RNA–Protein interactions for RNA: ENST00000545663.5

CLSTN3-216, Transcript of calsyntenin 3, humanhuman

TSL 4

Gene CLSTN3, Length 533 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-216ENST00000545663 CST2P09228 141 aa12.45□□□□□ -0.42
CLSTN3-216ENST00000545663 TUBG1P23258 451 aa12.45□□□□□ -0.42
CLSTN3-216ENST00000545663 GATA4P43694 442 aa12.45□□□□□ -0.42
CLSTN3-216ENST00000545663 SELENOWP63302 87 aa12.45□□□□□ -0.42
CLSTN3-216ENST00000545663 TRAP1Q12931 704 aaKnown RBP12.45□□□□□ -0.42
CLSTN3-216ENST00000545663 ENDOGQ14249 297 aaKnown RBP12.45□□□□□ -0.42
CLSTN3-216ENST00000545663 LRRC75BQ2VPJ9 315 aa12.45□□□□□ -0.42
CLSTN3-216ENST00000545663 LRRC23Q53EV4 343 aaPredicted RBP12.45□□□□□ -0.42
CLSTN3-216ENST00000545663 CLDN22Q8N7P3 220 aa12.45□□□□□ -0.42
CLSTN3-216ENST00000545663 LINC00482Q8N8I6 264 aa12.45□□□□□ -0.42
CLSTN3-216ENST00000545663 C8orf46Q8TAG6 207 aa12.45□□□□□ -0.42
CLSTN3-216ENST00000545663 ASB9Q96DX5 294 aa12.45□□□□□ -0.42
CLSTN3-216ENST00000545663 NSMCE2Q96MF7 247 aa12.45□□□□□ -0.42
CLSTN3-216ENST00000545663 POLR2J2Q9GZM3 115 aaKnown RBP12.45□□□□□ -0.42
CLSTN3-216ENST00000545663 POLR2J3Q9H1A7 115 aaKnown RBP12.45□□□□□ -0.42
CLSTN3-216ENST00000545663 TMEM27Q9HBJ8 222 aa12.45□□□□□ -0.42
CLSTN3-216ENST00000545663 TUBG2Q9NRH3 451 aa12.45□□□□□ -0.42
CLSTN3-216ENST00000545663 MCIDASD6RGH6 385 aa12.44□□□□□ -0.42
CLSTN3-216ENST00000545663 BLOC1S5-TXNDC5H3BN57 136 aa12.44□□□□□ -0.42
CLSTN3-216ENST00000545663 GSC2O15499 205 aa12.44□□□□□ -0.42
CLSTN3-216ENST00000545663 PEX14O75381 377 aa12.44□□□□□ -0.42
CLSTN3-216ENST00000545663 FPR3P25089 353 aa12.44□□□□□ -0.42
CLSTN3-216ENST00000545663 RAD23AP54725 363 aa12.44□□□□□ -0.42
CLSTN3-216ENST00000545663 UGT2B15P54855 530 aa12.44□□□□□ -0.42
CLSTN3-216ENST00000545663 RGS8P57771 180 aaPredicted RBP12.44□□□□□ -0.42
CLSTN3-216ENST00000545663 CYBRD1Q53TN4 286 aa12.44□□□□□ -0.42
CLSTN3-216ENST00000545663 SLC25A47Q6Q0C1 308 aa12.44□□□□□ -0.42
CLSTN3-216ENST00000545663 LINC00114Q6XXX2 140 aa12.44□□□□□ -0.42
CLSTN3-216ENST00000545663 DHFR2Q86XF0 187 aa12.44□□□□□ -0.42
CLSTN3-216ENST00000545663 OR5AU1Q8NGC0 362 aa12.44□□□□□ -0.42
CLSTN3-216ENST00000545663 HDAC2Q92769 488 aaKnown RBP12.44□□□□□ -0.42
CLSTN3-216ENST00000545663 TAMM41Q96BW9 452 aa12.44□□□□□ -0.42
CLSTN3-216ENST00000545663 LRGUKQ96M69 825 aa12.44□□□□□ -0.42
CLSTN3-216ENST00000545663 RCHY1Q96PM5 261 aa12.44□□□□□ -0.42
CLSTN3-216ENST00000545663 WDR76Q9H967 626 aa12.44□□□□□ -0.42
CLSTN3-216ENST00000545663 NANSQ9NR45 359 aa12.44□□□□□ -0.42
CLSTN3-216ENST00000545663 RNF7Q9UBF6 113 aa12.44□□□□□ -0.42
CLSTN3-216ENST00000545663 NDRG4Q9ULP0 352 aaKnown RBP12.44□□□□□ -0.42
CLSTN3-216ENST00000545663 IGHV3OR15-7A0A075B7D8 119 aa12.43□□□□□ -0.42
CLSTN3-216ENST00000545663 H0YHG0 523 aa12.43□□□□□ -0.42
CLSTN3-216ENST00000545663 KPNA4O00629 521 aaPredicted RBP12.43□□□□□ -0.42
CLSTN3-216ENST00000545663 UBE2E1P51965 193 aa12.43□□□□□ -0.42
CLSTN3-216ENST00000545663 DGCR2P98153 550 aa12.43□□□□□ -0.42
CLSTN3-216ENST00000545663 KCNJ8Q15842 424 aa12.43□□□□□ -0.42
CLSTN3-216ENST00000545663 SWT1Q5T5J6 900 aaKnown RBP12.43□□□□□ -0.42
CLSTN3-216ENST00000545663 CBLL1Q75N03 491 aa12.43□□□□□ -0.42
CLSTN3-216ENST00000545663 FAM90A1Q86YD7 464 aa12.43□□□□□ -0.42
CLSTN3-216ENST00000545663 C10orf67Q8IYJ2 551 aa12.43□□□□□ -0.42
CLSTN3-216ENST00000545663 RNF148Q8N7C7 305 aa12.43□□□□□ -0.42
CLSTN3-216ENST00000545663 PRR25Q96S07 402 aa12.43□□□□□ -0.42
CLSTN3-216ENST00000545663 DCAF13Q9NV06 445 aaKnown RBP12.43□□□□□ -0.42
CLSTN3-216ENST00000545663 TMEM100Q9NV29 134 aa12.43□□□□□ -0.42
CLSTN3-216ENST00000545663 A0A1B0GWJ7 208 aa12.42□□□□□ -0.42
CLSTN3-216ENST00000545663 TCRBV4S1A1TA0A5B7 111 aa12.42□□□□□ -0.42
CLSTN3-216ENST00000545663 ARPC2O15144 300 aa12.42□□□□□ -0.42
CLSTN3-216ENST00000545663 ZNF682O95780 498 aa12.42□□□□□ -0.42
CLSTN3-216ENST00000545663 SERPINA1P01009 418 aa12.42□□□□□ -0.42
CLSTN3-216ENST00000545663 IFNW1P05000 195 aa12.42□□□□□ -0.42
CLSTN3-216ENST00000545663 ASAH2BP0C7U1 165 aa12.42□□□□□ -0.42
CLSTN3-216ENST00000545663 PCBD1P61457 104 aa12.42□□□□□ -0.42
CLSTN3-216ENST00000545663 RPL18Q07020 188 aaKnown RBP12.42□□□□□ -0.42
CLSTN3-216ENST00000545663 CD47Q08722 323 aa12.42□□□□□ -0.42
CLSTN3-216ENST00000545663 DUSP7Q16829 419 aa12.42□□□□□ -0.42
CLSTN3-216ENST00000545663 IFI44LQ53G44 452 aa12.42□□□□□ -0.42
CLSTN3-216ENST00000545663 ARMC4Q5T2S8 1044 aa12.42□□□□□ -0.42
CLSTN3-216ENST00000545663 LCN8Q6JVE9 175 aa12.42□□□□□ -0.42
CLSTN3-216ENST00000545663 PGM2L1Q6PCE3 622 aa12.42□□□□□ -0.42
CLSTN3-216ENST00000545663 FBXW12Q6X9E4 464 aa12.42□□□□□ -0.42
CLSTN3-216ENST00000545663 FKBP9P1Q75LS8 142 aa12.42□□□□□ -0.42
CLSTN3-216ENST00000545663 MRPL41Q8IXM3 137 aaKnown RBP12.42□□□□□ -0.42
CLSTN3-216ENST00000545663 CMTM4Q8IZR5 234 aa12.42□□□□□ -0.42
CLSTN3-216ENST00000545663 SMYD1Q8NB12 490 aa12.42□□□□□ -0.42
CLSTN3-216ENST00000545663 MEGF9Q9H1U4 602 aa12.42□□□□□ -0.42
CLSTN3-216ENST00000545663 SMURF2Q9HAU4 748 aa12.42□□□□□ -0.42
CLSTN3-216ENST00000545663 EMC7Q9NPA0 242 aa12.42□□□□□ -0.42
CLSTN3-216ENST00000545663 TRBV23-1A0A0A0MS06 115 aa12.41□□□□□ -0.42
CLSTN3-216ENST00000545663 A0A1W2PRG6 482 aa12.41□□□□□ -0.42
CLSTN3-216ENST00000545663 OOEPA6NGQ2 149 aa12.41□□□□□ -0.42
CLSTN3-216ENST00000545663 AQP12BA6NM10 295 aa12.41□□□□□ -0.42
CLSTN3-216ENST00000545663 CIB2O75838 187 aa12.41□□□□□ -0.42
CLSTN3-216ENST00000545663 HIST1H2ABP04908 130 aa12.41□□□□□ -0.42
CLSTN3-216ENST00000545663 DBHP09172 617 aa12.41□□□□□ -0.42
CLSTN3-216ENST00000545663 UMPSP11172 480 aa12.41□□□□□ -0.42
CLSTN3-216ENST00000545663 CD247P20963 164 aa12.41□□□□□ -0.42
CLSTN3-216ENST00000545663 RAB13P51153 203 aa12.41□□□□□ -0.42
CLSTN3-216ENST00000545663 ACSM1Q08AH1 577 aa12.41□□□□□ -0.42
CLSTN3-216ENST00000545663 OTPQ5XKR4 325 aa12.41□□□□□ -0.42
CLSTN3-216ENST00000545663 HCP5Q6MZN7 132 aa12.41□□□□□ -0.42
CLSTN3-216ENST00000545663 ZNF613Q6PF04 617 aa12.41□□□□□ -0.42
CLSTN3-216ENST00000545663 HIST3H2AQ7L7L0 130 aa12.41□□□□□ -0.42
CLSTN3-216ENST00000545663 CYP4Z1Q86W10 505 aa12.41□□□□□ -0.42
CLSTN3-216ENST00000545663 TMEM219Q86XT9 240 aa12.41□□□□□ -0.42
CLSTN3-216ENST00000545663 AQP12AQ8IXF9 295 aa12.41□□□□□ -0.42
CLSTN3-216ENST00000545663 DTX3Q8N9I9 347 aa12.41□□□□□ -0.42
CLSTN3-216ENST00000545663 HIST1H2ACQ93077 130 aa12.41□□□□□ -0.42
CLSTN3-216ENST00000545663 TPD52L3Q96J77 140 aa12.41□□□□□ -0.42
CLSTN3-216ENST00000545663 RAB3IPQ96QF0 476 aaPredicted RBP12.41□□□□□ -0.42
CLSTN3-216ENST00000545663 CCL13Q99616 98 aa12.41□□□□□ -0.42
CLSTN3-216ENST00000545663 CADM1Q9BY67 442 aaKnown RBP12.41□□□□□ -0.42
CLSTN3-216ENST00000545663 SH3GLB1Q9Y371 365 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms