553 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-217ENST00000548420 BLVRAP53004 296 aa11.71□□□□□ -0.53
PTCH1-217ENST00000548420 CCL8P80075 99 aa11.71□□□□□ -0.53
PTCH1-217ENST00000548420 MVKQ03426 396 aa11.71□□□□□ -0.53
PTCH1-217ENST00000548420 C2orf68Q2NKX9 166 aa11.71□□□□□ -0.53
PTCH1-217ENST00000548420 FAM209AQ5JX71 171 aa11.71□□□□□ -0.53
PTCH1-217ENST00000548420 TMEM154Q6P9G4 183 aa11.71□□□□□ -0.53
PTCH1-217ENST00000548420 FBXW12Q6X9E4 464 aa11.71□□□□□ -0.53
PTCH1-217ENST00000548420 ATG16L2Q8NAA4 619 aa11.71□□□□□ -0.53
PTCH1-217ENST00000548420 ZNF511Q8NB15 262 aa11.71□□□□□ -0.53
PTCH1-217ENST00000548420 OR2AJ1Q8NGZ0 328 aa11.71□□□□□ -0.53
PTCH1-217ENST00000548420 LINC01006Q8NI28 216 aa11.71□□□□□ -0.53
PTCH1-217ENST00000548420 SNX33Q8WV41 574 aa11.71□□□□□ -0.53
PTCH1-217ENST00000548420 PPP1R14AQ96A00 147 aa11.71□□□□□ -0.53
PTCH1-217ENST00000548420 APOBEC3DQ96AK3 386 aaPredicted RBP11.71□□□□□ -0.53
PTCH1-217ENST00000548420 PITX2Q99697 317 aa11.71□□□□□ -0.53
PTCH1-217ENST00000548420 ATF6BQ99941 703 aa11.71□□□□□ -0.53
PTCH1-217ENST00000548420 SLC25A19Q9HC21 320 aa11.71□□□□□ -0.53
PTCH1-217ENST00000548420 TET2Q6N021 2002 aaPredicted RBP11.7□□□□□ -0.54
PTCH1-217ENST00000548420 ZSCAN5BA6NJL1 495 aa11.7□□□□□ -0.54
PTCH1-217ENST00000548420 ZNF593O00488 134 aaPredicted RBP11.7□□□□□ -0.54
PTCH1-217ENST00000548420 IGHV1-46P01743 117 aa11.7□□□□□ -0.54
PTCH1-217ENST00000548420 MT-ND5P03915 603 aa11.7□□□□□ -0.54
PTCH1-217ENST00000548420 CD55P08174 381 aa11.7□□□□□ -0.54
PTCH1-217ENST00000548420 FASP25445 335 aa11.7□□□□□ -0.54
PTCH1-217ENST00000548420 POU1F1P28069 291 aa11.7□□□□□ -0.54
PTCH1-217ENST00000548420 RPS27P42677 84 aaKnown RBP11.7□□□□□ -0.54
PTCH1-217ENST00000548420 CRYBB2P43320 205 aa11.7□□□□□ -0.54
PTCH1-217ENST00000548420 ENTPD1P49961 510 aa11.7□□□□□ -0.54
PTCH1-217ENST00000548420 CDK5R2Q13319 367 aa11.7□□□□□ -0.54
PTCH1-217ENST00000548420 ARMCX4Q5H9R4 360 aa11.7□□□□□ -0.54
PTCH1-217ENST00000548420 FIP1L1Q6UN15 594 aaKnown RBP11.7□□□□□ -0.54
PTCH1-217ENST00000548420 CCDC121Q6ZUS5 278 aa11.7□□□□□ -0.54
PTCH1-217ENST00000548420 OR5L1Q8NGL2 311 aa11.7□□□□□ -0.54
PTCH1-217ENST00000548420 SGCDQ92629 289 aa11.7□□□□□ -0.54
PTCH1-217ENST00000548420 CMBLQ96DG6 245 aa11.7□□□□□ -0.54
PTCH1-217ENST00000548420 DIRC2Q96SL1 478 aa11.7□□□□□ -0.54
PTCH1-217ENST00000548420 MED20Q9H944 212 aa11.7□□□□□ -0.54
PTCH1-217ENST00000548420 MMP26Q9NRE1 261 aa11.7□□□□□ -0.54
PTCH1-217ENST00000548420 TNFRSF19Q9NS68 423 aa11.7□□□□□ -0.54
PTCH1-217ENST00000548420 PURGQ9UJV8 347 aaKnown RBP11.7□□□□□ -0.54
PTCH1-217ENST00000548420 ZDHHC8Q9ULC8 765 aa11.7□□□□□ -0.54
PTCH1-217ENST00000548420 A0A1B0GWJ7 208 aa11.69□□□□□ -0.54
PTCH1-217ENST00000548420 PLSCR5A0PG75 271 aa11.69□□□□□ -0.54
PTCH1-217ENST00000548420 FAM183AA6NL82 134 aa11.69□□□□□ -0.54
PTCH1-217ENST00000548420 H0YL77 283 aa11.69□□□□□ -0.54
PTCH1-217ENST00000548420 GLCEO94923 617 aa11.69□□□□□ -0.54
PTCH1-217ENST00000548420 FCGR1AP12314 374 aa11.69□□□□□ -0.54
PTCH1-217ENST00000548420 CRISP1P54107 249 aa11.69□□□□□ -0.54
PTCH1-217ENST00000548420 ACTR3P61158 418 aa11.69□□□□□ -0.54
PTCH1-217ENST00000548420 ESRRGP62508 458 aa11.69□□□□□ -0.54
PTCH1-217ENST00000548420 LCN2P80188 198 aa11.69□□□□□ -0.54
PTCH1-217ENST00000548420 EFNB1P98172 346 aa11.69□□□□□ -0.54
PTCH1-217ENST00000548420 TMEM236Q5W0B7 351 aa11.69□□□□□ -0.54
PTCH1-217ENST00000548420 KDM4DQ6B0I6 523 aa11.69□□□□□ -0.54
PTCH1-217ENST00000548420 Q6ZR03 302 aa11.69□□□□□ -0.54
PTCH1-217ENST00000548420 AMIGO2Q86SJ2 522 aa11.69□□□□□ -0.54
PTCH1-217ENST00000548420 NAA40Q86UY6 237 aa11.69□□□□□ -0.54
PTCH1-217ENST00000548420 TIGD4Q8IY51 512 aa11.69□□□□□ -0.54
PTCH1-217ENST00000548420 ST7LQ8TDW4 575 aa11.69□□□□□ -0.54
PTCH1-217ENST00000548420 LRTOMTQ8WZ04 291 aa11.69□□□□□ -0.54
PTCH1-217ENST00000548420 GABARAPL1Q9H0R8 117 aa11.69□□□□□ -0.54
PTCH1-217ENST00000548420 PAPOLBQ9NRJ5 636 aaKnown RBP11.69□□□□□ -0.54
PTCH1-217ENST00000548420 IGHV3OR16-10A0A075B7F0 116 aa11.68□□□□□ -0.54
PTCH1-217ENST00000548420 F5H5K5 113 aa11.68□□□□□ -0.54
PTCH1-217ENST00000548420 G3V2T6 193 aa11.68□□□□□ -0.54
PTCH1-217ENST00000548420 CIB2O75838 187 aa11.68□□□□□ -0.54
PTCH1-217ENST00000548420 PAICSP22234 425 aaKnown RBP11.68□□□□□ -0.54
PTCH1-217ENST00000548420 SLC2A5P22732 501 aa11.68□□□□□ -0.54
PTCH1-217ENST00000548420 TPTEP56180 551 aa11.68□□□□□ -0.54
PTCH1-217ENST00000548420 PTGES3Q15185 160 aaKnown RBP11.68□□□□□ -0.54
PTCH1-217ENST00000548420 DCXRQ7Z4W1 244 aa11.68□□□□□ -0.54
PTCH1-217ENST00000548420 CENPNQ96H22 339 aaPredicted RBP11.68□□□□□ -0.54
PTCH1-217ENST00000548420 MSL2Q9HCI7 577 aa11.68□□□□□ -0.54
PTCH1-217ENST00000548420 IGHV1-69-2A0A0G2JMI3 117 aa11.67□□□□□ -0.54
PTCH1-217ENST00000548420 PRR23D1E9PI22 279 aaPredicted RBP11.67□□□□□ -0.54
PTCH1-217ENST00000548420 M0R135 149 aa11.67□□□□□ -0.54
PTCH1-217ENST00000548420 EBAG9O00559 213 aa11.67□□□□□ -0.54
PTCH1-217ENST00000548420 PRODHO43272 600 aa11.67□□□□□ -0.54
PTCH1-217ENST00000548420 SPRY3O43610 288 aa11.67□□□□□ -0.54
PTCH1-217ENST00000548420 TIMM8AO60220 97 aaPredicted RBP11.67□□□□□ -0.54
PTCH1-217ENST00000548420 PRR23D2P0DMB1 279 aaPredicted RBP11.67□□□□□ -0.54
PTCH1-217ENST00000548420 IGHV4-38-2P0DP08 117 aa11.67□□□□□ -0.54
PTCH1-217ENST00000548420 GSTT1P30711 240 aa11.67□□□□□ -0.54
PTCH1-217ENST00000548420 TSTQ16762 297 aaKnown RBP11.67□□□□□ -0.54
PTCH1-217ENST00000548420 SPRNQ5BIV9 151 aa11.67□□□□□ -0.54
PTCH1-217ENST00000548420 ZMAT1Q5H9K5 638 aa11.67□□□□□ -0.54
PTCH1-217ENST00000548420 SLC35D3Q5M8T2 416 aa11.67□□□□□ -0.54
PTCH1-217ENST00000548420 PLBD1Q6P4A8 553 aa11.67□□□□□ -0.54
PTCH1-217ENST00000548420 DRAM2Q6UX65 266 aa11.67□□□□□ -0.54
PTCH1-217ENST00000548420 DPY19L4Q7Z388 723 aa11.67□□□□□ -0.54
PTCH1-217ENST00000548420 ZDHHC13Q8IUH4 622 aa11.67□□□□□ -0.54
PTCH1-217ENST00000548420 CPOQ8IVL8 374 aa11.67□□□□□ -0.54
PTCH1-217ENST00000548420 OR6K6Q8NGW6 343 aa11.67□□□□□ -0.54
PTCH1-217ENST00000548420 RAB39BQ96DA2 213 aa11.67□□□□□ -0.54
PTCH1-217ENST00000548420 SLAMF6Q96DU3 332 aa11.67□□□□□ -0.54
PTCH1-217ENST00000548420 ZNF799Q96GE5 643 aa11.67□□□□□ -0.54
PTCH1-217ENST00000548420 INTS14Q96SY0 518 aa11.67□□□□□ -0.54
PTCH1-217ENST00000548420 CHIAQ9BZP6 476 aa11.67□□□□□ -0.54
PTCH1-217ENST00000548420 MS4A7Q9GZW8 240 aaPredicted RBP11.67□□□□□ -0.54
PTCH1-217ENST00000548420 SAP30LQ9HAJ7 183 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms