RNA–Protein interactions for RNA: ENST00000543939.5

COPS7A-218, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 3

Gene COPS7A, Length 1,728 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-218ENST00000543939 C11orf54Q9H0W9 315 aaPredicted RBP17.27■□□□□ 0.36
COPS7A-218ENST00000543939 KCNK15Q9H427 330 aa17.27■□□□□ 0.36
COPS7A-218ENST00000543939 METTL17Q9H7H0 456 aaPredicted RBP17.27■□□□□ 0.36
COPS7A-218ENST00000543939 NOX3Q9HBY0 568 aa17.27■□□□□ 0.36
COPS7A-218ENST00000543939 B3GNT2Q9NY97 397 aa17.27■□□□□ 0.36
COPS7A-218ENST00000543939 CACNA1GO43497 2377 aa17.27■□□□□ 0.35
COPS7A-218ENST00000543939 TMEM272A0A1B0GTI8 110 aa17.27■□□□□ 0.35
COPS7A-218ENST00000543939 GSTZ1O43708 216 aaPredicted RBP17.27■□□□□ 0.35
COPS7A-218ENST00000543939 MTRF1O75570 445 aaKnown RBP17.27■□□□□ 0.35
COPS7A-218ENST00000543939 TMIGD3P0DMS9 266 aaPredicted RBP17.27■□□□□ 0.35
COPS7A-218ENST00000543939 CDK2P24941 298 aa17.27■□□□□ 0.35
COPS7A-218ENST00000543939 THBS4P35443 961 aa17.27■□□□□ 0.35
COPS7A-218ENST00000543939 ARR3P36575 388 aa17.27■□□□□ 0.35
COPS7A-218ENST00000543939 MNDAP41218 407 aa17.27■□□□□ 0.35
COPS7A-218ENST00000543939 EFNB2P52799 333 aa17.27■□□□□ 0.35
COPS7A-218ENST00000543939 NRARPQ7Z6K4 114 aa17.27■□□□□ 0.35
COPS7A-218ENST00000543939 OR4D6Q8NGJ1 314 aa17.27■□□□□ 0.35
COPS7A-218ENST00000543939 C10orf35Q96D05 121 aa17.27■□□□□ 0.35
COPS7A-218ENST00000543939 UQCC2Q9BRT2 126 aa17.27■□□□□ 0.35
COPS7A-218ENST00000543939 CNTD2Q9H8S5 307 aa17.27■□□□□ 0.35
COPS7A-218ENST00000543939 TP53TG5Q9Y2B4 290 aa17.27■□□□□ 0.35
COPS7A-218ENST00000543939 LDLRAD4O15165 306 aa17.26■□□□□ 0.35
COPS7A-218ENST00000543939 EEF1E1O43324 174 aaKnown RBP17.26■□□□□ 0.35
COPS7A-218ENST00000543939 TPPPO94811 219 aa17.26■□□□□ 0.35
COPS7A-218ENST00000543939 ARSBP15848 533 aa17.26■□□□□ 0.35
COPS7A-218ENST00000543939 PTH2RP49190 550 aa17.26■□□□□ 0.35
COPS7A-218ENST00000543939 NSUN5P2Q63ZY6 315 aa17.26■□□□□ 0.35
COPS7A-218ENST00000543939 DPPA2Q7Z7J5 298 aa17.26■□□□□ 0.35
COPS7A-218ENST00000543939 CDH26Q8IXH8 852 aa17.26■□□□□ 0.35
COPS7A-218ENST00000543939 YIPF5Q969M3 257 aa17.26■□□□□ 0.35
COPS7A-218ENST00000543939 REEP6Q96HR9 211 aa17.26■□□□□ 0.35
COPS7A-218ENST00000543939 C1QTNF5Q9BXJ0 243 aa17.26■□□□□ 0.35
COPS7A-218ENST00000543939 LUZP4Q9P127 313 aa17.26■□□□□ 0.35
COPS7A-218ENST00000543939 LOC100509620A0A075B734 347 aa17.25■□□□□ 0.35
COPS7A-218ENST00000543939 FUOMA2VDF0 154 aa17.25■□□□□ 0.35
COPS7A-218ENST00000543939 DHRS7CA6NNS2 312 aa17.25■□□□□ 0.35
COPS7A-218ENST00000543939 ALDOBP05062 364 aa17.25■□□□□ 0.35
COPS7A-218ENST00000543939 CD79AP11912 226 aa17.25■□□□□ 0.35
COPS7A-218ENST00000543939 KIR2DL2P43627 348 aaPredicted RBP17.25■□□□□ 0.35
COPS7A-218ENST00000543939 DGCR2P98153 550 aa17.25■□□□□ 0.35
COPS7A-218ENST00000543939 TMEM69Q5SWH9 247 aa17.25■□□□□ 0.35
COPS7A-218ENST00000543939 HACD4Q5VWC8 232 aa17.25■□□□□ 0.35
COPS7A-218ENST00000543939 OR2A2Q6IF42 318 aa17.25■□□□□ 0.35
COPS7A-218ENST00000543939 TMEM53Q6P2H8 277 aa17.25■□□□□ 0.35
COPS7A-218ENST00000543939 ZNF585AQ6P3V2 769 aa17.25■□□□□ 0.35
COPS7A-218ENST00000543939 COLCA1Q6ZS62 124 aa17.25■□□□□ 0.35
COPS7A-218ENST00000543939 BIVMQ86UB2 503 aa17.25■□□□□ 0.35
COPS7A-218ENST00000543939 OR2AE1Q8NHA4 323 aa17.25■□□□□ 0.35
COPS7A-218ENST00000543939 EXTL1Q92935 676 aa17.25■□□□□ 0.35
COPS7A-218ENST00000543939 SLC22A4Q9H015 551 aa17.25■□□□□ 0.35
COPS7A-218ENST00000543939 ZNF391Q9UJN7 358 aa17.25■□□□□ 0.35
COPS7A-218ENST00000543939 IGKV1-9A0A0C4DH69 117 aa17.24■□□□□ 0.35
COPS7A-218ENST00000543939 CTAG2O75638 210 aa17.24■□□□□ 0.35
COPS7A-218ENST00000543939 ALX3O95076 343 aa17.24■□□□□ 0.35
COPS7A-218ENST00000543939 SLC34A2O95436 690 aa17.24■□□□□ 0.35
COPS7A-218ENST00000543939 FAHP16930 419 aa17.24■□□□□ 0.35
COPS7A-218ENST00000543939 HOXD11P31277 338 aaPredicted RBP17.24■□□□□ 0.35
COPS7A-218ENST00000543939 INPP1P49441 399 aa17.24■□□□□ 0.35
COPS7A-218ENST00000543939 BCAP31P51572 246 aa17.24■□□□□ 0.35
COPS7A-218ENST00000543939 CAPZA1P52907 286 aa17.24■□□□□ 0.35
COPS7A-218ENST00000543939 RAB1AP62820 205 aa17.24■□□□□ 0.35
COPS7A-218ENST00000543939 HIKESHIQ53FT3 197 aa17.24■□□□□ 0.35
COPS7A-218ENST00000543939 UTS2BQ765I0 119 aa17.24■□□□□ 0.35
COPS7A-218ENST00000543939 SSC4DQ8WTU2 575 aa17.24■□□□□ 0.35
COPS7A-218ENST00000543939 SMIM4Q8WVI0 70 aa17.24■□□□□ 0.35
COPS7A-218ENST00000543939 PP6455Q8WZ26 134 aa17.24■□□□□ 0.35
COPS7A-218ENST00000543939 NEDD4LQ96PU5 975 aa17.24■□□□□ 0.35
COPS7A-218ENST00000543939 RGCCQ9H4X1 137 aa17.24■□□□□ 0.35
COPS7A-218ENST00000543939 PIGLQ9Y2B2 252 aa17.24■□□□□ 0.35
COPS7A-218ENST00000543939 SVILO95425 2214 aa17.24■□□□□ 0.35
COPS7A-218ENST00000543939 XRCC3O43542 346 aa17.24■□□□□ 0.35
COPS7A-218ENST00000543939 PRF1P14222 555 aa17.24■□□□□ 0.35
COPS7A-218ENST00000543939 ZNF93P35789 620 aaPredicted RBP17.24■□□□□ 0.35
COPS7A-218ENST00000543939 TAS2R20P59543 309 aa17.24■□□□□ 0.35
COPS7A-218ENST00000543939 SF3B4Q15427 424 aaKnown RBP eCLIP17.24■□□□□ 0.35
COPS7A-218ENST00000543939 ZNF57Q68EA5 555 aaPredicted RBP17.24■□□□□ 0.35
COPS7A-218ENST00000543939 RNF144BQ7Z419 303 aa17.24■□□□□ 0.35
COPS7A-218ENST00000543939 OR6K3Q8NGY3 331 aa17.24■□□□□ 0.35
COPS7A-218ENST00000543939 CHST5Q9GZS9 411 aa17.24■□□□□ 0.35
COPS7A-218ENST00000543939 MGAQ8IWI9 3026 aa17.23■□□□□ 0.35
COPS7A-218ENST00000543939 CIB4A0PJX0 185 aa17.23■□□□□ 0.35
COPS7A-218ENST00000543939 PFDN1O60925 122 aa17.23■□□□□ 0.35
COPS7A-218ENST00000543939 CNOT4O95628 575 aaKnown RBP17.23■□□□□ 0.35
COPS7A-218ENST00000543939 CD3GP09693 182 aa17.23■□□□□ 0.35
COPS7A-218ENST00000543939 EDN3P14138 238 aa17.23■□□□□ 0.35
COPS7A-218ENST00000543939 GABRA1P14867 456 aa17.23■□□□□ 0.35
COPS7A-218ENST00000543939 IGHV1-2P23083 117 aa17.23■□□□□ 0.35
COPS7A-218ENST00000543939 ACKR3P25106 362 aa17.23■□□□□ 0.35
COPS7A-218ENST00000543939 MAP2K3P46734 347 aa17.23■□□□□ 0.35
COPS7A-218ENST00000543939 TNK1Q13470 666 aa17.23■□□□□ 0.35
COPS7A-218ENST00000543939 TBRG1Q3YBR2 411 aa17.23■□□□□ 0.35
COPS7A-218ENST00000543939 KRTCAP3Q53RY4 240 aa17.23■□□□□ 0.35
COPS7A-218ENST00000543939 ZNF324BQ6AW86 544 aaPredicted RBP17.23■□□□□ 0.35
COPS7A-218ENST00000543939 MYO7BQ6PIF6 2116 aa17.23■□□□□ 0.35
COPS7A-218ENST00000543939 CNEP1R1Q8N9A8 125 aa17.23■□□□□ 0.35
COPS7A-218ENST00000543939 SEMA6DQ8NFY4 1073 aa17.23■□□□□ 0.35
COPS7A-218ENST00000543939 C15orf40Q8WUR7 153 aa17.23■□□□□ 0.35
COPS7A-218ENST00000543939 PTX4Q96A99 478 aa17.23■□□□□ 0.35
COPS7A-218ENST00000543939 ANKRD11Q6UB99 2663 aaPredicted RBP17.23■□□□□ 0.35
COPS7A-218ENST00000543939 MBD3L4A6NDZ8 208 aaPredicted RBP17.22■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms