RNA–Protein interactions for RNA: ENST00000546164.5

YBX3-217, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 805 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-217ENST00000546164 DCTDP32321 178 aa10.01□□□□□ -0.81
YBX3-217ENST00000546164 POLR2IP36954 125 aaKnown RBP10.01□□□□□ -0.81
YBX3-217ENST00000546164 CD200P41217 278 aa10.01□□□□□ -0.81
YBX3-217ENST00000546164 PRSS12P56730 875 aa10.01□□□□□ -0.81
YBX3-217ENST00000546164 ZNF121P58317 390 aaPredicted RBP10.01□□□□□ -0.81
YBX3-217ENST00000546164 PSMA6P60900 246 aaKnown RBP10.01□□□□□ -0.81
YBX3-217ENST00000546164 ROM1Q03395 351 aa10.01□□□□□ -0.81
YBX3-217ENST00000546164 TMEM155Q4W5P6 130 aa10.01□□□□□ -0.81
YBX3-217ENST00000546164 KCTD18Q6PI47 426 aaPredicted RBP10.01□□□□□ -0.81
YBX3-217ENST00000546164 KLBQ86Z14 1044 aa10.01□□□□□ -0.81
YBX3-217ENST00000546164 HIST2H2ABQ8IUE6 130 aaPredicted RBP10.01□□□□□ -0.81
YBX3-217ENST00000546164 GID4Q8IVV7 300 aa10.01□□□□□ -0.81
YBX3-217ENST00000546164 OR56B2PQ8NGI1 322 aa10.01□□□□□ -0.81
YBX3-217ENST00000546164 OR8J1Q8NGP2 316 aa10.01□□□□□ -0.81
YBX3-217ENST00000546164 ERGIC1Q969X5 290 aa10.01□□□□□ -0.81
YBX3-217ENST00000546164 SGK3Q96BR1 496 aa10.01□□□□□ -0.81
YBX3-217ENST00000546164 RAB39BQ96DA2 213 aa10.01□□□□□ -0.81
YBX3-217ENST00000546164 CNN2Q99439 309 aaKnown RBP10.01□□□□□ -0.81
YBX3-217ENST00000546164 MNTQ99583 582 aa10.01□□□□□ -0.81
YBX3-217ENST00000546164 OR10A2Q9H208 303 aa10.01□□□□□ -0.81
YBX3-217ENST00000546164 ZNF665Q9H7R5 613 aa10.01□□□□□ -0.81
YBX3-217ENST00000546164 S100A14Q9HCY8 104 aa10.01□□□□□ -0.81
YBX3-217ENST00000546164 DCAF16Q9NXF7 216 aa10.01□□□□□ -0.81
YBX3-217ENST00000546164 LAMP5Q9UJQ1 280 aa10.01□□□□□ -0.81
YBX3-217ENST00000546164 hCG_38984A0A1B0GV85 526 aa10□□□□□ -0.81
YBX3-217ENST00000546164 ACOD1A6NK06 481 aa10□□□□□ -0.81
YBX3-217ENST00000546164 E9PQ18 207 aa10□□□□□ -0.81
YBX3-217ENST00000546164 TMEM178BH3BS89 294 aa10□□□□□ -0.81
YBX3-217ENST00000546164 EI24O14681 340 aa10□□□□□ -0.81
YBX3-217ENST00000546164 GMDSO60547 372 aa10□□□□□ -0.81
YBX3-217ENST00000546164 ZNF254O75437 659 aa10□□□□□ -0.81
YBX3-217ENST00000546164 HLA-DPB1P04440 258 aa10□□□□□ -0.81
YBX3-217ENST00000546164 MSMBP08118 114 aa10□□□□□ -0.81
YBX3-217ENST00000546164 FAM157CP0CG43 387 aa10□□□□□ -0.81
YBX3-217ENST00000546164 ANPEPP15144 967 aa10□□□□□ -0.81
YBX3-217ENST00000546164 ALDH3A2P51648 485 aa10□□□□□ -0.81
YBX3-217ENST00000546164 RAD23AP54725 363 aa10□□□□□ -0.81
YBX3-217ENST00000546164 BTG1P62324 171 aa10□□□□□ -0.81
YBX3-217ENST00000546164 FAM3AP98173 230 aa10□□□□□ -0.81
YBX3-217ENST00000546164 MAB21L1Q13394 359 aa10□□□□□ -0.81
YBX3-217ENST00000546164 TIGD6Q17RP2 521 aa10□□□□□ -0.81
YBX3-217ENST00000546164 LRRN1Q6UXK5 716 aa10□□□□□ -0.81
YBX3-217ENST00000546164 FAM57BQ71RH2 274 aa10□□□□□ -0.81
YBX3-217ENST00000546164 BCDIN3DQ7Z5W3 292 aaKnown RBP10□□□□□ -0.81
YBX3-217ENST00000546164 KRT77Q7Z794 578 aa10□□□□□ -0.81
YBX3-217ENST00000546164 GLCCI1Q86VQ1 547 aa10□□□□□ -0.81
YBX3-217ENST00000546164 LRRC28Q86X40 367 aaPredicted RBP10□□□□□ -0.81
YBX3-217ENST00000546164 PRIMA1Q86XR5 153 aa10□□□□□ -0.81
YBX3-217ENST00000546164 SPERTQ8NA61 448 aa10□□□□□ -0.81
YBX3-217ENST00000546164 PLPP7Q8NBV4 271 aa10□□□□□ -0.81
YBX3-217ENST00000546164 OR51F2Q8NH61 342 aa10□□□□□ -0.81
YBX3-217ENST00000546164 Q8TCH9 128 aa10□□□□□ -0.81
YBX3-217ENST00000546164 TRUB1Q8WWH5 349 aaKnown RBP10□□□□□ -0.81
YBX3-217ENST00000546164 ASB17Q8WXJ9 295 aa10□□□□□ -0.81
YBX3-217ENST00000546164 ITFG2Q969R8 447 aa10□□□□□ -0.81
YBX3-217ENST00000546164 TMEM186Q96B77 213 aa10□□□□□ -0.81
YBX3-217ENST00000546164 REEP6Q96HR9 211 aa10□□□□□ -0.81
YBX3-217ENST00000546164 OR8B4Q96RC9 309 aa10□□□□□ -0.81
YBX3-217ENST00000546164 IL4I1Q96RQ9 567 aa10□□□□□ -0.81
YBX3-217ENST00000546164 GAL3ST1Q99999 423 aa10□□□□□ -0.81
YBX3-217ENST00000546164 BEX2Q9BXY8 128 aa10□□□□□ -0.81
YBX3-217ENST00000546164 SHARPINQ9H0F6 387 aa10□□□□□ -0.81
YBX3-217ENST00000546164 RIBC2Q9H4K1 309 aa10□□□□□ -0.81
YBX3-217ENST00000546164 ADGRL4Q9HBW9 690 aa10□□□□□ -0.81
YBX3-217ENST00000546164 DNAJC27Q9NZQ0 273 aa10□□□□□ -0.81
YBX3-217ENST00000546164 H2AFY2Q9P0M6 372 aaPredicted RBP10□□□□□ -0.81
YBX3-217ENST00000546164 ZNF319Q9P2F9 582 aa10□□□□□ -0.81
YBX3-217ENST00000546164 WARS2Q9UGM6 360 aaKnown RBP10□□□□□ -0.81
YBX3-217ENST00000546164 ZNF391Q9UJN7 358 aa10□□□□□ -0.81
YBX3-217ENST00000546164 LRP12Q9Y561 859 aa10□□□□□ -0.81
YBX3-217ENST00000546164 COL6A5A8TX70 2615 aa9.99□□□□□ -0.81
YBX3-217ENST00000546164 DYSFO75923 2080 aa9.99□□□□□ -0.81
YBX3-217ENST00000546164 TRAV20A0A0B4J274 112 aa9.99□□□□□ -0.81
YBX3-217ENST00000546164 PRR32B1ATL7 298 aa9.99□□□□□ -0.81
YBX3-217ENST00000546164 TBX1O43435 398 aa9.99□□□□□ -0.81
YBX3-217ENST00000546164 MRPL3P09001 348 aaKnown RBP9.99□□□□□ -0.81
YBX3-217ENST00000546164 SBK2P0C263 348 aa9.99□□□□□ -0.81
YBX3-217ENST00000546164 HNF1AP20823 631 aa9.99□□□□□ -0.81
YBX3-217ENST00000546164 CA6P23280 308 aa9.99□□□□□ -0.81
YBX3-217ENST00000546164 CPT2P23786 658 aa9.99□□□□□ -0.81
YBX3-217ENST00000546164 HTR1FP30939 366 aa9.99□□□□□ -0.81
YBX3-217ENST00000546164 HCCSP53701 268 aa9.99□□□□□ -0.81
YBX3-217ENST00000546164 TMED1Q13445 227 aa9.99□□□□□ -0.81
YBX3-217ENST00000546164 ZMYND11Q15326 602 aa9.99□□□□□ -0.81
YBX3-217ENST00000546164 OR8B8Q15620 311 aa9.99□□□□□ -0.81
YBX3-217ENST00000546164 SNCBQ16143 134 aa9.99□□□□□ -0.81
YBX3-217ENST00000546164 CR1LQ2VPA4 569 aa9.99□□□□□ -0.81
YBX3-217ENST00000546164 FAM120AOSQ5T036 256 aa9.99□□□□□ -0.81
YBX3-217ENST00000546164 MOGAT3Q86VF5 341 aa9.99□□□□□ -0.81
YBX3-217ENST00000546164 ZNF679Q8IYX0 411 aa9.99□□□□□ -0.81
YBX3-217ENST00000546164 PQLC1Q8N2U9 271 aa9.99□□□□□ -0.81
YBX3-217ENST00000546164 CBR4Q8N4T8 237 aa9.99□□□□□ -0.81
YBX3-217ENST00000546164 SPICQ8N5J4 248 aa9.99□□□□□ -0.81
YBX3-217ENST00000546164 PGAM5Q96HS1 289 aa9.99□□□□□ -0.81
YBX3-217ENST00000546164 HRASLS5Q96KN8 279 aa9.99□□□□□ -0.81
YBX3-217ENST00000546164 ADAT1Q9BUB4 502 aaKnown RBP9.99□□□□□ -0.81
YBX3-217ENST00000546164 MROQ9BYG7 248 aa9.99□□□□□ -0.81
YBX3-217ENST00000546164 COPS3Q9UNS2 423 aa9.99□□□□□ -0.81
YBX3-217ENST00000546164 N6AMT1Q9Y5N5 214 aa9.99□□□□□ -0.81
YBX3-217ENST00000546164 ORC6Q9Y5N6 252 aa9.99□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms