RNA–Protein interactions for RNA: ENST00000546276.5

NPC1L1-204, Transcript of NPC1 like intracellular cholesterol transporter 1, humanhuman

TSL 1 (best) BASIC

Gene NPC1L1, Length 4,826 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1L1-204ENST00000546276 CD96P40200 585 aa11.01□□□□□ -0.65
NPC1L1-204ENST00000546276 CDKN2AP42771 156 aaKnown RBP11.01□□□□□ -0.65
NPC1L1-204ENST00000546276 NKAIN1Q4KMZ8 207 aa11.01□□□□□ -0.65
NPC1L1-204ENST00000546276 ZFP62Q8NB50 900 aaPredicted RBP11.01□□□□□ -0.65
NPC1L1-204ENST00000546276 OR51H1Q8NH63 302 aa11.01□□□□□ -0.65
NPC1L1-204ENST00000546276 GNG13Q9P2W3 67 aa11.01□□□□□ -0.65
NPC1L1-204ENST00000546276 MYOTQ9UBF9 498 aa11.01□□□□□ -0.65
NPC1L1-204ENST00000546276 SERPINE3A8MV23 424 aa11.01□□□□□ -0.65
NPC1L1-204ENST00000546276 CISD3P0C7P0 127 aa11.01□□□□□ -0.65
NPC1L1-204ENST00000546276 SLC38A6Q8IZM9 456 aa11.01□□□□□ -0.65
NPC1L1-204ENST00000546276 COMMD1Q8N668 190 aa11.01□□□□□ -0.65
NPC1L1-204ENST00000546276 OR51F2Q8NH61 342 aa11.01□□□□□ -0.65
NPC1L1-204ENST00000546276 C12orf10Q9HB07 376 aa11.01□□□□□ -0.65
NPC1L1-204ENST00000546276 NINQ8N4C6 2090 aa11.01□□□□□ -0.65
NPC1L1-204ENST00000546276 OR2W5A6NFC9 320 aa11.01□□□□□ -0.65
NPC1L1-204ENST00000546276 H7BYZ3 331 aa11.01□□□□□ -0.65
NPC1L1-204ENST00000546276 TO15178 435 aa11.01□□□□□ -0.65
NPC1L1-204ENST00000546276 MPC2O95563 127 aa11.01□□□□□ -0.65
NPC1L1-204ENST00000546276 LBX1P52954 281 aa11.01□□□□□ -0.65
NPC1L1-204ENST00000546276 ELLP55199 621 aaPredicted RBP11.01□□□□□ -0.65
NPC1L1-204ENST00000546276 ZNF121P58317 390 aaPredicted RBP11.01□□□□□ -0.65
NPC1L1-204ENST00000546276 LSM11P83369 360 aaKnown RBP eCLIP11.01□□□□□ -0.656e-8■□□□□ 8.5
NPC1L1-204ENST00000546276 VN1R4Q7Z5H5 301 aa11.01□□□□□ -0.65
NPC1L1-204ENST00000546276 AGBL5Q8NDL9 886 aa11.01□□□□□ -0.65
NPC1L1-204ENST00000546276 DMBX1Q8NFW5 382 aa11.01□□□□□ -0.65
NPC1L1-204ENST00000546276 PTP4A1Q93096 173 aa11.01□□□□□ -0.65
NPC1L1-204ENST00000546276 MSI2Q96DH6 328 aaKnown RBP11.01□□□□□ -0.65
NPC1L1-204ENST00000546276 GPA33Q99795 319 aa11.01□□□□□ -0.65
NPC1L1-204ENST00000546276 ARV1Q9H2C2 271 aa11.01□□□□□ -0.65
NPC1L1-204ENST00000546276 C9orf170A2RU37 121 aa11□□□□□ -0.65
NPC1L1-204ENST00000546276 ZNF587BE7ETH6 402 aa11□□□□□ -0.65
NPC1L1-204ENST00000546276 XRCC2O43543 280 aa11□□□□□ -0.65
NPC1L1-204ENST00000546276 TXNDC12O95881 172 aa11□□□□□ -0.65
NPC1L1-204ENST00000546276 CST4P01036 141 aa11□□□□□ -0.65
NPC1L1-204ENST00000546276 MYOGP15173 224 aa11□□□□□ -0.65
NPC1L1-204ENST00000546276 TBXA2RP21731 343 aa11□□□□□ -0.65
NPC1L1-204ENST00000546276 AKR1C3P42330 323 aa11□□□□□ -0.65
NPC1L1-204ENST00000546276 MLF2Q15773 248 aaPredicted RBP11□□□□□ -0.65
NPC1L1-204ENST00000546276 LILRA6Q6PI73 481 aa11□□□□□ -0.65
NPC1L1-204ENST00000546276 TMEM123Q8N131 208 aa11□□□□□ -0.65
NPC1L1-204ENST00000546276 OXGR1Q96P68 337 aa11□□□□□ -0.65
NPC1L1-204ENST00000546276 OR2A5Q96R48 311 aa11□□□□□ -0.65
NPC1L1-204ENST00000546276 RAB18Q9NP72 206 aa11□□□□□ -0.65
NPC1L1-204ENST00000546276 LHX6Q9UPM6 363 aa11□□□□□ -0.65
NPC1L1-204ENST00000546276 SSSCA1O60232 199 aa11□□□□□ -0.65
NPC1L1-204ENST00000546276 NME1P15531 152 aaKnown RBP11□□□□□ -0.65
NPC1L1-204ENST00000546276 CXCL12P48061 93 aa11□□□□□ -0.65
NPC1L1-204ENST00000546276 UBE3DQ7Z6J8 389 aa11□□□□□ -0.65
NPC1L1-204ENST00000546276 OR10J5Q8NHC4 309 aa11□□□□□ -0.65
NPC1L1-204ENST00000546276 COX14Q96I36 57 aa11□□□□□ -0.65
NPC1L1-204ENST00000546276 NTMQ9P121 344 aa11□□□□□ -0.65
NPC1L1-204ENST00000546276 OPN4Q9UHM6 478 aa11□□□□□ -0.65
NPC1L1-204ENST00000546276 SMUG1Q53HV7 270 aa11□□□□□ -0.65
NPC1L1-204ENST00000546276 OR8G2PQ6IF36 304 aa11□□□□□ -0.65
NPC1L1-204ENST00000546276 ZNF770Q6IQ21 691 aaPredicted RBP11□□□□□ -0.65
NPC1L1-204ENST00000546276 C11orf40Q8WZ69 217 aa11□□□□□ -0.65
NPC1L1-204ENST00000546276 MRGPRX4Q96LA9 322 aa11□□□□□ -0.65
NPC1L1-204ENST00000546276 MRGPRX1Q96LB2 322 aa11□□□□□ -0.65
NPC1L1-204ENST00000546276 SLCO1B1Q9Y6L6 691 aa11□□□□□ -0.65
NPC1L1-204ENST00000546276 OTOL1A6NHN0 477 aaPredicted RBP11□□□□□ -0.65
NPC1L1-204ENST00000546276 RAB13P51153 203 aa11□□□□□ -0.65
NPC1L1-204ENST00000546276 TMEM196Q5HYL7 178 aa11□□□□□ -0.65
NPC1L1-204ENST00000546276 LHFPL2Q6ZUX7 228 aa11□□□□□ -0.65
NPC1L1-204ENST00000546276 TSPAN32Q96QS1 320 aa11□□□□□ -0.65
NPC1L1-204ENST00000546276 KCNJ15Q99712 375 aa11□□□□□ -0.65
NPC1L1-204ENST00000546276 PRRX2Q99811 253 aa11□□□□□ -0.65
NPC1L1-204ENST00000546276 QSER1Q2KHR3 1735 aa10.99□□□□□ -0.65
NPC1L1-204ENST00000546276 TCRBV16S1A1N1A0A5B0 115 aa10.99□□□□□ -0.65
NPC1L1-204ENST00000546276 HLA-DOBP13765 273 aa10.99□□□□□ -0.65
NPC1L1-204ENST00000546276 MRM1Q6IN84 353 aaKnown RBP10.99□□□□□ -0.65
NPC1L1-204ENST00000546276 ZNF705AQ6ZN79 300 aaPredicted RBP10.99□□□□□ -0.65
NPC1L1-204ENST00000546276 MRM2Q9UI43 246 aaKnown RBP10.99□□□□□ -0.65
NPC1L1-204ENST00000546276 MMP17Q9ULZ9 603 aa10.99□□□□□ -0.65
NPC1L1-204ENST00000546276 FAM221AA4D161 298 aa10.99□□□□□ -0.65
NPC1L1-204ENST00000546276 NQO2P16083 231 aa10.99□□□□□ -0.65
NPC1L1-204ENST00000546276 HTRA4P83105 476 aaPredicted RBP10.99□□□□□ -0.65
NPC1L1-204ENST00000546276 LCN15Q6UWW0 184 aa10.99□□□□□ -0.65
NPC1L1-204ENST00000546276 RXFP4Q8TDU9 374 aa10.99□□□□□ -0.65
NPC1L1-204ENST00000546276 SFT2D2O95562 160 aa10.99□□□□□ -0.65
NPC1L1-204ENST00000546276 SHBQ15464 509 aa10.99□□□□□ -0.65
NPC1L1-204ENST00000546276 ZNF141Q15928 474 aa10.99□□□□□ -0.65
NPC1L1-204ENST00000546276 GPR119Q8TDV5 335 aa10.99□□□□□ -0.65
NPC1L1-204ENST00000546276 HPSE2Q8WWQ2 592 aa10.99□□□□□ -0.65
NPC1L1-204ENST00000546276 RNF150Q9ULK6 438 aa10.99□□□□□ -0.65
NPC1L1-204ENST00000546276 ZNF727A8MUV8 499 aa10.98□□□□□ -0.65
NPC1L1-204ENST00000546276 NXPH2O95156 264 aa10.98□□□□□ -0.65
NPC1L1-204ENST00000546276 DUS4LO95620 317 aaKnown RBP10.98□□□□□ -0.65
NPC1L1-204ENST00000546276 GPANK1O95872 356 aa10.98□□□□□ -0.65
NPC1L1-204ENST00000546276 IGHEP01854 428 aa10.98□□□□□ -0.65
NPC1L1-204ENST00000546276 PTGER4P35408 488 aa10.98□□□□□ -0.65
NPC1L1-204ENST00000546276 ARL3P36405 182 aa10.98□□□□□ -0.65
NPC1L1-204ENST00000546276 CCR5P51681 352 aa10.98□□□□□ -0.65
NPC1L1-204ENST00000546276 HTRA3P83110 453 aa10.98□□□□□ -0.65
NPC1L1-204ENST00000546276 GUK1Q16774 197 aa10.98□□□□□ -0.65
NPC1L1-204ENST00000546276 PRSS41Q7RTY9 318 aa10.98□□□□□ -0.65
NPC1L1-204ENST00000546276 BAGE3Q86Y29 109 aa10.98□□□□□ -0.65
NPC1L1-204ENST00000546276 BAGE2Q86Y30 109 aa10.98□□□□□ -0.65
NPC1L1-204ENST00000546276 BATF2Q8N1L9 274 aa10.98□□□□□ -0.65
NPC1L1-204ENST00000546276 BORCS7Q96B45 105 aa10.98□□□□□ -0.65
NPC1L1-204ENST00000546276 CMBLQ96DG6 245 aa10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms