RNA–Protein interactions for RNA: ENST00000544990.5

CPSF7-224, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 3

Gene CPSF7, Length 646 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-224ENST00000544990 APOC1P02654 83 aa6.25□□□□□ -1.41
CPSF7-224ENST00000544990 CD55P08174 381 aa6.25□□□□□ -1.41
CPSF7-224ENST00000544990 ANPEPP15144 967 aa6.25□□□□□ -1.41
CPSF7-224ENST00000544990 FAHP16930 419 aa6.25□□□□□ -1.41
CPSF7-224ENST00000544990 RPS27P42677 84 aaKnown RBP6.25□□□□□ -1.41
CPSF7-224ENST00000544990 DAPP51397 102 aa6.25□□□□□ -1.41
CPSF7-224ENST00000544990 RPS7P62081 194 aaKnown RBP6.25□□□□□ -1.41
CPSF7-224ENST00000544990 GRB2P62993 217 aaKnown RBP6.25□□□□□ -1.41
CPSF7-224ENST00000544990 CCNIQ14094 377 aa6.25□□□□□ -1.41
CPSF7-224ENST00000544990 EIF2B1Q14232 305 aaKnown RBP6.25□□□□□ -1.41
CPSF7-224ENST00000544990 HLXQ14774 488 aaPredicted RBP6.25□□□□□ -1.41
CPSF7-224ENST00000544990 TRIP10Q15642 601 aa6.25□□□□□ -1.41
CPSF7-224ENST00000544990 SNAPC1Q16533 368 aa6.25□□□□□ -1.41
CPSF7-224ENST00000544990 PCK2Q16822 640 aa6.25□□□□□ -1.41
CPSF7-224ENST00000544990 RSPO1Q2MKA7 263 aaPredicted RBP6.25□□□□□ -1.41
CPSF7-224ENST00000544990 KRTAP27-1Q3LI81 207 aa6.25□□□□□ -1.41
CPSF7-224ENST00000544990 CHRFAM7AQ494W8 412 aa6.25□□□□□ -1.41
CPSF7-224ENST00000544990 KLHL12Q53G59 568 aa6.25□□□□□ -1.41
CPSF7-224ENST00000544990 TMEM255AQ5JRV8 349 aa6.25□□□□□ -1.41
CPSF7-224ENST00000544990 SLC35D3Q5M8T2 416 aa6.25□□□□□ -1.41
CPSF7-224ENST00000544990 LINC01590Q5TEZ4 76 aa6.25□□□□□ -1.41
CPSF7-224ENST00000544990 OR2T2Q6IF00 324 aa6.25□□□□□ -1.41
CPSF7-224ENST00000544990 PLBD1Q6P4A8 553 aa6.25□□□□□ -1.41
CPSF7-224ENST00000544990 FAHD1Q6P587 224 aa6.25□□□□□ -1.41
CPSF7-224ENST00000544990 PGAP1Q75T13 922 aa6.25□□□□□ -1.41
CPSF7-224ENST00000544990 RHOUQ7L0Q8 258 aa6.25□□□□□ -1.41
CPSF7-224ENST00000544990 ASRGL1Q7L266 308 aa6.25□□□□□ -1.41
CPSF7-224ENST00000544990 MRPL21Q7Z2W9 205 aaKnown RBP6.25□□□□□ -1.41
CPSF7-224ENST00000544990 DPY19L4Q7Z388 723 aa6.25□□□□□ -1.41
CPSF7-224ENST00000544990 AMIGO2Q86SJ2 522 aa6.25□□□□□ -1.41
CPSF7-224ENST00000544990 HIST2H2ABQ8IUE6 130 aaPredicted RBP6.25□□□□□ -1.41
CPSF7-224ENST00000544990 ERI1Q8IV48 349 aaKnown RBP6.25□□□□□ -1.41
CPSF7-224ENST00000544990 CPOQ8IVL8 374 aa6.25□□□□□ -1.41
CPSF7-224ENST00000544990 OR5AS1Q8N127 324 aa6.25□□□□□ -1.41
CPSF7-224ENST00000544990 PARP8Q8N3A8 854 aa6.25□□□□□ -1.41
CPSF7-224ENST00000544990 ZNF283Q8N7M2 679 aa6.25□□□□□ -1.41
CPSF7-224ENST00000544990 LINC01356Q8N9X3 169 aa6.25□□□□□ -1.41
CPSF7-224ENST00000544990 CLRN3Q8NCR9 226 aa6.25□□□□□ -1.41
CPSF7-224ENST00000544990 OR8G5Q8NG78 346 aa6.25□□□□□ -1.41
CPSF7-224ENST00000544990 OR2Z1Q8NG97 314 aa6.25□□□□□ -1.41
CPSF7-224ENST00000544990 OR13G1Q8NGZ3 307 aa6.25□□□□□ -1.41
CPSF7-224ENST00000544990 CCL17Q92583 94 aa6.25□□□□□ -1.41
CPSF7-224ENST00000544990 GTF3AQ92664 365 aaKnown RBP6.25□□□□□ -1.41
CPSF7-224ENST00000544990 MSI2Q96DH6 328 aaKnown RBP6.25□□□□□ -1.41
CPSF7-224ENST00000544990 SLAMF6Q96DU3 332 aa6.25□□□□□ -1.41
CPSF7-224ENST00000544990 TOR3AQ9H497 397 aa6.25□□□□□ -1.41
CPSF7-224ENST00000544990 MED20Q9H944 212 aa6.25□□□□□ -1.41
CPSF7-224ENST00000544990 KRT84Q9NSB2 600 aa6.25□□□□□ -1.41
CPSF7-224ENST00000544990 DDX28Q9NUL7 540 aaKnown RBP6.25□□□□□ -1.41
CPSF7-224ENST00000544990 TMEM100Q9NV29 134 aa6.25□□□□□ -1.41
CPSF7-224ENST00000544990 TMEM160Q9NX00 188 aa6.25□□□□□ -1.41
CPSF7-224ENST00000544990 TVP23BQ9NYZ1 205 aa6.25□□□□□ -1.41
CPSF7-224ENST00000544990 LPAR3Q9UBY5 353 aa6.25□□□□□ -1.41
CPSF7-224ENST00000544990 IL19Q9UHD0 177 aa6.25□□□□□ -1.41
CPSF7-224ENST00000544990 MALRD1Q5VYJ5 2156 aa6.24□□□□□ -1.41
CPSF7-224ENST00000544990 TANC2Q9HCD6 1990 aa6.24□□□□□ -1.41
CPSF7-224ENST00000544990 GGT3PA6NGU5 568 aa6.24□□□□□ -1.41
CPSF7-224ENST00000544990 IQCF6A8MYZ5 107 aa6.24□□□□□ -1.41
CPSF7-224ENST00000544990 B4DSR2 109 aa6.24□□□□□ -1.41
CPSF7-224ENST00000544990 IFNL4K9M1U5 179 aa6.24□□□□□ -1.41
CPSF7-224ENST00000544990 XRCC2O43543 280 aa6.24□□□□□ -1.41
CPSF7-224ENST00000544990 LYNP07948 512 aa6.24□□□□□ -1.41
CPSF7-224ENST00000544990 HNF1AP20823 631 aa6.24□□□□□ -1.41
CPSF7-224ENST00000544990 PCMT1P22061 227 aa6.24□□□□□ -1.41
CPSF7-224ENST00000544990 HSD11B1P28845 292 aa6.24□□□□□ -1.41
CPSF7-224ENST00000544990 OTX1P32242 354 aaPredicted RBP6.24□□□□□ -1.41
CPSF7-224ENST00000544990 SRP9P49458 86 aaKnown RBP6.24□□□□□ -1.41
CPSF7-224ENST00000544990 PRKXP51817 358 aa6.24□□□□□ -1.41
CPSF7-224ENST00000544990 RAD23AP54725 363 aa6.24□□□□□ -1.41
CPSF7-224ENST00000544990 CDH15P55291 814 aa6.24□□□□□ -1.41
CPSF7-224ENST00000544990 GK2Q14410 553 aaPredicted RBP6.24□□□□□ -1.41
CPSF7-224ENST00000544990 PTGES3Q15185 160 aaKnown RBP6.24□□□□□ -1.41
CPSF7-224ENST00000544990 TMEM236Q5W0B7 351 aa6.24□□□□□ -1.41
CPSF7-224ENST00000544990 KDM4DQ6B0I6 523 aa6.24□□□□□ -1.41
CPSF7-224ENST00000544990 ZFP1Q6P2D0 407 aa6.24□□□□□ -1.41
CPSF7-224ENST00000544990 Q6ZR03 302 aa6.24□□□□□ -1.41
CPSF7-224ENST00000544990 CXXC5Q7LFL8 322 aaKnown RBP6.24□□□□□ -1.41
CPSF7-224ENST00000544990 NAA40Q86UY6 237 aa6.24□□□□□ -1.41
CPSF7-224ENST00000544990 OR10S1Q8NGN2 331 aa6.24□□□□□ -1.41
CPSF7-224ENST00000544990 CLDND2Q8NHS1 167 aa6.24□□□□□ -1.41
CPSF7-224ENST00000544990 ST7LQ8TDW4 575 aa6.24□□□□□ -1.41
CPSF7-224ENST00000544990 THEM6Q8WUY1 208 aa6.24□□□□□ -1.41
CPSF7-224ENST00000544990 SPRYD4Q8WW59 207 aaPredicted RBP6.24□□□□□ -1.41
CPSF7-224ENST00000544990 LRTOMTQ8WZ04 291 aa6.24□□□□□ -1.41
CPSF7-224ENST00000544990 RAB39BQ96DA2 213 aa6.24□□□□□ -1.41
CPSF7-224ENST00000544990 ZMYND19Q96E35 227 aaPredicted RBP6.24□□□□□ -1.41
CPSF7-224ENST00000544990 CENPNQ96H22 339 aaPredicted RBP6.24□□□□□ -1.41
CPSF7-224ENST00000544990 ABHD6Q9BV23 337 aa6.24□□□□□ -1.41
CPSF7-224ENST00000544990 OSBPL10Q9BXB5 764 aa6.24□□□□□ -1.41
CPSF7-224ENST00000544990 BEX2Q9BXY8 128 aa6.24□□□□□ -1.41
CPSF7-224ENST00000544990 SLC22A4Q9H015 551 aa6.24□□□□□ -1.41
CPSF7-224ENST00000544990 SHARPINQ9H0F6 387 aa6.24□□□□□ -1.41
CPSF7-224ENST00000544990 GABARAPL1Q9H0R8 117 aa6.24□□□□□ -1.41
CPSF7-224ENST00000544990 OPA3Q9H6K4 179 aa6.24□□□□□ -1.41
CPSF7-224ENST00000544990 NARFLQ9H6Q4 476 aa6.24□□□□□ -1.41
CPSF7-224ENST00000544990 MARCH7Q9H992 704 aa6.24□□□□□ -1.41
CPSF7-224ENST00000544990 CDC42EP3Q9UKI2 254 aa6.24□□□□□ -1.41
CPSF7-224ENST00000544990 NOP16Q9Y3C1 178 aaKnown RBP6.24□□□□□ -1.41
CPSF7-224ENST00000544990 N6AMT1Q9Y5N5 214 aa6.24□□□□□ -1.41
CPSF7-224ENST00000544990 TLN2Q9Y4G6 2542 aa6.24□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms